Personal tools

UBERON:0004178

From FANTOM5_SSTAR

Revision as of 17:20, 15 June 2012 by Autoedit (talk | contribs)
Jump to: navigation, search

Name:aorta smooth muscle tissue
Definition:"A portion of smooth muscle tissue that is part of an aorta [Obol]." [OBOL:automatic]
Xrefs:
links:

BTO:0001685
EFO:0002775
MA:0000702

ncithesaurus:Aorta_Smooth_Muscle_Tissue
Synonyms: "adult aorta involuntary muscle" EXACT [OBOL:automatic]
"adult aorta non-striated muscle" EXACT [OBOL:automatic]
"adult aorta smooth muscle" EXACT [OBOL:automatic]
"adult aorta smooth muscle tissue" EXACT [OBOL:automatic]
"aorta involuntary muscle" EXACT [OBOL:automatic]
"aorta non-striated muscle" EXACT [OBOL:automatic]
"aorta smooth muscle" EXACT [OBOL:automatic]
"aortic smooth muscle" EXACT [BTO:0001685]
"dorsal aorta involuntary muscle" EXACT [OBOL:automatic]
"dorsal aorta non-striated muscle" EXACT [OBOL:automatic]
"dorsal aorta smooth muscle" EXACT [OBOL:automatic]
"dorsal aorta smooth muscle tissue" EXACT [OBOL:automatic]
"involuntary muscle of adult aorta" EXACT [OBOL:automatic]
"involuntary muscle of aorta" EXACT [OBOL:automatic]
"involuntary muscle of dorsal aorta" EXACT [OBOL:automatic]
"involuntary muscle of trunk of aortic tree" EXACT [OBOL:automatic]
"non-striated muscle of adult aorta" EXACT [OBOL:automatic]
"non-striated muscle of aorta" EXACT [OBOL:automatic]
"non-striated muscle of dorsal aorta" EXACT [OBOL:automatic]
"non-striated muscle of trunk of aortic tree" EXACT [OBOL:automatic]
"smooth muscle of adult aorta" EXACT [OBOL:automatic]
"smooth muscle of aorta" EXACT [OBOL:automatic]
"smooth muscle of dorsal aorta" EXACT [OBOL:automatic]
"smooth muscle of trunk of aortic tree" EXACT [OBOL:automatic]
"smooth muscle tissue of adult aorta" EXACT [OBOL:automatic]
"smooth muscle tissue of aorta" EXACT [OBOL:automatic]
"smooth muscle tissue of dorsal aorta" EXACT [OBOL:automatic]
"smooth muscle tissue of trunk of aortic tree" EXACT [OBOL:automatic]
"trunk of aortic tree involuntary muscle" EXACT [OBOL:automatic]
"trunk of aortic tree non-striated muscle" EXACT [OBOL:automatic]
"trunk of aortic tree smooth muscle" EXACT [OBOL:automatic]
"trunk of aortic tree smooth muscle tissue" EXACT [OBOL:automatic]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0002111(artery smooth muscle tissue)
part_of:UBERON:0000947(aorta)



Children

part of:CL:0002539 (aortic smooth muscle cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004178 (aorta smooth muscle tissue), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.58e-86FFCP PHASE1:Mm9::chr11:50416871..50416882,+#_aa93aec0f787fecd4908bf412cd05595p5@Adamts2
1.58e-86FFCP PHASE2:Mm9::chr8:69228447..69228492,+#_aa93aec0f787fecd4908bf412cd05595p@chr8:69228447..69228492, +
1.58e-86FFCP PHASE2:Mm9::chr2:178190171..178190178,+#_aa93aec0f787fecd4908bf412cd05595p@chr2:178190171..178190178, +
1.58e-86FFCP PHASE1:Mm9::chr17:14827154..14827169,-#_aa93aec0f787fecd4908bf412cd05595p@chr17:14827154..14827169, -
1.58e-86FFCP PHASE1:Mm9::chr17:14802633..14802637,-#_aa93aec0f787fecd4908bf412cd05595p@chr17:14802633..14802637, -
1.58e-86FFCP PHASE2:Mm9::chr2:112043522..112043530,-#_aa93aec0f787fecd4908bf412cd05595p@chr2:112043522..112043530, -
1.58e-86FFCP PHASE2:Mm9::chr17:14827154..14827169,-#_aa93aec0f787fecd4908bf412cd05595p@chr17:14827154..14827169, -
1.58e-86FFCP PHASE2:Mm9::chr17:14802633..14802637,-#_aa93aec0f787fecd4908bf412cd05595p@chr17:14802633..14802637, -
1.58e-86FFCP PHASE2:Mm9::chrX:160839744..160839754,+#_aa93aec0f787fecd4908bf412cd05595p@chrX:160839744..160839754, +
1.58e-86FFCP PHASE1:Mm9::chr17:87574327..87574332,+#_aa93aec0f787fecd4908bf412cd05595p@chr17:87574327..87574332, +
1.58e-86FFCP PHASE2:Mm9::chr17:87574327..87574332,+#_aa93aec0f787fecd4908bf412cd05595p@chr17:87574327..87574332, +
1.58e-86FFCP PHASE1:Mm9::chr2:112043522..112043530,-#_aa93aec0f787fecd4908bf412cd05595p@chr2:112043522..112043530, -
1.58e-86FFCP PHASE1:Mm9::chr2:178190171..178190178,+#_aa93aec0f787fecd4908bf412cd05595p@chr2:178190171..178190178, +
1.58e-86FFCP PHASE1:Mm9::chrX:160839744..160839754,+#_aa93aec0f787fecd4908bf412cd05595p@chrX:160839744..160839754, +
1.58e-86FFCP PHASE1:Mm9::chr8:69228447..69228492,+#_aa93aec0f787fecd4908bf412cd05595p@chr8:69228447..69228492, +
1.58e-86FFCP PHASE2:Mm9::chr11:50416871..50416882,+#_aa93aec0f787fecd4908bf412cd05595p5@Adamts2
5.79e-79FFCP PHASE2:Hg19::chr1:110429102..110429103,+#_07fef3701ad04ff09089f0d1bb4396d9p@chr1:110429102..110429103, +
5.79e-79FFCP PHASE1:Hg19::chr1:110429102..110429103,+#_07fef3701ad04ff09089f0d1bb4396d9p@chr1:110429102..110429103, +
1.33e-65FFCP PHASE2:Mm9::chr11:118164535..118164544,-#_5fa7b6afb630343362c0a9a35f458745p@chr11:118164535..118164544, -
1.33e-65FFCP PHASE2:Mm9::chrX:160840025..160840037,+#_5fa7b6afb630343362c0a9a35f458745p@chrX:160840025..160840037, +
1.33e-65FFCP PHASE1:Mm9::chrX:160840025..160840037,+#_5fa7b6afb630343362c0a9a35f458745p@chrX:160840025..160840037, +
1.33e-65FFCP PHASE2:Mm9::chr6:128920492..128920498,-#_5fa7b6afb630343362c0a9a35f458745p@chr6:128920492..128920498, -
1.33e-65FFCP PHASE2:Mm9::chrX:160840048..160840057,+#_5fa7b6afb630343362c0a9a35f458745p@chrX:160840048..160840057, +
1.33e-65FFCP PHASE1:Mm9::chr6:128920492..128920498,-#_5fa7b6afb630343362c0a9a35f458745p@chr6:128920492..128920498, -
1.33e-65FFCP PHASE1:Mm9::chrX:160840048..160840057,+#_5fa7b6afb630343362c0a9a35f458745p@chrX:160840048..160840057, +
1.33e-65FFCP PHASE2:Mm9::chr17:71340031..71340044,-#_5fa7b6afb630343362c0a9a35f458745p5@Myl12b
1.33e-65FFCP PHASE1:Mm9::chr11:118164535..118164544,-#_5fa7b6afb630343362c0a9a35f458745p@chr11:118164535..118164544, -
1.33e-65FFCP PHASE1:Mm9::chr8:69221163..69221172,+#_5fa7b6afb630343362c0a9a35f458745p6@Npy1r
1.33e-65FFCP PHASE2:Mm9::chr8:69221163..69221172,+#_5fa7b6afb630343362c0a9a35f458745p6@Npy1r
1.33e-65FFCP PHASE1:Mm9::chr17:71340031..71340044,-#_5fa7b6afb630343362c0a9a35f458745p5@Myl12b
2.21e-65FFCP PHASE2:Mm9::chr4:145000183..145000220,+#_ce12a284e9b45329869df58daf326ce5p1@ENSMUST00000150529
2.21e-65FFCP PHASE1:Mm9::chr4:145000183..145000220,+#_ce12a284e9b45329869df58daf326ce5p1@ENSMUST00000150529
3.28e-58FFCP PHASE1:Mm9::chr14:24251697..24251707,+#_ba7fc9b0ea508f3f424713953404d046p@chr14:24251697..24251707, +
3.28e-58FFCP PHASE2:Mm9::chr17:14817013..14817022,-#_ba7fc9b0ea508f3f424713953404d046p@chr17:14817013..14817022, -
3.28e-58FFCP PHASE1:Mm9::chr8:69857155..69857159,+#_ba7fc9b0ea508f3f424713953404d046p@chr8:69857155..69857159, +
3.28e-58FFCP PHASE2:Mm9::chr8:69857155..69857159,+#_ba7fc9b0ea508f3f424713953404d046p@chr8:69857155..69857159, +
3.28e-58FFCP PHASE1:Mm9::chr10:96946110..96946113,+#_ba7fc9b0ea508f3f424713953404d046p@chr10:96946110..96946113, +
3.28e-58FFCP PHASE2:Mm9::chr10:96946110..96946113,+#_ba7fc9b0ea508f3f424713953404d046p@chr10:96946110..96946113, +
3.28e-58FFCP PHASE2:Mm9::chr14:24251697..24251707,+#_ba7fc9b0ea508f3f424713953404d046p@chr14:24251697..24251707, +
3.28e-58FFCP PHASE1:Mm9::chr17:87544959..87544962,+#_ba7fc9b0ea508f3f424713953404d046p@chr17:87544959..87544962, +
3.28e-58FFCP PHASE2:Mm9::chr17:87544959..87544962,+#_ba7fc9b0ea508f3f424713953404d046p@chr17:87544959..87544962, +
3.28e-58FFCP PHASE2:Mm9::chr17:78907550..78907557,+#_ba7fc9b0ea508f3f424713953404d046p8@Vit
3.28e-58FFCP PHASE2:Mm9::chrX:160839012..160839023,+#_ba7fc9b0ea508f3f424713953404d046p@chrX:160839012..160839023, +
3.28e-58FFCP PHASE1:Mm9::chr1:127573425..127573432,+#_ba7fc9b0ea508f3f424713953404d046p12@Gpr39
3.28e-58FFCP PHASE2:Mm9::chr1:127573425..127573432,+#_ba7fc9b0ea508f3f424713953404d046p12@Gpr39
3.28e-58FFCP PHASE1:Mm9::chr17:78907550..78907557,+#_ba7fc9b0ea508f3f424713953404d046p8@Vit
3.28e-58FFCP PHASE2:Mm9::chrX:160811352..160811356,-#_ba7fc9b0ea508f3f424713953404d046p@chrX:160811352..160811356, -
3.28e-58FFCP PHASE2:Mm9::chr10:33816181..33816195,-#_ba7fc9b0ea508f3f424713953404d046p@chr10:33816181..33816195, -
3.28e-58FFCP PHASE1:Mm9::chrX:160811352..160811356,-#_ba7fc9b0ea508f3f424713953404d046p@chrX:160811352..160811356, -
3.28e-58FFCP PHASE1:Mm9::chrX:160839012..160839023,+#_ba7fc9b0ea508f3f424713953404d046p@chrX:160839012..160839023, +
3.28e-58FFCP PHASE1:Mm9::chr17:14817013..14817022,-#_ba7fc9b0ea508f3f424713953404d046p@chr17:14817013..14817022, -
3.28e-58FFCP PHASE1:Mm9::chr10:33816181..33816195,-#_ba7fc9b0ea508f3f424713953404d046p@chr10:33816181..33816195, -
1.26e-55FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_dd0bc68edf90278e3583c5e49bc7b333p@chr6:53359400..53359406, +
1.26e-55FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_dd0bc68edf90278e3583c5e49bc7b333p@chr6:53359400..53359406, +
4.9e-53FFCP PHASE1:Mm9::chr7:91081998..91082010,-#_f0b5d0bb28fd4cccd49dd094fda065b1p@chr7:91081998..91082010, -
4.9e-53FFCP PHASE1:Mm9::chr10:67821185..67821217,-#_f0b5d0bb28fd4cccd49dd094fda065b1p@chr10:67821185..67821217, -
4.9e-53FFCP PHASE2:Mm9::chr10:67821185..67821217,-#_f0b5d0bb28fd4cccd49dd094fda065b1p@chr10:67821185..67821217, -
4.9e-53FFCP PHASE2:Mm9::chr2:113589030..113589077,-#_f0b5d0bb28fd4cccd49dd094fda065b1p@chr2:113589030..113589077, -
4.9e-53FFCP PHASE1:Mm9::chr17:29227828..29227839,-#_f0b5d0bb28fd4cccd49dd094fda065b1p@chr17:29227828..29227839, -
4.9e-53FFCP PHASE1:Mm9::chr14:24251717..24251731,+#_f0b5d0bb28fd4cccd49dd094fda065b1p@chr14:24251717..24251731, +
4.9e-53FFCP PHASE1:Mm9::chr10:67598037..67598049,-#_f0b5d0bb28fd4cccd49dd094fda065b1p@chr10:67598037..67598049, -
4.9e-53FFCP PHASE1:Mm9::chr8:69221150..69221161,+#_f0b5d0bb28fd4cccd49dd094fda065b1p5@Npy1r
4.9e-53FFCP PHASE2:Mm9::chr14:24251717..24251731,+#_f0b5d0bb28fd4cccd49dd094fda065b1p@chr14:24251717..24251731, +
4.9e-53FFCP PHASE2:Mm9::chr8:69221150..69221161,+#_f0b5d0bb28fd4cccd49dd094fda065b1p5@Npy1r
4.9e-53FFCP PHASE2:Mm9::chr17:29227828..29227839,-#_f0b5d0bb28fd4cccd49dd094fda065b1p@chr17:29227828..29227839, -
4.9e-53FFCP PHASE2:Mm9::chr7:91081998..91082010,-#_f0b5d0bb28fd4cccd49dd094fda065b1p@chr7:91081998..91082010, -
4.9e-53FFCP PHASE2:Mm9::chr13:113253807..113253846,+#_f0b5d0bb28fd4cccd49dd094fda065b1p4@Il6st
4.9e-53FFCP PHASE1:Mm9::chr13:113253807..113253846,+#_f0b5d0bb28fd4cccd49dd094fda065b1p4@Il6st
4.9e-53FFCP PHASE2:Mm9::chr10:67598037..67598049,-#_f0b5d0bb28fd4cccd49dd094fda065b1p@chr10:67598037..67598049, -
4.9e-53FFCP PHASE1:Mm9::chr2:113589030..113589077,-#_f0b5d0bb28fd4cccd49dd094fda065b1p@chr2:113589030..113589077, -
7.35e-53FFCP PHASE2:Mm9::chr4:58219542..58219545,-#_f0ad985df629d938049f7b6cc00356afp11@Svep1
7.35e-53FFCP PHASE1:Mm9::chr4:58219542..58219545,-#_f0ad985df629d938049f7b6cc00356afp11@Svep1
1.1e-52FFCP PHASE2:Mm9::chrX:160838787..160838800,+#_c4989d7dafde0b0eac48c0007faa963ap@chrX:160838787..160838800, +
1.1e-52FFCP PHASE1:Mm9::chrX:160838787..160838800,+#_c4989d7dafde0b0eac48c0007faa963ap@chrX:160838787..160838800, +
1.65e-52FFCP PHASE2:Mm9::chr1:137662814..137662817,+#_42cbb2861528381173248d689b6dc799p5@Phlda3
1.65e-52FFCP PHASE1:Mm9::chr1:137662814..137662817,+#_42cbb2861528381173248d689b6dc799p5@Phlda3
5.51e-52FFCP PHASE2:Mm9::chr2:65009852..65009866,-#_af5d831710e2261ac79f4f45fc96ef4bp@chr2:65009852..65009866, -
5.51e-52FFCP PHASE1:Mm9::chr2:65009852..65009866,-#_af5d831710e2261ac79f4f45fc96ef4bp@chr2:65009852..65009866, -
1.18e-44FFCP PHASE1:Mm9::chrX:160838683..160838694,+#_2ff92e5e5399d41b14c776e7cc9bb4ccp@chrX:160838683..160838694, +
1.18e-44FFCP PHASE2:Mm9::chr11:86417559..86417568,+#_2ff92e5e5399d41b14c776e7cc9bb4ccp@chr11:86417559..86417568, +
1.18e-44FFCP PHASE1:Mm9::chr13:119579287..119579292,+#_2ff92e5e5399d41b14c776e7cc9bb4ccp@chr13:119579287..119579292, +
1.18e-44FFCP PHASE2:Mm9::chr1:127573864..127573879,+#_2ff92e5e5399d41b14c776e7cc9bb4ccp10@Gpr39
1.18e-44FFCP PHASE1:Mm9::chr1:127573864..127573879,+#_2ff92e5e5399d41b14c776e7cc9bb4ccp10@Gpr39
1.18e-44FFCP PHASE1:Mm9::chr11:86417559..86417568,+#_2ff92e5e5399d41b14c776e7cc9bb4ccp@chr11:86417559..86417568, +
1.18e-44FFCP PHASE1:Mm9::chr17:14813242..14813246,-#_2ff92e5e5399d41b14c776e7cc9bb4ccp@chr17:14813242..14813246, -
1.18e-44FFCP PHASE1:Mm9::chr2:178190136..178190151,+#_2ff92e5e5399d41b14c776e7cc9bb4ccp@chr2:178190136..178190151, +
1.18e-44FFCP PHASE2:Mm9::chr17:14813242..14813246,-#_2ff92e5e5399d41b14c776e7cc9bb4ccp@chr17:14813242..14813246, -
1.18e-44FFCP PHASE2:Mm9::chr13:119579287..119579292,+#_2ff92e5e5399d41b14c776e7cc9bb4ccp@chr13:119579287..119579292, +
1.18e-44FFCP PHASE2:Mm9::chrX:160838683..160838694,+#_2ff92e5e5399d41b14c776e7cc9bb4ccp@chrX:160838683..160838694, +
1.18e-44FFCP PHASE2:Mm9::chr2:178190136..178190151,+#_2ff92e5e5399d41b14c776e7cc9bb4ccp@chr2:178190136..178190151, +
1.66e-44FFCP PHASE2:Mm9::chrX:160839663..160839673,+#_8f18220faaccb7904e6c4473c3d73447p@chrX:160839663..160839673, +
1.66e-44FFCP PHASE1:Mm9::chrX:160839663..160839673,+#_8f18220faaccb7904e6c4473c3d73447p@chrX:160839663..160839673, +
1.66e-44FFCP PHASE2:Mm9::chr13:119503185..119503195,+#_8f18220faaccb7904e6c4473c3d73447p9@Fgf10
1.66e-44FFCP PHASE1:Mm9::chr13:119503185..119503195,+#_8f18220faaccb7904e6c4473c3d73447p9@Fgf10
2.33e-44FFCP PHASE2:Mm9::chr17:75790300..75790304,+#_f3e78d4b12ba66b622d1f8a092d97b14p@chr17:75790300..75790304, +
2.33e-44FFCP PHASE1:Mm9::chr17:75790300..75790304,+#_f3e78d4b12ba66b622d1f8a092d97b14p@chr17:75790300..75790304, +
3.27e-44FFCP PHASE2:Mm9::chr1:127573708..127573719,+#_81d8e35d33e701c13cf09966b29b183dp9@Gpr39
3.27e-44FFCP PHASE1:Mm9::chr1:127573708..127573719,+#_81d8e35d33e701c13cf09966b29b183dp9@Gpr39
4.58e-44FFCP PHASE1:Mm9::chr17:14813991..14813999,+#_4e7dca654e73ae4e032821fad10d943bp@chr17:14813991..14813999, +
4.58e-44FFCP PHASE2:Mm9::chr17:14813991..14813999,+#_4e7dca654e73ae4e032821fad10d943bp@chr17:14813991..14813999, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0004178&oldid=1833061"