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NonredundantMotifs:82

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant82
  • db :UNIPROBE
  • Id :Zic2_secondary
  • name :SCI09
  • score :0.28385848000944897
  • External refs:
EntrezGene:7546
UniProt:7546

  • Internal refs:
EntrezGene:7546


Motif matrix
P0ACGT
10.2015221930677030.3368450146781940.1837403895870640.277892402667039
20.2387049493818270.354378434390970.1653317320624920.241584884164711
30.3508579020479590.03142704820304790.3084818951328620.309233154616131
40.1044233030257660.8707935142531590.01867646610556010.00610671661551557
50.3132458106753510.2599435934672580.2775695908914930.149241004965898
60.003589941956051070.9733769729453080.002520233395219490.0205128517034213
70.8997160965257590.02548907940552580.0154584061944320.0593364178742831
80.04922436324225610.006414702001091690.9382142778711090.00614665688554373
90.002020973394895140.8596310777473460.007902985169728870.13044496368803
100.7728175125927190.00265857038161940.1873337179582740.0371901990673872
110.008455562310470150.01517033980915890.5946946421103730.381679455769998
120.004118200788785550.009187652950479110.9615058431453460.0251883031153892
130.367151242445380.2309551463636520.2044749604321730.197418650758795
140.2675079055481990.193660285798180.4300695055073870.108762303146235
150.4444489141507720.09912746777972650.2121823029570550.244241315112447

Sub Motif Members