Personal tools

UBERON:0001262

From FANTOM5_SSTAR

Revision as of 17:12, 15 June 2012 by Autoedit (talk | contribs)
Jump to: navigation, search

Name:wall of intestine
Definition:"An anatomical wall that is part of a intestine [Obol]." [OBOL:automatic]
Xrefs:
links:

BTO:0000647
FMA:15949

MA:0002693
Synonyms: "anatomical wall of bowel" EXACT [OBOL:automatic]
"anatomical wall of intestine" EXACT [OBOL:automatic]
"bowel anatomical wall" EXACT [OBOL:automatic]
"bowel wall" EXACT [OBOL:automatic]
"intestinal wall" EXACT []
"intestine anatomical wall" EXACT [OBOL:automatic]
"intestine wall" EXACT []
"wall of bowel" EXACT [OBOL:automatic]
Comments:This class was created automatically from a combination of ontologies
Alt_id: UBERON:FMA_15949-MA_0002693

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000060(anatomical wall),UBERON:0004119(endoderm-derived structure)
part_of:UBERON:0000160(intestine)



Children

is a:UBERON:0001168 (wall of small intestine)
part of:UBERON:0001242 (intestinal mucosa)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001262 (wall of intestine), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.55e-98FFCP PHASE2:Hg19::chr9:35801527..35801540,+#_857e3a6d69d70eaa0fb38cc92541ff78p@chr9:35801527..35801540, +
1.55e-98FFCP PHASE1:Hg19::chr9:35801527..35801540,+#_857e3a6d69d70eaa0fb38cc92541ff78p@chr9:35801527..35801540, +
2.4e-66FFCP PHASE1:Hg19::chr2:127873614..127873626,+#_4e6f425f36472563d19b0d236cb983d4p@chr2:127873614..127873626, +
2.4e-66FFCP PHASE1:Hg19::chr1:111023361..111023366,+#_4e6f425f36472563d19b0d236cb983d4p1@CYMP
2.4e-66FFCP PHASE1:Hg19::chr18:7034928..7034943,-#_4e6f425f36472563d19b0d236cb983d4p@chr18:7034928..7034943, -
2.4e-66FFCP PHASE2:Hg19::chr2:127873614..127873626,+#_4e6f425f36472563d19b0d236cb983d4p@chr2:127873614..127873626, +
2.4e-66FFCP PHASE2:Hg19::chr1:111023361..111023366,+#_4e6f425f36472563d19b0d236cb983d4p1@CYMP
2.4e-66FFCP PHASE1:Hg19::chr13:46093155..46093164,+#_4e6f425f36472563d19b0d236cb983d4p@chr13:46093155..46093164, +
2.4e-66FFCP PHASE2:Hg19::chr6:22919616..22919625,-#_4e6f425f36472563d19b0d236cb983d4p@chr6:22919616..22919625, -
2.4e-66FFCP PHASE2:Hg19::chr13:46093155..46093164,+#_4e6f425f36472563d19b0d236cb983d4p@chr13:46093155..46093164, +
2.4e-66FFCP PHASE2:Hg19::chr18:7034928..7034943,-#_4e6f425f36472563d19b0d236cb983d4p@chr18:7034928..7034943, -
2.4e-66FFCP PHASE2:Hg19::chr9:129830560..129830568,+#_4e6f425f36472563d19b0d236cb983d4p@chr9:129830560..129830568, +
2.4e-66FFCP PHASE2:Hg19::chr7:117329764..117329777,+#_4e6f425f36472563d19b0d236cb983d4p1@ENST00000429014
2.4e-66FFCP PHASE1:Hg19::chr6:22919616..22919625,-#_4e6f425f36472563d19b0d236cb983d4p@chr6:22919616..22919625, -
2.4e-66FFCP PHASE1:Hg19::chr9:129830560..129830568,+#_4e6f425f36472563d19b0d236cb983d4p@chr9:129830560..129830568, +
2.4e-66FFCP PHASE1:Hg19::chr7:117329764..117329777,+#_4e6f425f36472563d19b0d236cb983d4p1@ENST00000429014
3.35e-66FFCP PHASE1:Hg19::chr2:205409703..205409714,+#_841ae4c2d47b68a9e23bee7d35addac6p@chr2:205409703..205409714, +
3.35e-66FFCP PHASE2:Hg19::chrX:21849506..21849512,-#_841ae4c2d47b68a9e23bee7d35addac6p@chrX:21849506..21849512, -
3.35e-66FFCP PHASE2:Hg19::chr2:205409703..205409714,+#_841ae4c2d47b68a9e23bee7d35addac6p@chr2:205409703..205409714, +
3.35e-66FFCP PHASE1:Hg19::chr1:6420713..6420725,-#_841ae4c2d47b68a9e23bee7d35addac6p16@ACOT7
3.35e-66FFCP PHASE2:Hg19::chr1:6420713..6420725,-#_841ae4c2d47b68a9e23bee7d35addac6p16@ACOT7
3.35e-66FFCP PHASE1:Hg19::chrX:21849506..21849512,-#_841ae4c2d47b68a9e23bee7d35addac6p@chrX:21849506..21849512, -
3.35e-66FFCP PHASE1:Hg19::chr20:17691468..17691474,-#_841ae4c2d47b68a9e23bee7d35addac6p@chr20:17691468..17691474, -
3.35e-66FFCP PHASE2:Hg19::chr20:17691468..17691474,-#_841ae4c2d47b68a9e23bee7d35addac6p@chr20:17691468..17691474, -
4.67e-66FFCP PHASE2:Hg19::chr9:138591077..138591111,-#_02cdbf82db2c1464b01c68c1af1128a8p@chr9:138591077..138591111, -
4.67e-66FFCP PHASE2:Hg19::chr11:89925073..89925074,+#_02cdbf82db2c1464b01c68c1af1128a8p@chr11:89925073..89925074, +
4.67e-66FFCP PHASE1:Hg19::chr2:28340361..28340371,+#_02cdbf82db2c1464b01c68c1af1128a8p@chr2:28340361..28340371, +
4.67e-66FFCP PHASE1:Hg19::chr9:138591077..138591111,-#_02cdbf82db2c1464b01c68c1af1128a8p@chr9:138591077..138591111, -
4.67e-66FFCP PHASE2:Hg19::chr2:28340361..28340371,+#_02cdbf82db2c1464b01c68c1af1128a8p@chr2:28340361..28340371, +
4.67e-66FFCP PHASE1:Hg19::chr11:89925073..89925074,+#_02cdbf82db2c1464b01c68c1af1128a8p@chr11:89925073..89925074, +
3.83e-60FFCP PHASE2:Mm9::chr16:30055801..30055806,+#_1202225f8b9bd29ad9081f62f08a966bp@chr16:30055801..30055806, +
3.83e-60FFCP PHASE1:Mm9::chr16:30055801..30055806,+#_1202225f8b9bd29ad9081f62f08a966bp@chr16:30055801..30055806, +
3.16e-55FFCP PHASE2:Mm9::chr3:122215917..122215967,-#_d58a338f63792a6a6b4ca6c959e8ecbap@chr3:122215917..122215967, -
3.16e-55FFCP PHASE1:Mm9::chr3:122215917..122215967,-#_d58a338f63792a6a6b4ca6c959e8ecbap@chr3:122215917..122215967, -
1.47e-53FFCP PHASE1:Mm9::chr18:75457242..75457248,+#_9baa89bed6272fd363cc835cc45aa5c6p@chr18:75457242..75457248, +
1.47e-53FFCP PHASE2:Mm9::chr18:75457242..75457248,+#_9baa89bed6272fd363cc835cc45aa5c6p@chr18:75457242..75457248, +
1.5e-53FFCP PHASE1:Mm9::chr5:135442349..135442362,-#_bc36e624b728eb23387a65a1d9cfbf97p@chr5:135442349..135442362, -
1.5e-53FFCP PHASE2:Mm9::chr5:135442349..135442362,-#_bc36e624b728eb23387a65a1d9cfbf97p@chr5:135442349..135442362, -
1.94e-53FFCP PHASE1:Mm9::chr8:122335239..122335244,+#_d90d14e24d624456335f914166d7e128p@chr8:122335239..122335244, +
1.94e-53FFCP PHASE2:Mm9::chr8:122335239..122335244,+#_d90d14e24d624456335f914166d7e128p@chr8:122335239..122335244, +
7.2e-52FFCP PHASE1:Mm9::chr18:61795043..61795050,-#_a5c43b89845f6aa59f7359efbf8aea9ep@chr18:61795043..61795050, -
7.2e-52FFCP PHASE2:Mm9::chr18:61795043..61795050,-#_a5c43b89845f6aa59f7359efbf8aea9ep@chr18:61795043..61795050, -
1.66e-51FFCP PHASE2:Mm9::chr7:4101973..4101978,-#_576f814a674b48bfb86543f9312764cbp4@Leng9
1.66e-51FFCP PHASE1:Mm9::chr7:4101973..4101978,-#_576f814a674b48bfb86543f9312764cbp4@Leng9
3.1e-50FFCP PHASE2:Hg19::chr2:127711472..127711475,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr2:127711472..127711475, +
3.1e-50FFCP PHASE1:Hg19::chr5:71987749..71987774,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr5:71987749..71987774, -
3.1e-50FFCP PHASE2:Hg19::chr18:28720966..28720970,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr18:28720966..28720970, +
3.1e-50FFCP PHASE2:Hg19::chr12:77730114..77730120,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr12:77730114..77730120, -
3.1e-50FFCP PHASE1:Hg19::chr7:141499716..141499722,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr7:141499716..141499722, +
3.1e-50FFCP PHASE1:Hg19::chr6:5491081..5491106,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr6:5491081..5491106, +
3.1e-50FFCP PHASE1:Hg19::chr21:37143915..37143924,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr21:37143915..37143924, -
3.1e-50FFCP PHASE2:Hg19::chr7:87232419..87232430,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr7:87232419..87232430, -
3.1e-50FFCP PHASE2:Hg19::chr2:163302780..163302789,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr2:163302780..163302789, -
3.1e-50FFCP PHASE1:Hg19::chr4:157174324..157174332,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr4:157174324..157174332, +
3.1e-50FFCP PHASE2:Hg19::chr3:171088092..171088113,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr3:171088092..171088113, -
3.1e-50FFCP PHASE2:Hg19::chr10:24726466..24726472,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr10:24726466..24726472, +
3.1e-50FFCP PHASE1:Hg19::chr3:66354424..66354472,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr3:66354424..66354472, +
3.1e-50FFCP PHASE1:Hg19::chr13:32790683..32790693,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr13:32790683..32790693, +
3.1e-50FFCP PHASE1:Hg19::chr7:97958802..97958804,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr7:97958802..97958804, -
3.1e-50FFCP PHASE1:Hg19::chr1:198324742..198324745,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr1:198324742..198324745, +
3.1e-50FFCP PHASE2:Hg19::chr8:127568784..127568794,+#_e3f4ae0417f6c971b473e930dbc3ba2cp6@ENST00000524320
3.1e-50FFCP PHASE1:Hg19::chr1:55404829..55404833,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr1:55404829..55404833, -
3.1e-50FFCP PHASE1:Hg19::chr2:66794389..66794398,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr2:66794389..66794398, +
3.1e-50FFCP PHASE2:Hg19::chr9:98505341..98505348,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr9:98505341..98505348, +
3.1e-50FFCP PHASE2:Hg19::chr3:24797832..24797838,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr3:24797832..24797838, -
3.1e-50FFCP PHASE2:Hg19::chr6:372660..372670,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr6:372660..372670, -
3.1e-50FFCP PHASE2:Hg19::chr13:32790683..32790693,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr13:32790683..32790693, +
3.1e-50FFCP PHASE1:Hg19::chr3:140054665..140054678,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr3:140054665..140054678, -
3.1e-50FFCP PHASE1:Hg19::chr12:65466889..65466894,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr12:65466889..65466894, -
3.1e-50FFCP PHASE1:Hg19::chr6:8389389..8389429,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr6:8389389..8389429, -
3.1e-50FFCP PHASE2:Hg19::chr8:127438794..127438800,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr8:127438794..127438800, +
3.1e-50FFCP PHASE2:Hg19::chr6:91774965..91774974,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr6:91774965..91774974, +
3.1e-50FFCP PHASE1:Hg19::chr8:127817393..127817400,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr8:127817393..127817400, +
3.1e-50FFCP PHASE2:Hg19::chr4:157174324..157174332,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr4:157174324..157174332, +
3.1e-50FFCP PHASE1:Hg19::chr2:43616324..43616335,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr2:43616324..43616335, -
3.1e-50FFCP PHASE1:Hg19::chr16:19661585..19661596,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr16:19661585..19661596, +
3.1e-50FFCP PHASE2:Hg19::chr2:66794389..66794398,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr2:66794389..66794398, +
3.1e-50FFCP PHASE1:Hg19::chrX:42162203..42162241,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chrX:42162203..42162241, +
3.1e-50FFCP PHASE1:Hg19::chr4:169559850..169559856,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr4:169559850..169559856, -
3.1e-50FFCP PHASE2:Hg19::chr9:125898916..125898941,-#_e3f4ae0417f6c971b473e930dbc3ba2cp14@STRBP
3.1e-50FFCP PHASE2:Hg19::chr1:198324742..198324745,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr1:198324742..198324745, +
3.1e-50FFCP PHASE2:Hg19::chr8:128415915..128415922,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr8:128415915..128415922, +
3.1e-50FFCP PHASE2:Hg19::chr1:55404829..55404833,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr1:55404829..55404833, -
3.1e-50FFCP PHASE2:Hg19::chr15:45950558..45950561,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr15:45950558..45950561, +
3.1e-50FFCP PHASE2:Hg19::chr2:43616324..43616335,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr2:43616324..43616335, -
3.1e-50FFCP PHASE2:Hg19::chr16:19661585..19661596,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr16:19661585..19661596, +
3.1e-50FFCP PHASE1:Hg19::chr4:157174023..157174034,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr4:157174023..157174034, +
3.1e-50FFCP PHASE2:Hg19::chr9:104610923..104610939,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr9:104610923..104610939, -
3.1e-50FFCP PHASE2:Hg19::chr5:97747048..97747059,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr5:97747048..97747059, +
3.1e-50FFCP PHASE2:Hg19::chr14:22850283..22850310,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr14:22850283..22850310, -
3.1e-50FFCP PHASE2:Hg19::chr10:2328652..2328660,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr10:2328652..2328660, +
3.1e-50FFCP PHASE1:Hg19::chr7:87232419..87232430,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr7:87232419..87232430, -
3.1e-50FFCP PHASE1:Hg19::chr14:76289395..76289406,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr14:76289395..76289406, +
3.1e-50FFCP PHASE2:Hg19::chr3:148165064..148165071,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr3:148165064..148165071, -
3.1e-50FFCP PHASE2:Hg19::chr4:169559850..169559856,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr4:169559850..169559856, -
3.1e-50FFCP PHASE1:Hg19::chr8:128691603..128691614,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr8:128691603..128691614, -
3.1e-50FFCP PHASE1:Hg19::chr2:163302793..163302800,-#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr2:163302793..163302800, -
3.1e-50FFCP PHASE2:Hg19::chr6:8446968..8446983,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr6:8446968..8446983, +
3.1e-50FFCP PHASE1:Hg19::chr8:127568784..127568794,+#_e3f4ae0417f6c971b473e930dbc3ba2cp6@ENST00000524320
3.1e-50FFCP PHASE1:Hg19::chr10:24726466..24726472,+#_e3f4ae0417f6c971b473e930dbc3ba2cp@chr10:24726466..24726472, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0001262&oldid=1832595"