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MacroAPE 1083:9-GGGGTTT

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Full Name: 9-GGGGTTT,CNhs11958,BestGuess:REL_do_HM09(0.715499181166044),T:3541.0(67.28%),B:24463.4(56.33%),P:1e-58

Motif matrix
POACGT
13.5411179.1532354.7653.541
23.541888.7912620.3428.328
33.5413.5413509.13124.787
43.5413.5412064.4031469.515
5775.4793.5413.5412758.439
63.5413.5413.5413530.377
73.5413.5413.5413530.377

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

dl_1#MA0022.106.5839e-060.003133940.006267877GGGGTTTGGGGTTTTTCCC+
dl_2#MA0023.107.23075e-050.03441840.03441847GGGGTTTGGGGATTTCC+
REL#MA0101.110.00101250.4819490.3212997GGGGTTTGGGGATTTCC+
NDT80#MA0343.120.002904561.382570.6912847GGGGTTTTTGCGTTTTTGTGGCCGGAAA-
run::Bgb#MA0242.120.007139023.3981717GGGGTTTTTGCGGTTA-
AFT2#MA0270.100.00841944.0076417GGGGTTTGGGGTGTG-
RELA#MA0107.110.008563774.0763617GGGGTTTGGGAATTTCC+
NFKB1#MA0105.100.01040294.9517817GGGGTTTGGGGATTCCCC+
che-1#MA0260.1-20.0106855.0860515GGGGTTTGGTTTC-
NF-kappaB#MA0061.100.01150615.4768917GGGGTTTGGGAATTTCC+
TBP#MA0108.230.01398936.6589317GGGGTTTCCCCGCCTTTTATAC-
TBP#MA0108.230.01398936.6589317GGGGTTTCCCCGCCTTTTATAC-
RUNX1#MA0002.240.01654287.8743917GGGGTTTGTCTGTGGTTT+
Ddit3::Cebpa#MA0019.1-10.02054059.7772616GGGGTTTGGGATTGCATCT-