FFCP PHASE1:Hg19::chr11:64110226..64110239,+
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p5@CCDC88B |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_CCDC88B_5end |
| Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
| Association with transcript: | 23bp_to_ENST00000494566, uc001nzz.1_5end |
| EntrezGene: | 283234 |
| HGNC: | 26757 |
| UniProt: | A6NC98 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p5@CCDC88B |
|---|
0
5
10
15
20
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| erythroid lineage cell | 1.36e-07 | 2 |
| erythroblast | 1.36e-07 | 2 |
| megakaryocyte-erythroid progenitor cell | 1.36e-07 | 2 |
| erythroid progenitor cell | 1.36e-07 | 2 |
| reticulocyte | 1.36e-07 | 2 |
| proerythroblast | 1.36e-07 | 2 |
| basophilic erythroblast | 1.36e-07 | 2 |
| polychromatophilic erythroblast | 1.36e-07 | 2 |
| orthochromatic erythroblast | 1.36e-07 | 2 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| middle frontal gyrus | 1.44e-25 | 2 |
| regional part of nervous system | 5.41e-22 | 53 |
| regional part of brain | 5.41e-22 | 53 |
| neural tube | 8.90e-21 | 56 |
| neural rod | 8.90e-21 | 56 |
| future spinal cord | 8.90e-21 | 56 |
| neural keel | 8.90e-21 | 56 |
| medulla oblongata | 1.51e-17 | 3 |
| myelencephalon | 1.51e-17 | 3 |
| future myelencephalon | 1.51e-17 | 3 |
Showing 1 to 10 of 54 entries
| Ontology term | p-value | n |
|---|---|---|
| squamous cell carcinoma | 1.84e-08 | 14 |
Showing 1 to 1 of 1 entries
