Personal tools

UBERON:0006553

From FANTOM5_SSTAR

Revision as of 17:07, 26 June 2012 by Autoedit (talk | contribs)
Jump to: navigation, search

Name:renal duct
Definition:"A tube in the kidney that collect and transport urine." [ZFIN:ZDB-PUB-071029-9]
Xrefs:
links:

TAO:0005289

ZFA:0005289
Comments:in ZFA this is defined as part of mesonephros

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000058(duct),UBERON:0006554(urinary system structure)



Children

is a:UBERON:0009201 (nephric duct)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006553 (renal duct), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.58e-86FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_c996e4a6607e53096692777a1b938268p4@Spink12
1.58e-86FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_c996e4a6607e53096692777a1b938268p4@Spink12
3.28e-58FFCP PHASE1:Mm9::chr8:23045782..23045791,+#_9b3409e528ac533dfd8475c41e23287dp@chr8:23045782..23045791, +
3.28e-58FFCP PHASE1:Mm9::chr17:73221016..73221031,+#_9b3409e528ac533dfd8475c41e23287dp@chr17:73221016..73221031, +
3.28e-58FFCP PHASE1:Mm9::chr13:46041606..46041640,-#_9b3409e528ac533dfd8475c41e23287dp@chr13:46041606..46041640, -
3.28e-58FFCP PHASE1:Mm9::chr9:35657485..35657490,-#_9b3409e528ac533dfd8475c41e23287dp3@Gm3428
3.28e-58FFCP PHASE2:Mm9::chr5:124447371..124447383,+#_9b3409e528ac533dfd8475c41e23287dp@chr5:124447371..124447383, +
3.28e-58FFCP PHASE2:Mm9::chrX:20219008..20219045,+#_9b3409e528ac533dfd8475c41e23287dp@chrX:20219008..20219045, +
3.28e-58FFCP PHASE1:Mm9::chr8:113585714..113585722,-#_9b3409e528ac533dfd8475c41e23287dp@chr8:113585714..113585722, -
3.28e-58FFCP PHASE1:Mm9::chr14:51627616..51627623,+#_9b3409e528ac533dfd8475c41e23287dp2@Rnase10
3.28e-58FFCP PHASE1:Mm9::chrX:75798157..75798162,-#_9b3409e528ac533dfd8475c41e23287dp@chrX:75798157..75798162, -
3.28e-58FFCP PHASE1:Mm9::chr3:107731917..107731926,-#_9b3409e528ac533dfd8475c41e23287dp@chr3:107731917..107731926, -
3.28e-58FFCP PHASE1:Mm9::chr17:24865194..24865204,+#_9b3409e528ac533dfd8475c41e23287dp@chr17:24865194..24865204, +
3.28e-58FFCP PHASE2:Mm9::chr8:91107095..91107103,+#_9b3409e528ac533dfd8475c41e23287dp@chr8:91107095..91107103, +
3.28e-58FFCP PHASE1:Mm9::chrX:103276578..103276585,+#_9b3409e528ac533dfd8475c41e23287dp@chrX:103276578..103276585, +
3.28e-58FFCP PHASE2:Mm9::chr19:24582739..24582748,-#_9b3409e528ac533dfd8475c41e23287dp@chr19:24582739..24582748, -
3.28e-58FFCP PHASE1:Mm9::chr9:26704579..26704582,-#_9b3409e528ac533dfd8475c41e23287dp@chr9:26704579..26704582, -
3.28e-58FFCP PHASE1:Mm9::chr6:118298429..118298448,+#_9b3409e528ac533dfd8475c41e23287dp@chr6:118298429..118298448, +
3.28e-58FFCP PHASE2:Mm9::chr8:19142604..19142612,+#_9b3409e528ac533dfd8475c41e23287dp@chr8:19142604..19142612, +
3.28e-58FFCP PHASE1:Mm9::chr1:43367743..43367754,-#_9b3409e528ac533dfd8475c41e23287dp@chr1:43367743..43367754, -
3.28e-58FFCP PHASE1:Mm9::chr13:21380670..21380678,-#_9b3409e528ac533dfd8475c41e23287dp@chr13:21380670..21380678, -
3.28e-58FFCP PHASE1:Mm9::chr9:35585507..35585517,-#_9b3409e528ac533dfd8475c41e23287dp4@Gm17727
3.28e-58FFCP PHASE2:Mm9::chr8:25706074..25706082,-#_9b3409e528ac533dfd8475c41e23287dp3@Ido1
3.28e-58FFCP PHASE2:Mm9::chr13:21378968..21378988,-#_9b3409e528ac533dfd8475c41e23287dp@chr13:21378968..21378988, -
3.28e-58FFCP PHASE1:Mm9::chr16:23308182..23308185,+#_9b3409e528ac533dfd8475c41e23287dp@chr16:23308182..23308185, +
3.28e-58FFCP PHASE1:Mm9::chr10:28772042..28772046,-#_9b3409e528ac533dfd8475c41e23287dp@chr10:28772042..28772046, -
3.28e-58FFCP PHASE2:Mm9::chr1:87922962..87922982,+#_9b3409e528ac533dfd8475c41e23287dp@chr1:87922962..87922982, +
3.28e-58FFCP PHASE2:Mm9::chr4:134913640..134913649,+#_9b3409e528ac533dfd8475c41e23287dp@chr4:134913640..134913649, +
3.28e-58FFCP PHASE2:Mm9::chr17:73221016..73221031,+#_9b3409e528ac533dfd8475c41e23287dp@chr17:73221016..73221031, +
3.28e-58FFCP PHASE2:Mm9::chr5:31379878..31379883,+#_9b3409e528ac533dfd8475c41e23287dp@chr5:31379878..31379883, +
3.28e-58FFCP PHASE1:Mm9::chr5:77645280..77645295,-#_9b3409e528ac533dfd8475c41e23287dp@chr5:77645280..77645295, -
3.28e-58FFCP PHASE2:Mm9::chr1:165219453..165219469,-#_9b3409e528ac533dfd8475c41e23287dp11@Prrx1
3.28e-58FFCP PHASE1:Mm9::chr14:52542661..52542668,-#_9b3409e528ac533dfd8475c41e23287dp3@Rnase13
3.28e-58FFCP PHASE1:Mm9::chr13:21379261..21379264,-#_9b3409e528ac533dfd8475c41e23287dp@chr13:21379261..21379264, -
3.28e-58FFCP PHASE2:Mm9::chr1:90155707..90155720,+#_9b3409e528ac533dfd8475c41e23287dp@chr1:90155707..90155720, +
3.28e-58FFCP PHASE2:Mm9::chr10:52101299..52101305,+#_9b3409e528ac533dfd8475c41e23287dp@chr10:52101299..52101305, +
3.28e-58FFCP PHASE2:Mm9::chr8:23057222..23057234,+#_9b3409e528ac533dfd8475c41e23287dp1@Defb13
3.28e-58FFCP PHASE1:Mm9::chr2:160573108..160573123,+#_9b3409e528ac533dfd8475c41e23287dp@chr2:160573108..160573123, +
3.28e-58FFCP PHASE2:Mm9::chr13:21378774..21378782,-#_9b3409e528ac533dfd8475c41e23287dp@chr13:21378774..21378782, -
3.28e-58FFCP PHASE2:Mm9::chr11:101959194..101959224,-#_9b3409e528ac533dfd8475c41e23287dp@chr11:101959194..101959224, -
3.28e-58FFCP PHASE1:Mm9::chr1:89597834..89597840,+#_9b3409e528ac533dfd8475c41e23287dp@chr1:89597834..89597840, +
3.28e-58FFCP PHASE2:Mm9::chr2:152302768..152302774,+#_9b3409e528ac533dfd8475c41e23287dp4@Defb20
3.28e-58FFCP PHASE1:Mm9::chr2:74440187..74440209,-#_9b3409e528ac533dfd8475c41e23287dp@chr2:74440187..74440209, -
3.28e-58FFCP PHASE2:Mm9::chr6:54359310..54359337,-#_9b3409e528ac533dfd8475c41e23287dp@chr6:54359310..54359337, -
3.28e-58FFCP PHASE1:Mm9::chr5:31379550..31379559,+#_9b3409e528ac533dfd8475c41e23287dp@chr5:31379550..31379559, +
3.28e-58FFCP PHASE2:Mm9::chr13:21383212..21383225,-#_9b3409e528ac533dfd8475c41e23287dp@chr13:21383212..21383225, -
3.28e-58FFCP PHASE2:Mm9::chr14:66521865..66521876,+#_9b3409e528ac533dfd8475c41e23287dp@chr14:66521865..66521876, +
3.28e-58FFCP PHASE2:Mm9::chr5:75559819..75559830,+#_9b3409e528ac533dfd8475c41e23287dp@chr5:75559819..75559830, +
3.28e-58FFCP PHASE1:Mm9::chr9:65941913..65941923,-#_9b3409e528ac533dfd8475c41e23287dp@chr9:65941913..65941923, -
3.28e-58FFCP PHASE1:Mm9::chr2:152302813..152302821,+#_9b3409e528ac533dfd8475c41e23287dp3@Defb20
3.28e-58FFCP PHASE2:Mm9::chr2:75866210..75866235,+#_9b3409e528ac533dfd8475c41e23287dp@chr2:75866210..75866235, +
3.28e-58FFCP PHASE2:Mm9::chr2:164479340..164479350,+#_9b3409e528ac533dfd8475c41e23287dp@chr2:164479340..164479350, +
3.28e-58FFCP PHASE1:Mm9::chr13:21379065..21379072,-#_9b3409e528ac533dfd8475c41e23287dp@chr13:21379065..21379072, -
3.28e-58FFCP PHASE2:Mm9::chr17:24670830..24670845,+#_9b3409e528ac533dfd8475c41e23287dp@chr17:24670830..24670845, +
3.28e-58FFCP PHASE1:Mm9::chr8:19141371..19141383,+#_9b3409e528ac533dfd8475c41e23287dp@chr8:19141371..19141383, +
3.28e-58FFCP PHASE2:Mm9::chr1:89596972..89596981,+#_9b3409e528ac533dfd8475c41e23287dp@chr1:89596972..89596981, +
3.28e-58FFCP PHASE2:Mm9::chr12:16663110..16663116,+#_9b3409e528ac533dfd8475c41e23287dp3@Ntsr2
3.28e-58FFCP PHASE1:Mm9::chr17:35249011..35249020,-#_9b3409e528ac533dfd8475c41e23287dp@chr17:35249011..35249020, -
3.28e-58FFCP PHASE1:Mm9::chr12:103896072..103896081,-#_9b3409e528ac533dfd8475c41e23287dp@chr12:103896072..103896081, -
3.28e-58FFCP PHASE2:Mm9::chr8:96014490..96014496,+#_9b3409e528ac533dfd8475c41e23287dp@chr8:96014490..96014496, +
3.28e-58FFCP PHASE1:Mm9::chrX:130496372..130496393,-#_9b3409e528ac533dfd8475c41e23287dp@chrX:130496372..130496393, -
3.28e-58FFCP PHASE2:Mm9::chr4:40010825..40010844,-#_9b3409e528ac533dfd8475c41e23287dp@chr4:40010825..40010844, -
3.28e-58FFCP PHASE2:Mm9::chr10:56515486..56515496,+#_9b3409e528ac533dfd8475c41e23287dp@chr10:56515486..56515496, +
3.28e-58FFCP PHASE2:Mm9::chr8:113585714..113585722,-#_9b3409e528ac533dfd8475c41e23287dp@chr8:113585714..113585722, -
3.28e-58FFCP PHASE1:Mm9::chr5:31377177..31377184,+#_9b3409e528ac533dfd8475c41e23287dp@chr5:31377177..31377184, +
3.28e-58FFCP PHASE2:Mm9::chr13:21379306..21379315,-#_9b3409e528ac533dfd8475c41e23287dp@chr13:21379306..21379315, -
3.28e-58FFCP PHASE2:Mm9::chr9:35651788..35651804,-#_9b3409e528ac533dfd8475c41e23287dp1@9230110F15Rik
3.28e-58FFCP PHASE2:Mm9::chr2:172632171..172632178,-#_9b3409e528ac533dfd8475c41e23287dp@chr2:172632171..172632178, -
3.28e-58FFCP PHASE2:Mm9::chr2:167480413..167480463,-#_9b3409e528ac533dfd8475c41e23287dp@chr2:167480413..167480463, -
3.28e-58FFCP PHASE1:Mm9::chr9:56469136..56469145,-#_9b3409e528ac533dfd8475c41e23287dp@chr9:56469136..56469145, -
3.28e-58FFCP PHASE2:Mm9::chrX:20422498..20422506,+#_9b3409e528ac533dfd8475c41e23287dp@chrX:20422498..20422506, +
3.28e-58FFCP PHASE1:Mm9::chr4:150092027..150092070,-#_9b3409e528ac533dfd8475c41e23287dp@chr4:150092027..150092070, -
3.28e-58FFCP PHASE1:Mm9::chr3:103650730..103650741,+#_9b3409e528ac533dfd8475c41e23287dp@chr3:103650730..103650741, +
3.28e-58FFCP PHASE1:Mm9::chr1:165219453..165219469,-#_9b3409e528ac533dfd8475c41e23287dp11@Prrx1
3.28e-58FFCP PHASE1:Mm9::chr18:62775330..62775347,-#_9b3409e528ac533dfd8475c41e23287dp@chr18:62775330..62775347, -
3.28e-58FFCP PHASE2:Mm9::chr2:25349414..25349424,-#_9b3409e528ac533dfd8475c41e23287dp5@Lcn12
3.28e-58FFCP PHASE2:Mm9::chr2:164439019..164439029,+#_9b3409e528ac533dfd8475c41e23287dp1@Wfdc6b
3.28e-58FFCP PHASE1:Mm9::chr2:148676859..148676866,-#_9b3409e528ac533dfd8475c41e23287dp5@9230104L09Rik
3.28e-58FFCP PHASE2:Mm9::chr17:14306714..14306740,+#_9b3409e528ac533dfd8475c41e23287dp@chr17:14306714..14306740, +
3.28e-58FFCP PHASE2:Mm9::chr2:148676859..148676866,-#_9b3409e528ac533dfd8475c41e23287dp5@9230104L09Rik
3.28e-58FFCP PHASE1:Mm9::chrX:12571679..12571688,-#_9b3409e528ac533dfd8475c41e23287dp@chrX:12571679..12571688, -
3.28e-58FFCP PHASE1:Mm9::chr9:26730625..26730636,-#_9b3409e528ac533dfd8475c41e23287dp3@Gm1110
3.28e-58FFCP PHASE2:Mm9::chr3:103650758..103650778,+#_9b3409e528ac533dfd8475c41e23287dp@chr3:103650758..103650778, +
3.28e-58FFCP PHASE1:Mm9::chr1:87922962..87922982,+#_9b3409e528ac533dfd8475c41e23287dp@chr1:87922962..87922982, +
3.28e-58FFCP PHASE2:Mm9::chr10:127470322..127470326,+#_9b3409e528ac533dfd8475c41e23287dp@chr10:127470322..127470326, +
3.28e-58FFCP PHASE2:Mm9::chr14:51627616..51627623,+#_9b3409e528ac533dfd8475c41e23287dp2@Rnase10
3.28e-58FFCP PHASE1:Mm9::chr9:35651679..35651691,-#_9b3409e528ac533dfd8475c41e23287dp5@9230110F15Rik
3.28e-58FFCP PHASE2:Mm9::chrX:103276578..103276585,+#_9b3409e528ac533dfd8475c41e23287dp@chrX:103276578..103276585, +
3.28e-58FFCP PHASE2:Mm9::chr13:21379118..21379120,-#_9b3409e528ac533dfd8475c41e23287dp@chr13:21379118..21379120, -
3.28e-58FFCP PHASE2:Mm9::chr9:35585507..35585517,-#_9b3409e528ac533dfd8475c41e23287dp4@Gm17727
3.28e-58FFCP PHASE1:Mm9::chr11:116901629..116901639,-#_9b3409e528ac533dfd8475c41e23287dp3@uc007mmw.1
3.28e-58FFCP PHASE2:Mm9::chr11:59845376..59845393,-#_9b3409e528ac533dfd8475c41e23287dp@chr11:59845376..59845393, -
3.28e-58FFCP PHASE2:Mm9::chr18:74784728..74784738,+#_9b3409e528ac533dfd8475c41e23287dp@chr18:74784728..74784738, +
3.28e-58FFCP PHASE2:Mm9::chr9:26688157..26688159,-#_9b3409e528ac533dfd8475c41e23287dp@chr9:26688157..26688159, -
3.28e-58FFCP PHASE2:Mm9::chr14:52542661..52542668,-#_9b3409e528ac533dfd8475c41e23287dp3@Rnase13
3.28e-58FFCP PHASE2:Mm9::chr14:103746280..103746298,+#_9b3409e528ac533dfd8475c41e23287dp@chr14:103746280..103746298, +
3.28e-58FFCP PHASE2:Mm9::chrX:130496372..130496393,-#_9b3409e528ac533dfd8475c41e23287dp@chrX:130496372..130496393, -
3.28e-58FFCP PHASE1:Mm9::chr2:172632171..172632178,-#_9b3409e528ac533dfd8475c41e23287dp@chr2:172632171..172632178, -
3.28e-58FFCP PHASE2:Mm9::chr13:23683348..23683398,+#_9b3409e528ac533dfd8475c41e23287dp@chr13:23683348..23683398, +
3.28e-58FFCP PHASE2:Mm9::chr8:19141429..19141440,+#_9b3409e528ac533dfd8475c41e23287dp@chr8:19141429..19141440, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0006553&oldid=1836219"