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MCL coexpression mm9:74

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Phase1 CAGE Peaks

 Short description
Mm9::chr10:24507573..24507582,-p@chr10:24507573..24507582
-
Mm9::chr10:24555971..24555987,-p1@Enpp3
Mm9::chr11:109333894..109333905,-p14@Slc16a6
Mm9::chr11:109333925..109333953,-p11@Slc16a6
Mm9::chr11:115196102..115196163,+p1@Otop3
Mm9::chr11:120535011..120535030,+p6@Aspscr1
Mm9::chr11:120924615..120924633,-p3@Sectm1b
Mm9::chr11:78279085..78279098,+p4@Slc46a1
Mm9::chr11:78279169..78279191,+p2@Slc46a1
Mm9::chr11:78279199..78279237,+p1@Slc46a1
Mm9::chr11:94063508..94063517,-p@chr11:94063508..94063517
-
Mm9::chr11:95698891..95698898,-p@chr11:95698891..95698898
-
Mm9::chr11:95936681..95936716,-p@chr11:95936681..95936716
-
Mm9::chr13:114560102..114560108,-p@chr13:114560102..114560108
-
Mm9::chr13:19269774..19269799,+p1@uc007poq.1
Mm9::chr13:31530179..31530188,-p@chr13:31530179..31530188
-
Mm9::chr13:31531635..31531644,-p@chr13:31531635..31531644
-
Mm9::chr13:31533981..31534013,-p@chr13:31533981..31534013
-
Mm9::chr14:15535556..15535587,+p1@Slc4a7
Mm9::chr14:51575809..51575844,+p1@Pnp2
Mm9::chr14:67778077..67778094,+p@chr14:67778077..67778094
+
Mm9::chr16:33819763..33819780,+p@chr16:33819763..33819780
+
Mm9::chr16:33819793..33819805,+p@chr16:33819793..33819805
+
Mm9::chr16:48412521..48412534,-p1@Gm5485
Mm9::chr16:55816639..55816653,-p@chr16:55816639..55816653
-
Mm9::chr16:79091310..79091319,-p2@Tmprss15
Mm9::chr16:79091323..79091352,-p1@Tmprss15
Mm9::chr17:13187033..13187037,-p@chr17:13187033..13187037
-
Mm9::chr17:30552789..30552793,-p@chr17:30552789..30552793
-
Mm9::chr18:56547114..56547143,+p@chr18:56547114..56547143
+
Mm9::chr18:64351398..64351401,-p@chr18:64351398..64351401
-
Mm9::chr18:64494498..64494502,-p@chr18:64494498..64494502
-
Mm9::chr18:64499442..64499445,-p@chr18:64499442..64499445
-
Mm9::chr18:64499879..64499895,+p3@Onecut2
Mm9::chr18:64500223..64500240,+p@chr18:64500223..64500240
+
Mm9::chr18:64501996..64502033,-p@chr18:64501996..64502033
-
Mm9::chr19:10039120..10039128,-p@chr19:10039120..10039128
-
Mm9::chr19:10055172..10055187,+p@chr19:10055172..10055187
+
Mm9::chr19:29003713..29003727,-p3@4430402I18Rik
Mm9::chr19:32670272..32670289,+p1@Papss2
Mm9::chr19:32719633..32719650,+p@chr19:32719633..32719650
+
Mm9::chr19:39135488..39135505,+p1@Cyp2c65
Mm9::chr19:39188392..39188406,+p1@Cyp2c66
Mm9::chr19:55588734..55588745,+p@chr19:55588734..55588745
+
Mm9::chr19:5878622..5878644,+p2@Slc25a45
Mm9::chr19:6645146..6645151,+p@chr19:6645146..6645151
+
Mm9::chr1:107054430..107054437,-p@chr1:107054430..107054437
-
Mm9::chr1:107054443..107054459,-p@chr1:107054443..107054459
-
Mm9::chr1:107054473..107054482,-p@chr1:107054473..107054482
-
Mm9::chr1:165219345..165219366,-p7@Prrx1
Mm9::chr1:187255795..187255808,+p@chr1:187255795..187255808
+
Mm9::chr1:187278859..187278874,+p3@Slc30a10
Mm9::chr1:187278931..187278967,+p1@Slc30a10
Mm9::chr1:31073673..31073681,-p@chr1:31073673..31073681
-
Mm9::chr1:31073728..31073733,-p@chr1:31073728..31073733
-
Mm9::chr1:45983346..45983405,-p2@Slc40a1
Mm9::chr1:83034986..83034997,-p3@Slc19a3
Mm9::chr1:83035007..83035034,-p1@Slc19a3
Mm9::chr1:88994673..88994691,-p@chr1:88994673..88994691
-
Mm9::chr1:88995114..88995133,-p@chr1:88995114..88995133
-
Mm9::chr1:88995376..88995386,-p@chr1:88995376..88995386
-
Mm9::chr1:88995452..88995479,-p@chr1:88995452..88995479
-
Mm9::chr1:88995651..88995675,+p@chr1:88995651..88995675
+
Mm9::chr1:88995710..88995719,-p@chr1:88995710..88995719
-
Mm9::chr1:88995994..88996003,-p@chr1:88995994..88996003
-
Mm9::chr1:88996020..88996029,-p@chr1:88996020..88996029
-
Mm9::chr1:88996124..88996136,-p@chr1:88996124..88996136
-
Mm9::chr1:88996275..88996296,+p@chr1:88996275..88996296
+
Mm9::chr1:88996309..88996322,-p@chr1:88996309..88996322
-
Mm9::chr1:88996756..88996767,-p@chr1:88996756..88996767
-
Mm9::chr1:88996891..88996929,-p@chr1:88996891..88996929
-
Mm9::chr1:88997154..88997167,-p@chr1:88997154..88997167
-
Mm9::chr1:88997173..88997187,-p@chr1:88997173..88997187
-
Mm9::chr1:88998165..88998192,-p1@Alpi
Mm9::chr1:88998205..88998211,-p2@Alpi
Mm9::chr1:88998290..88998294,-p3@Alpi
Mm9::chr1:88998811..88998827,-p@chr1:88998811..88998827
-
Mm9::chr1:89021521..89021535,+p1@Akp3
Mm9::chr1:89021971..89021978,+p@chr1:89021971..89021978
+
Mm9::chr1:89022263..89022271,+p@chr1:89022263..89022271
+
Mm9::chr1:89022293..89022305,-p@chr1:89022293..89022305
-
Mm9::chr1:89022308..89022315,-p@chr1:89022308..89022315
-
Mm9::chr1:89022321..89022324,-p@chr1:89022321..89022324
-
Mm9::chr1:89022506..89022513,+p@chr1:89022506..89022513
+
Mm9::chr1:89022542..89022552,+p@chr1:89022542..89022552
+
Mm9::chr1:89022572..89022579,+p@chr1:89022572..89022579
+
Mm9::chr1:89022898..89022908,+p@chr1:89022898..89022908
+
Mm9::chr1:89023300..89023306,+p@chr1:89023300..89023306
+
Mm9::chr1:89023330..89023340,+p@chr1:89023330..89023340
+
Mm9::chr1:89023373..89023383,-p@chr1:89023373..89023383
-
Mm9::chr1:89023384..89023393,+p@chr1:89023384..89023393
+
Mm9::chr1:89023508..89023520,+p@chr1:89023508..89023520
+
Mm9::chr1:89023536..89023546,+p@chr1:89023536..89023546
+
Mm9::chr1:89023549..89023557,+p@chr1:89023549..89023557
+
Mm9::chr1:89023566..89023570,+p@chr1:89023566..89023570
+
Mm9::chr1:89023592..89023602,+p@chr1:89023592..89023602
+
Mm9::chr1:89023615..89023625,+p@chr1:89023615..89023625
+
Mm9::chr1:89023632..89023638,+p@chr1:89023632..89023638
+
Mm9::chr1:89023669..89023676,+p@chr1:89023669..89023676
+
Mm9::chr1:89023699..89023703,-p@chr1:89023699..89023703
-
Mm9::chr1:89023905..89023913,+p@chr1:89023905..89023913
+
Mm9::chr1:89023924..89023949,+p@chr1:89023924..89023949
+
Mm9::chr1:89023961..89023966,-p@chr1:89023961..89023966
-
Mm9::chr1:89023983..89023994,+p@chr1:89023983..89023994
+
Mm9::chr1:89024110..89024116,+p@chr1:89024110..89024116
+
Mm9::chr1:89024152..89024171,-p@chr1:89024152..89024171
-
Mm9::chr1:89024171..89024176,+p@chr1:89024171..89024176
+
Mm9::chr1:89024195..89024201,+p@chr1:89024195..89024201
+
Mm9::chr1:89024283..89024286,+p@chr1:89024283..89024286
+
Mm9::chr1:89024303..89024315,+p@chr1:89024303..89024315
+
Mm9::chr1:89024323..89024367,-p@chr1:89024323..89024367
-
Mm9::chr1:89024384..89024408,-p@chr1:89024384..89024408
-
Mm9::chr1:89024408..89024411,+p@chr1:89024408..89024411
+
Mm9::chr1:89024478..89024488,+p@chr1:89024478..89024488
+
Mm9::chr1:89024503..89024528,+p@chr1:89024503..89024528
+
Mm9::chr1:89024532..89024549,+p@chr1:89024532..89024549
+
Mm9::chr1:89024582..89024587,+p@chr1:89024582..89024587
+
Mm9::chr1:89024623..89024626,+p@chr1:89024623..89024626
+
Mm9::chr1:89024653..89024667,+p@chr1:89024653..89024667
+
Mm9::chr1:89024721..89024737,+p@chr1:89024721..89024737
+
Mm9::chr1:89024761..89024764,+p@chr1:89024761..89024764
+
Mm9::chr1:89024773..89024782,+p@chr1:89024773..89024782
+
Mm9::chr1:89024855..89024877,-p@chr1:89024855..89024877
-
Mm9::chr1:89024924..89024940,-p@chr1:89024924..89024940
-
Mm9::chr1:89024943..89024953,-p@chr1:89024943..89024953
-
Mm9::chr1:89024948..89024963,+p@chr1:89024948..89024963
+
Mm9::chr1:89025264..89025272,+p@chr1:89025264..89025272
+
Mm9::chr1:90034939..90034946,+p1@Ugt1a6a
Mm9::chr2:122221951..122221953,-p@chr2:122221951..122221953
-
Mm9::chr2:163556097..163556108,-p@chr2:163556097..163556108
-
Mm9::chr2:163575905..163575919,-p1@Ada
Mm9::chr2:75551077..75551096,-p@chr2:75551077..75551096
-
Mm9::chr2:75553101..75553106,+p@chr2:75553101..75553106
+
Mm9::chr3:107772080..107772095,-p1@Gstm3
Mm9::chr3:130545052..130545056,-p@chr3:130545052..130545056
-
Mm9::chr3:137976243..137976257,+p1@Adh6a
Mm9::chr3:73510581..73510592,-p@chr3:73510581..73510592
-
Mm9::chr4:108064054..108064066,+p@chr4:108064054..108064066
+
Mm9::chr4:153733851..153733868,-p@chr4:153733851..153733868
-
Mm9::chr4:55724573..55724578,+p@chr4:55724573..55724578
+
Mm9::chr4:61516822..61516827,-p@chr4:61516822..61516827
-
Mm9::chr5:101079655..101079663,+p@chr5:101079655..101079663
+
Mm9::chr5:124520651..124520676,+p@chr5:124520651..124520676
+
Mm9::chr5:138362840..138362856,-p1@Cyp3a13
Mm9::chr5:148047120..148047133,-p@chr5:148047120..148047133
-
Mm9::chr5:73731127..73731133,-p@chr5:73731127..73731133
-
Mm9::chr5:82230038..82230048,-p@chr5:82230038..82230048
-
Mm9::chr5:87853226..87853230,-p1@Ugt2b38
Mm9::chr6:108423061..108423076,+p@chr6:108423061..108423076
+
Mm9::chr6:115311132..115311147,+p9@Pparg
Mm9::chr6:128550081..128550085,-p@chr6:128550081..128550085
-
Mm9::chr6:129538136..129538144,+p@chr6:129538136..129538144
+
Mm9::chr6:142753013..142753031,-p1@Gm766
Mm9::chr6:24118083..24118097,-p1@Slc13a1
Mm9::chr6:34938438..34938455,-p@chr6:34938438..34938455
-
Mm9::chr7:111455656..111455660,-p@chr7:111455656..111455660
-
Mm9::chr7:111656326..111656350,-p1@Trim30d
Mm9::chr7:16957541..16957570,-p@chr7:16957541..16957570
-
Mm9::chr7:26682670..26682691,+p1@Cyp2b10
Mm9::chr7:57014909..57014933,+p3@Htatip2
Mm9::chr7:57014949..57014960,+p5@Htatip2
Mm9::chr7:88258146..88258158,+p@chr7:88258146..88258158
+
Mm9::chr7:88259685..88259694,+p2@Slc28a1
Mm9::chr8:107355491..107355498,+p3@Ces2b
Mm9::chr8:107355501..107355509,+p2@Ces2b
Mm9::chr8:107370961..107370979,+p1@Ces2c
Mm9::chr8:107524724..107524732,+p@chr8:107524724..107524732
+
Mm9::chr8:42101154..42101185,-p13@Mtus1
Mm9::chr8:42101649..42101675,-p10@Mtus1
Mm9::chr8:67653273..67653282,-p4@ENSMUST00000098713
Mm9::chr8:90642678..90642715,+p2@Tmem188
Mm9::chr9:100888368..100888379,-p@chr9:100888368..100888379
-
Mm9::chr9:100888395..100888423,-p@chr9:100888395..100888423
-
Mm9::chr9:108756891..108756902,-p@chr9:108756891..108756902
-
Mm9::chr9:108757861..108757868,+p@chr9:108757861..108757868
+
Mm9::chr9:108828617..108828637,+p@chr9:108828617..108828637
+
Mm9::chr9:54697871..54697875,-p@chr9:54697871..54697875
-
Mm9::chrX:109608875..109608890,+p1@2010106E10Rik
Mm9::chrX:109671733..109671742,+p@chrX:109671733..109671742
+


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0015103inorganic anion transmembrane transporter activity0.00514924822035792
GO:0005506iron ion binding0.00514924822035792
GO:0050381unspecific monooxygenase activity0.00514924822035792
GO:0004035alkaline phosphatase activity0.00521089416858834
GO:0016712oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen0.00521089416858834
GO:0022891substrate-specific transmembrane transporter activity0.00523803575981668
GO:0004497monooxygenase activity0.00680743923071851
GO:0015380anion exchanger activity0.00712892953292769
GO:0005542folic acid binding0.00712892953292769
GO:0022857transmembrane transporter activity0.00712892953292769
GO:0015106bicarbonate transmembrane transporter activity0.00712892953292769
GO:0015301anion:anion antiporter activity0.00712892953292769
GO:0000041transition metal ion transport0.00712892953292769
GO:0005792microsome0.00721642251051719
GO:0015108chloride transmembrane transporter activity0.00721642251051719
GO:0042598vesicular fraction0.00721642251051719
GO:0006812cation transport0.00721642251051719
GO:0006810transport0.00721642251051719
GO:0022892substrate-specific transporter activity0.00791433396164989
GO:0051234establishment of localization0.00791433396164989
GO:0022804active transmembrane transporter activity0.00791433396164989
GO:0006811ion transport0.00791433396164989
GO:0015291secondary active transmembrane transporter activity0.00791433396164989
GO:0016491oxidoreductase activity0.0124565273912681
GO:0051179localization0.0124565273912681
GO:0031975envelope0.0141690086600273
GO:0031967organelle envelope0.0141690086600273
GO:0030001metal ion transport0.016093860951146
GO:0005743mitochondrial inner membrane0.0167995100044327
GO:0019866organelle inner membrane0.0185470801125522
GO:0006826iron ion transport0.0185470801125522
GO:0015075ion transmembrane transporter activity0.0186670961025181
GO:0046872metal ion binding0.0186670961025181
GO:0008509anion transmembrane transporter activity0.0186670961025181
GO:0031966mitochondrial membrane0.0186670961025181
GO:0005624membrane fraction0.0193196957794729
GO:0043167ion binding0.0193196957794729
GO:0015886heme transport0.0193196957794729
GO:0015499formate transmembrane transporter activity0.0193196957794729
GO:0015851nucleobase transport0.0193196957794729
GO:0015724formate transport0.0193196957794729
GO:0015232heme transporter activity0.0193196957794729
GO:0015855pyrimidine transport0.0193196957794729
GO:0005740mitochondrial envelope0.0193196957794729
GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen0.0193196957794729
GO:0015297antiporter activity0.0246852861902725
GO:0000267cell fraction0.0271937295608852
GO:0044429mitochondrial part0.0271937295608852
GO:0031090organelle membrane0.0271937295608852
GO:0004781sulfate adenylyltransferase (ATP) activity0.0271937295608852
GO:0015234thiamin transmembrane transporter activity0.0271937295608852
GO:0015888thiamin transport0.0271937295608852
GO:0046021regulation of transcription from RNA polymerase II promoter, mitotic0.0271937295608852
GO:0050872white fat cell differentiation0.0271937295608852
GO:0004779sulfate adenylyltransferase activity0.0271937295608852
GO:0045896regulation of transcription, mitotic0.0271937295608852
GO:0015205nucleobase transmembrane transporter activity0.0271937295608852
GO:0006063uronic acid metabolic process0.0271937295608852
GO:0046022positive regulation of transcription from RNA polymerase II promoter, mitotic0.0271937295608852
GO:0019585glucuronate metabolic process0.0271937295608852
GO:0005350pyrimidine transmembrane transporter activity0.0271937295608852
GO:0045897positive regulation of transcription, mitotic0.0271937295608852
GO:0004020adenylylsulfate kinase activity0.0271937295608852
GO:0046914transition metal ion binding0.0282199347950114
GO:0006820anion transport0.0297706266492854
GO:0009117nucleotide metabolic process0.0351681350423161
GO:0009152purine ribonucleotide biosynthetic process0.0351681350423161
GO:0004322ferroxidase activity0.0351681350423161
GO:0051181cofactor transport0.0351681350423161
GO:0045600positive regulation of fat cell differentiation0.0351681350423161
GO:0004528phosphodiesterase I activity0.0351681350423161
GO:0016724oxidoreductase activity, oxidizing metal ions, oxygen as acceptor0.0351681350423161
GO:0008518reduced folate carrier activity0.0351681350423161
GO:0009260ribonucleotide biosynthetic process0.0387930557971987
GO:0055086nucleobase, nucleoside and nucleotide metabolic process0.0397211960290843
GO:0009150purine ribonucleotide metabolic process0.0412006989782975
GO:0006164purine nucleotide biosynthetic process0.0412006989782975
GO:0043169cation binding0.0412006989782975
GO:0000103sulfate assimilation0.0412006989782975
GO:0051180vitamin transport0.0412006989782975
GO:0005381iron ion transmembrane transporter activity0.0412006989782975
GO:0015701bicarbonate transport0.0412006989782975
GO:0006791sulfur utilization0.0412006989782975
GO:0009259ribonucleotide metabolic process0.0445872156103694
GO:0006163purine nucleotide metabolic process0.0490314300689815
GO:0004024alcohol dehydrogenase activity, zinc-dependent0.0496553565679924



Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)
MA0003.11.55277e-10
MA0004.10.000172544
MA0006.10.0107428
MA0007.10.0417552
MA0009.10.201569
MA0014.18.68441e-06
MA0017.15.0859
MA0019.10.58852
MA0024.10.0118581
MA0025.10.261209
MA0027.11.18181
MA0028.12.54244e-05
MA0029.12.22415
MA0030.10.286443
MA0031.10.406965
MA0038.10.804056
MA0040.10.4149
MA0041.10.0502547
MA0042.10.0390855
MA0043.10.0351016
MA0046.11.49711
MA0048.10.00195957
MA0050.10.35962
MA0051.10.179777
MA0052.10.225752
MA0055.10.00476666
MA0056.10
MA0057.10.000428627
MA0058.15.78675e-05
MA0059.10.182615
MA0060.10.0447628
MA0061.10.00820666
MA0063.10
MA0066.10.149094
MA0067.10.121714
MA0068.11.20357
MA0069.10.0204737
MA0070.10.214573
MA0071.10.496588
MA0072.10.0802272
MA0073.123.2756
MA0074.12.18061
MA0076.10.000428971
MA0077.11.63861
MA0078.11.62589
MA0081.10.00283457
MA0083.11.33545
MA0084.10.319968
MA0087.10.266547
MA0088.10.660206
MA0089.10
MA0090.10.0573895
MA0091.10.897714
MA0092.12.50727
MA0093.13.64279e-05
MA0095.10
MA0098.10
MA0100.11.17781
MA0101.10.832453
MA0103.11.65183
MA0105.10.000200885
MA0106.10.0272808
MA0107.10.415115
MA0108.20.667237
MA0109.10
MA0111.10.190893
MA0113.10.00496429
MA0114.17.22832
MA0115.11.81587
MA0116.10.000815571
MA0117.10.528433
MA0119.12.51193
MA0122.10.572581
MA0124.10.323461
MA0125.10.524484
MA0130.10
MA0131.10.00241133
MA0132.10
MA0133.10
MA0135.11.05373
MA0136.10.337695
MA0139.11.59672
MA0140.12.05806
MA0141.13.06278
MA0142.10.098301
MA0143.10.0619672
MA0144.10.426342
MA0145.10.495494
MA0146.15.27647e-08
MA0147.10.0608985
MA0148.10.191893
MA0149.10.000143161
MA0062.21.71295e-05
MA0035.24.06179
MA0039.20.00212089
MA0138.21.04685
MA0002.21.00498
MA0137.20.427887
MA0104.20.0173852
MA0047.20.272804
MA0112.20.495426
MA0065.20.951665
MA0150.11.10912
MA0151.10
MA0152.10.0880859
MA0153.12.64866
MA0154.10.0199429
MA0155.10.566375
MA0156.10.284794
MA0157.10.168977
MA0158.10
MA0159.10.295324
MA0160.11.1611
MA0161.10
MA0162.17.07143e-08
MA0163.10.0606827
MA0164.11.71583
MA0080.20.419948
MA0018.20.0736584
MA0099.22.02111
MA0079.20
MA0102.20.358473
MA0258.10.248318
MA0259.10.0283893
MA0442.10
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