Personal tools

UBERON:0000088

From FANTOM5_SSTAR

Revision as of 13:25, 27 June 2012 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Name:trophoblast
Definition:"Aggregate of cells forming the outer layer of a blastocyst, which provide nutrients to the embryo and develop into a large part of the placenta. They are formed during the first stage of pregnancy and are the first cells to differentiate from the fertilized egg." [Wikipedia:Trophoblast]
Xrefs:
links:

BTO:0001079
EV:0100120
FMA:83029
GAID:1152
[1]
[ 200px-Blastocyst_English.svg.png 200px-Blastocyst_English.svg.png]
MESH:A.11.936
ncithesaurus:Trophoblast

SCTID:362839005
Synonyms: "trophoblast layer" RELATED [MP:0005031]
"trophoblastus; massa cellularis externa" RELATED LATIN [Wikipedia:Trophoblast]
"trophoderm" RELATED [BTO:0001079]
Comments:Development notes: The postimplantation derivatives of the trophectoderm, which make up most of the fetal part of the placenta[PMID:19829370]
Subset: early_development

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0002050(embryonic structure)
part_of:UBERON:0000358(blastocyst)



Children

part of:FF:0000190 (trophoblast)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000088 (trophoblast), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results