Personal tools

MacroAPE 1083:CNhs11245 bl f2

From FANTOM5_SSTAR

Revision as of 12:21, 7 September 2012 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Full Name: CNhs11245_bl_f2

Motif matrix
POACGT
1149.84006736751672473.87422973670374247.66471158973553306.1000626594714
2252.46180252335438163.71237620273456266.2948973732554495.0099952540834
3178.5618357016738358.142174606214795708.2290500059397232.5460110396
4204.32399371615674299.16535587607285618.385984049151355.60373771204776
533.7535083359632751133.65453512525663.0043780019335747.06664989027551
60.03.94717319500355670.01173.5318981584248
70.01162.17630648494511.1059414871578034.196823381326099
8189.786405339223995.288684299417184.283230169262407888.1207515455235
932.274238960352804377.9997904985891602.5650216443748164.64002025011092
10203.10492686863088384.4574415744566572.81114797611451517.1055549342257
11133.87266927917221524.1931839462802220.5195191953763298.8936989325991

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

Trl#MA0205.1-14.70954e-050.02241740.044834810CTGGCTCTGTCTTGCTCTCTC+
ECM23#MA0293.110.003475991.65457110CTGGCTCTGTCTTTAGATCTTT-
GAT4#MA0302.110.003475991.65457110CTGGCTCTGTCTTTAGATCTTT-
CRZ1#MA0285.100.005229442.4892119CTGGCTCTGTCGTGGCTTAG-
ARG81#MA0272.100.007825643.7250118CTGGCTCTGTCGTGACTCT+
BAS1#MA0278.150.008592544.09005111CTGGCTCTGTCTTGACTTGACTCTGGCTGTGC-
HAP5#MA0316.100.01494577.11416111CTGGCTCTGTCTGGGATCTGATTGGT+
REST#MA0138.2-20.01569797.4721919CTGGCTCTGTCGGCGCTGTCCATGGTGCTGAA-
Dof2#MA0020.1-20.02021199.6208616CTGGCTCTGTCTGCTTT-