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MacroAPE 1083:AR LNCAP-AR-ChIP-Seq/Homer

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Full Name: AR_LNCAP-AR-ChIP-Seq/Homer

Motif matrix
POACGT
1357583262794
241387050168
32980153521081016
46798199298344
587547768
663568328947
7733222331631520
82002178018562002
9155131242231733
1094035186340
1188475398
123593211386821
13970204715133109
148472118336
15779314083712
161100199418332712

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

Ar#MA0007.131.0814e-095.14745e-075.08093e-0716AGAACAGTCTGTTCTTATAAGAACACCCTGTACCCGCC+
NR3C1#MA0113.122.32895e-081.10858e-057.29503e-0616AGAACAGTCTGTTCTTTCAGGACATAATGTTCCC-
ESR2#MA0258.123.39298e-050.01615060.0061115216AGAACAGTCTGTTCTTCAAGGTCACGGTGACCTG+
ESR1#MA0112.200.0002849450.1356340.038251816AGAACAGTCTGTTCTTAGGTCAGGGTGACCTGGGCC-
GAL4#MA0299.110.001565760.74530.15495514AGAACAGTCTGTTCTTCGGGGAACAGTACTC+
lin-14#MA0261.1-80.001648990.7849180.1549556AGAACAGTCTGTTCTTGTGTTC-
MGA1#MA0336.1-20.00314711.498020.23250514AGAACAGTCTGTTCTTTTTAGAGTGTTCTATAGTCCT-
ESR1#MA0112.210.003614251.720380.24259316AGAACAGTCTGTTCTTGGGGTCACGGTGACCTGG-
PPARG#MA0066.120.004666212.221110.26006516AGAACAGTCTGTTCTTGTAGGTCACGGTGACCTACT+
RXRA::VDR#MA0074.100.01381296.574930.68315415AGAACAGTCTGTTCTTGGGTCAACGAGTTCA+