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Coexpression cluster:C65

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Full id: C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils



Phase1 CAGE Peaks

Hg19::chr10:106013923..106013945,+p2@GSTO1
Hg19::chr10:134143566..134143586,+p@chr10:134143566..134143586
+
Hg19::chr10:135106730..135106743,-p@chr10:135106730..135106743
-
Hg19::chr10:20107406..20107413,-p@chr10:20107406..20107413
-
Hg19::chr10:50396384..50396403,-p2@C10orf128
Hg19::chr10:50396407..50396424,-p3@C10orf128
Hg19::chr10:50396425..50396450,-p1@C10orf128
Hg19::chr10:5326456..5326474,-p@chr10:5326456..5326474
-
Hg19::chr10:5326485..5326513,-p@chr10:5326485..5326513
-
Hg19::chr10:81001828..81001846,+p@chr10:81001828..81001846
+
Hg19::chr10:81002081..81002137,+p@chr10:81002081..81002137
+
Hg19::chr10:81002418..81002443,+p@chr10:81002418..81002443
+
Hg19::chr10:81002444..81002451,+p@chr10:81002444..81002451
+
Hg19::chr10:81002459..81002470,+p@chr10:81002459..81002470
+
Hg19::chr10:81002490..81002499,+p@chr10:81002490..81002499
+
Hg19::chr10:81002562..81002621,+p@chr10:81002562..81002621
+
Hg19::chr10:81002638..81002652,+p@chr10:81002638..81002652
+
Hg19::chr10:81002662..81002681,+p@chr10:81002662..81002681
+
Hg19::chr10:81002783..81002848,+p@chr10:81002783..81002848
+
Hg19::chr10:81002901..81002909,+p@chr10:81002901..81002909
+
Hg19::chr10:81002927..81002938,+p14@ZMIZ1
Hg19::chr10:81028098..81028109,+p@chr10:81028098..81028109
+
Hg19::chr10:81028292..81028314,+p@chr10:81028292..81028314
+
Hg19::chr10:81030821..81030823,+p@chr10:81030821..81030823
+
Hg19::chr10:81034064..81034081,-p@chr10:81034064..81034081
-
Hg19::chr10:81036999..81037047,+p7@ZMIZ1
Hg19::chr10:81048292..81048324,+p@chr10:81048292..81048324
+
Hg19::chr10:81049531..81049547,+p@chr10:81049531..81049547
+
Hg19::chr10:81049616..81049623,+p@chr10:81049616..81049623
+
Hg19::chr10:81051907..81051935,+p@chr10:81051907..81051935
+
Hg19::chr10:81052746..81052768,+p@chr10:81052746..81052768
+
Hg19::chr10:81053101..81053113,+p@chr10:81053101..81053113
+
Hg19::chr10:81053128..81053171,+p@chr10:81053128..81053171
+
Hg19::chr10:81058206..81058225,+p@chr10:81058206..81058225
+
Hg19::chr10:81058659..81058670,+p@chr10:81058659..81058670
+
Hg19::chr10:81058684..81058709,+p@chr10:81058684..81058709
+
Hg19::chr10:81058729..81058759,+p@chr10:81058729..81058759
+
Hg19::chr10:81058831..81058838,+p@chr10:81058831..81058838
+
Hg19::chr10:81107216..81107237,+p1@PPIF
Hg19::chr10:81109447..81109460,+p4@PPIF
Hg19::chr10:81111293..81111304,+p@chr10:81111293..81111304
+
Hg19::chr10:81112062..81112114,+p@chr10:81112062..81112114
+
Hg19::chr10:81113608..81113707,+p@chr10:81113608..81113707
+
Hg19::chr10:81113718..81113778,+p@chr10:81113718..81113778
+
Hg19::chr10:81113959..81113978,+p@chr10:81113959..81113978
+
Hg19::chr11:121447503..121447533,+p9@SORL1
Hg19::chr11:121461068..121461086,+p13@SORL1
Hg19::chr11:124932986..124933018,+p2@SLC37A2
Hg19::chr11:46258933..46258943,+p@chr11:46258933..46258943
+
Hg19::chr11:61447622..61447639,+p3@DAGLA
Hg19::chr11:65150398..65150413,+p@chr11:65150398..65150413
+
Hg19::chr11:65780490..65780495,-p@chr11:65780490..65780495
-
Hg19::chr11:66384906..66384916,+p3@RBM14
Hg19::chr11:70172089..70172105,+p3@PPFIA1
Hg19::chr12:10320190..10320205,-p2@OLR1
Hg19::chr12:10339124..10339160,+p2@C12orf59
Hg19::chr12:125111152..125111184,+p@chr12:125111152..125111184
+
Hg19::chr12:48298765..48298783,-p2@VDR
Hg19::chr12:54767262..54767266,-p@chr12:54767262..54767266
-
Hg19::chr12:54778444..54778451,-p8@ZNF385A
Hg19::chr12:54783880..54783894,-p@chr12:54783880..54783894
-
Hg19::chr12:6658040..6658053,-p10@IFFO1
Hg19::chr12:6658208..6658243,-p5@IFFO1
Hg19::chr12:6659614..6659640,-p4@IFFO1
Hg19::chr12:6659665..6659674,-p9@IFFO1
Hg19::chr12:96588279..96588299,+p4@ELK3
Hg19::chr13:44453807..44453817,+p9@LACC1
Hg19::chr13:49144437..49144448,-p@chr13:49144437..49144448
-
Hg19::chr13:50202532..50202542,-p@chr13:50202532..50202542
-
Hg19::chr13:50202674..50202687,+p2@ARL11
Hg19::chr13:50216333..50216348,+p@chr13:50216333..50216348
+
Hg19::chr13:99127804..99127827,-p@chr13:99127804..99127827
-
Hg19::chr13:99127832..99127863,-p@chr13:99127832..99127863
-
Hg19::chr13:99965572..99965586,+p@chr13:99965572..99965586
+
Hg19::chr14:20943301..20943314,+p2@AF116670
Hg19::chr14:20943365..20943376,+p6@AF116670
Hg19::chr14:55602302..55602304,+p@chr14:55602302..55602304
+
Hg19::chr14:64971014..64971044,+p4@ZBTB1
Hg19::chr14:93099839..93099852,+p@chr14:93099839..93099852
+
Hg19::chr14:93099873..93099888,+p@chr14:93099873..93099888
+
Hg19::chr15:26029087..26029100,-p@chr15:26029087..26029100
-
Hg19::chr15:44085373..44085402,-p@chr15:44085373..44085402
-
Hg19::chr15:59980679..59980732,+p1@ENST00000560199
Hg19::chr15:75354653..75354657,+p@chr15:75354653..75354657
+
Hg19::chr15:90544013..90544051,+p@chr15:90544013..90544051
+
Hg19::chr15:90545434..90545449,+p9@ZNF710
Hg19::chr15:99993287..99993319,+p@chr15:99993287..99993319
+
Hg19::chr16:30727224..30727238,+p@chr16:30727224..30727238
+
Hg19::chr16:31370156..31370160,+p@chr16:31370156..31370160
+
Hg19::chr16:3639462..3639501,-p@chr16:3639462..3639501
-
Hg19::chr16:3639827..3639845,+p@chr16:3639827..3639845
+
Hg19::chr16:67144550..67144561,-p@chr16:67144550..67144561
-
Hg19::chr16:67144656..67144660,-p@chr16:67144656..67144660
-
Hg19::chr17:46080045..46080056,-p@chr17:46080045..46080056
-
Hg19::chr17:4643027..4643036,-p10@CXCL16
Hg19::chr17:47294661..47294681,+p@chr17:47294661..47294681
+
Hg19::chr17:4853442..4853471,+p5@ENO3
Hg19::chr17:57870826..57870837,+p@chr17:57870826..57870837
+
Hg19::chr17:60962303..60962306,+p@chr17:60962303..60962306
+
Hg19::chr17:72542140..72542151,-p5@CD300C
Hg19::chr17:72542163..72542182,-p2@CD300C
Hg19::chr17:73291973..73291990,+p@chr17:73291973..73291990
+
Hg19::chr17:73308280..73308291,-p@chr17:73308280..73308291
-
Hg19::chr17:73308311..73308326,-p@chr17:73308311..73308326
-
Hg19::chr17:74379267..74379297,+p4@SPHK1
Hg19::chr17:78835063..78835075,-p@chr17:78835063..78835075
-
Hg19::chr17:78866856..78866873,+p@chr17:78866856..78866873
+
Hg19::chr17:78866874..78866904,+p@chr17:78866874..78866904
+
Hg19::chr17:78866905..78866920,+p@chr17:78866905..78866920
+
Hg19::chr17:8124665..8124678,+p@chr17:8124665..8124678
+
Hg19::chr18:3449695..3449712,+p9@TGIF1
Hg19::chr18:3449720..3449749,+p2@TGIF1
Hg19::chr18:3449821..3449860,+p7@TGIF1
Hg19::chr19:11679245..11679256,-p@chr19:11679245..11679256
-
Hg19::chr19:11689066..11689084,-p@chr19:11689066..11689084
-
Hg19::chr19:11689256..11689267,+p@chr19:11689256..11689267
+
Hg19::chr19:11689281..11689296,+p@chr19:11689281..11689296
+
Hg19::chr19:11689297..11689311,+p@chr19:11689297..11689311
+
Hg19::chr19:11689518..11689533,-p9@ACP5
Hg19::chr19:11689547..11689564,-p6@ACP5
Hg19::chr19:11689913..11689921,+p@chr19:11689913..11689921
+
Hg19::chr19:11691549..11691554,-p@chr19:11691549..11691554
-
Hg19::chr19:12992190..12992203,-p4@DNASE2
Hg19::chr19:18284995..18285015,+p10@IFI30
Hg19::chr19:18288914..18288931,-p5@CU676849
p5@CU689079
Hg19::chr19:18291934..18291937,+p@chr19:18291934..18291937
+
Hg19::chr19:19051112..19051142,+p@chr19:19051112..19051142
+
Hg19::chr19:19064914..19064929,+p@chr19:19064914..19064929
+
Hg19::chr19:19496539..19496576,+p8@GATAD2A
Hg19::chr19:2271164..2271208,+p4@AF090094
Hg19::chr19:3136024..3136039,+p3@GNA15
Hg19::chr19:45240026..45240036,-p@chr19:45240026..45240036
-
Hg19::chr19:45245470..45245482,+p@chr19:45245470..45245482
+
Hg19::chr19:4553755..4553765,+p@chr19:4553755..4553765
+
Hg19::chr19:4553881..4553890,-p@chr19:4553881..4553890
-
Hg19::chr19:4553899..4553936,-p@chr19:4553899..4553936
-
Hg19::chr19:4553941..4554035,-p@chr19:4553941..4554035
-
Hg19::chr19:4554074..4554110,-p@chr19:4554074..4554110
-
Hg19::chr19:4554122..4554133,-p@chr19:4554122..4554133
-
Hg19::chr19:4554139..4554153,-p@chr19:4554139..4554153
-
Hg19::chr19:4554178..4554199,-p@chr19:4554178..4554199
-
Hg19::chr19:4554207..4554225,-p@chr19:4554207..4554225
-
Hg19::chr19:4554233..4554246,-p@chr19:4554233..4554246
-
Hg19::chr19:4554304..4554315,-p@chr19:4554304..4554315
-
Hg19::chr19:4554391..4554403,-p@chr19:4554391..4554403
-
Hg19::chr19:4555517..4555543,-p@chr19:4555517..4555543
-
Hg19::chr19:4557208..4557239,-p@chr19:4557208..4557239
-
Hg19::chr19:4559572..4559583,-p5@SEMA6B
Hg19::chr19:4559599..4559619,-p4@SEMA6B
Hg19::chr19:4559675..4559715,-p2@SEMA6B
Hg19::chr19:4559720..4559799,-p1@SEMA6B
Hg19::chr19:4559814..4559830,-p3@SEMA6B
Hg19::chr19:49377984..49378040,+p@chr19:49377984..49378040
+
Hg19::chr19:49465701..49465715,-p@chr19:49465701..49465715
-
Hg19::chr19:49469369..49469381,+p@chr19:49469369..49469381
+
Hg19::chr19:49469813..49469830,+p@chr19:49469813..49469830
+
Hg19::chr19:50432132..50432217,+p2@ATF5
Hg19::chr19:51631339..51631373,+p@chr19:51631339..51631373
+
Hg19::chr19:52264268..52264290,+p3@FPR2
Hg19::chr19:52307414..52307433,-p@chr19:52307414..52307433
-
Hg19::chr19:55385646..55385657,+p3@FCAR
Hg19::chr19:7556002..7556030,-p@chr19:7556002..7556030
-
Hg19::chr1:108592945..108592955,+p@chr1:108592945..108592955
+
Hg19::chr1:108593061..108593077,+p@chr1:108593061..108593077
+
Hg19::chr1:108593091..108593109,+p@chr1:108593091..108593109
+
Hg19::chr1:12252525..12252539,+p@chr1:12252525..12252539
+
Hg19::chr1:149901972..149901989,-p@chr1:149901972..149901989
-
Hg19::chr1:154422387..154422390,+p@chr1:154422387..154422390
+
Hg19::chr1:15479643..15479666,+p5@TMEM51
Hg19::chr1:155869427..155869441,-p@chr1:155869427..155869441
-
Hg19::chr1:181013908..181013945,+p@chr1:181013908..181013945
+
Hg19::chr1:212687665..212687673,+p@chr1:212687665..212687673
+
Hg19::chr1:244512513..244512546,+p@chr1:244512513..244512546
+
Hg19::chr1:244615163..244615196,-p2@ADSS
Hg19::chr1:25281902..25281921,+p@chr1:25281902..25281921
+
Hg19::chr1:25360722..25360754,+p@chr1:25360722..25360754
+
Hg19::chr1:25360757..25360774,+p@chr1:25360757..25360774
+
Hg19::chr1:25360780..25360795,+p@chr1:25360780..25360795
+
Hg19::chr1:25425897..25425914,-p@chr1:25425897..25425914
-
Hg19::chr1:27939332..27939345,-p@chr1:27939332..27939345
-
Hg19::chr1:45277688..45277721,+p@chr1:45277688..45277721
+
Hg19::chr20:2295693..2295700,-p@chr20:2295693..2295700
-
Hg19::chr20:25289627..25289655,-p@chr20:25289627..25289655
-
Hg19::chr20:48807648..48807671,+p9@CEBPB
Hg19::chr20:48876519..48876531,-p@chr20:48876519..48876531
-
Hg19::chr20:48909224..48909237,-p@chr20:48909224..48909237
-
Hg19::chr20:5054058..5054064,-p@chr20:5054058..5054064
-
Hg19::chr20:5070979..5071001,-p@chr20:5070979..5071001
-
Hg19::chr20:61192950..61192968,+p@chr20:61192950..61192968
+
Hg19::chr20:632324..632328,-p@chr20:632324..632328
-
Hg19::chr21:30565627..30565638,+p4@LINC00189
Hg19::chr21:30565654..30565682,+p2@LINC00189
Hg19::chr21:36259830..36259842,-p30@RUNX1
Hg19::chr22:35719490..35719507,+p5@TOM1
Hg19::chr22:35785133..35785148,+p@chr22:35785133..35785148
+
Hg19::chr22:46998103..46998127,-p@chr22:46998103..46998127
-
Hg19::chr2:119731876..119731935,+p@chr2:119731876..119731935
+
Hg19::chr2:158732905..158732920,-p@chr2:158732905..158732920
-
Hg19::chr2:169907514..169907530,+p@chr2:169907514..169907530
+
Hg19::chr2:169907540..169907551,+p@chr2:169907540..169907551
+
Hg19::chr2:169926127..169926143,+p2@DHRS9
Hg19::chr2:169926149..169926160,+p4@DHRS9
Hg19::chr2:198002072..198002083,-p@chr2:198002072..198002083
-
Hg19::chr2:218766698..218766769,-p5@TNS1
Hg19::chr2:219246728..219246739,+p6@SLC11A1
Hg19::chr2:219246746..219246759,+p5@SLC11A1
Hg19::chr2:219248811..219248852,+p8@SLC11A1
Hg19::chr2:219613974..219613992,+p@chr2:219613974..219613992
+
Hg19::chr2:230058497..230058500,-p@chr2:230058497..230058500
-
Hg19::chr2:230200207..230200230,+p@chr2:230200207..230200230
+
Hg19::chr2:241564655..241564668,+p3@GPR35
Hg19::chr2:241564889..241564932,+p1@GPR35
Hg19::chr2:241564946..241564955,+p5@GPR35
Hg19::chr2:58273760..58273846,+p2@VRK2
Hg19::chr2:58273887..58273898,+p5@VRK2
Hg19::chr2:58274320..58274344,+p@chr2:58274320..58274344
+
Hg19::chr2:58378901..58378906,+p@chr2:58378901..58378906
+
Hg19::chr2:91960539..91960551,+p@chr2:91960539..91960551
+
Hg19::chr2:91960553..91960566,+p@chr2:91960553..91960566
+
Hg19::chr3:192635973..192635996,-p2@MB21D2
Hg19::chr3:196065277..196065288,-p5@TM4SF19
Hg19::chr3:196065302..196065322,-p2@TM4SF19
Hg19::chr3:196065414..196065425,-p3@TM4SF19
Hg19::chr3:48603225..48603242,-p8@COL7A1
Hg19::chr3:48603660..48603676,-p@chr3:48603660..48603676
-
Hg19::chr3:52529994..52530017,+p@chr3:52529994..52530017
+
Hg19::chr3:98501953..98501955,+p7@ST3GAL6
Hg19::chr4:159092769..159092780,-p12@FAM198B
Hg19::chr4:185314233..185314269,-p@chr4:185314233..185314269
-
Hg19::chr4:2418461..2418476,+p@chr4:2418461..2418476
+
Hg19::chr4:2796691..2796709,+p@chr4:2796691..2796709
+
Hg19::chr4:2826871..2826888,+p11@SH3BP2
Hg19::chr4:681242..681274,+p@chr4:681242..681274
+
Hg19::chr4:84255980..84256009,-p1@HPSE
Hg19::chr5:131279764..131279771,-p@chr5:131279764..131279771
-
Hg19::chr5:135382258..135382274,+p29@TGFBI
Hg19::chr5:135382287..135382307,+p24@TGFBI
Hg19::chr5:135402548..135402562,+p@chr5:135402548..135402562
+
Hg19::chr5:156534012..156534066,-p10@HAVCR2
Hg19::chr5:169697858..169697883,-p@chr5:169697858..169697883
-
Hg19::chr5:177820148..177820162,-p@chr5:177820148..177820162
-
Hg19::chr5:180221221..180221227,-p@chr5:180221221..180221227
-
Hg19::chr5:180242534..180242560,-p7@MGAT1
Hg19::chr5:180245123..180245153,+p@chr5:180245123..180245153
+
Hg19::chr5:180258559..180258573,-p2@uc003mmj.1
Hg19::chr5:77805957..77805964,-p13@LHFPL2
Hg19::chr5:77806048..77806055,-p17@LHFPL2
Hg19::chr5:77806142..77806156,-p8@LHFPL2
Hg19::chr5:77806166..77806224,-p2@LHFPL2
Hg19::chr5:95158644..95158657,-p3@GLRX
Hg19::chr6:106535656..106535682,+p10@PRDM1
Hg19::chr6:106535687..106535706,+p8@PRDM1
Hg19::chr6:106535874..106535878,+p12@PRDM1
Hg19::chr6:106547367..106547394,+p@chr6:106547367..106547394
+
Hg19::chr6:106552921..106552933,+p@chr6:106552921..106552933
+
Hg19::chr6:116761121..116761127,+p@chr6:116761121..116761127
+
Hg19::chr6:15533961..15533988,-p8@DTNBP1
Hg19::chr6:15534018..15534039,-p7@DTNBP1
Hg19::chr6:166671395..166671415,-p@chr6:166671395..166671415
-
Hg19::chr6:29932741..29932763,-p@chr6:29932741..29932763
-
Hg19::chr6:6713323..6713329,-p@chr6:6713323..6713329
-
Hg19::chr7:141363135..141363146,+p@chr7:141363135..141363146
+
Hg19::chr7:151330150..151330157,-p29@PRKAG2
Hg19::chr7:151330169..151330179,-p20@PRKAG2
Hg19::chr7:151330181..151330212,-p3@PRKAG2
Hg19::chr7:151330218..151330259,-p6@PRKAG2
Hg19::chr7:151433703..151433708,+p@chr7:151433703..151433708
+
Hg19::chr7:2832799..2832806,+p@chr7:2832799..2832806
+
Hg19::chr7:39720934..39720937,+p@chr7:39720934..39720937
+
Hg19::chr9:115950834..115950848,-p6@FKBP15
Hg19::chr9:132101645..132101659,+p@chr9:132101645..132101659
+
Hg19::chr9:132106032..132106042,-p@chr9:132106032..132106042
-
Hg19::chr9:134530818..134530849,-p@chr9:134530818..134530849
-
Hg19::chr9:137264942..137264963,+p@chr9:137264942..137264963
+
Hg19::chr9:137264970..137264982,+p@chr9:137264970..137264982
+
Hg19::chrX:150565253..150565267,+p3@VMA21
Hg19::chrX:153286067..153286101,-p@chrX:153286067..153286101
-
Hg19::chrX:47436888..47436926,-p@chrX:47436888..47436926
-


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

No results for this coexpression

Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data

No GOStat results

Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>

Cell Type
Ontology termp-valuen

Uber Anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs



JASPAR motifs

Motifs-log10(p-value)

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ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data

No analysis results for this cluster

Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data

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