NonredundantMotifs:45

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known45
• db :HOCOMOCO
• Id :MAFA_f1
• name  :
• score :1.339045858542075
  
• External refs:

EntrezGene:389692
UniProt:389692

• Internal refs:

EntrezGene:389692

Motif matrix

P0 A C G T 1 2.712189616252821 9.66027088036117 9.965011286681722 4.662528216704289 2 2.803611738148992 0.0 7.557562076749425 16.638826185101586 3 0.8532731376975159 0.8532731376975159 20.966139954853283 4.327313769751698 4 0.0 26.57336343115124 0.42663656884875933 0.0 5 2.498871331828443 0.0 0.0 24.50112866817156 6 0.0 2.681715575620766 24.318284424379247 0.0 7 19.32054176072234 2.803611738148992 0.42663656884875933 4.449209932279908 8 4.022573363431146 16.029345372460508 3.717832957110621 3.2302483069977543 9 0.0 10.300225733634313 9.812641083521445 6.887133182844243 10 8.776523702031605 12.37246049661399 0.9751693002257339 4.87584650112867 11 4.510158013544014 10.178329571106103 3.169300225733622 9.142212189616263 12 0.9751693002257339 4.144469525959356 18.101580135440184 3.778781038374726 13 2.1941309255079013 16.638826185101586 1.82844243792325 6.338600451467271 14 17.91873589164784 2.255079006772009 2.1941309255079013 4.632054176072223 15 6.643340857787823 3.9006772009029356 13.713318284424382 2.7426636568848872 16 2.255079006772009 14.566591422121904 1.82844243792325 8.349887133182845 17 6.826185101580137 10.726862302483074 0.0 9.446952595936787 18 4.022573363431146 3.5959367945823844 2.803611738148992 16.577878103837477 19 2.255079006772009 9.264108352144472 2.1941309255079013 13.28668171557562 20 3.047404063205412 17.55304740406321 2.3769751693002243 4.022573363431146 21 6.765237020316033 8.593679458239263 8.7155756207675 2.925507900677202