Personal tools

MacroAPE 1083:MEF2(A,B,C,D)

From FANTOM5_SSTAR

Revision as of 12:26, 7 September 2012 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Full Name: MEF2{A,B,C,D

Motif matrix
null

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

MEF2A#MA0052.101.3017e-106.1961e-081.22077e-0710CTATTTATAGCTATTTATAG+
RLM1#MA0369.141.27823e-050.006084390.0059937910CTATTTATAGGAATCTATTTATAGAACT-
AGL3#MA0001.102.76233e-050.01314870.0086352810CTATTTATAGCTATTTATGG-
squamosa#MA0082.140.0003298430.1570050.061866910CTATTTATAGATTTCCATTTTTGG-
TBP#MA0108.250.0008709240.414560.11539710CTATTTATAGCCCCGCCTTTTATAC-
TBP#MA0108.250.0008709240.414560.11539710CTATTTATAGCCCCGCCTTTTATAC-
FOXL1#MA0033.1-10.001752030.8339660.164318CTATTTATAGTATGTATA-
br_Z2#MA0011.120.00271481.292240.2314556CTATTTATAGTACTATTT+
NHP6A#MA0345.160.004282372.038410.33467610CTATTTATAGTCATTTTTATATATAGGTCAT-
Cf2_II#MA0015.100.007221633.43750.52019310CTATTTATAGGTATATATAC+
SMP1#MA0383.170.009089634.326660.52019310CTATTTATAGTGCTAATTTAATTATAGGTAA-
RORA_2#MA0072.150.009207034.382550.5201939CTATTTATAGTTGACCTACTTATA-
SUM1#MA0398.110.01182015.626380.6158448CTATTTATAGAAAATTTTT+
HCM1#MA0317.100.01306256.217770.6297998CTATTTATAGTTGTTTAT-
HMG-I/Y#MA0045.160.01409656.709950.62979910CTATTTATAGGTTTTTCCATTTGTTG-
Vsx2#MA0180.100.01418296.751080.6297999CTATTTATAGCTAATTAAA-
NHP6B#MA0346.150.01544577.352170.62979910CTATTTATAGTTTATTTATATATAATATGA+
Pdx1#MA0132.100.01764578.399350.6842226CTATTTATAGCTAATT+
ro#MA0241.100.01919669.137590.6842227CTATTTATAGCTAATTA+
PHDP#MA0457.100.01919669.137590.6842227CTATTTATAGTTAATTA+