Personal tools

MacroAPE 1083:MTF1 f1

From FANTOM5_SSTAR

Revision as of 14:16, 7 September 2012 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Full Name: MTF1_f1

Motif matrix
POACGT
115.42154811715483512.0533472803347533.8734309623430973.6809623430962524
24.7154811715481342.30962343096234428.0041841004184560.0
33.2719665271966550.962343096234311513.2803347280334817.51464435146445
47.5062761506276115.96652719665271420.8828451882845340.6736401673640163
57.60251046025105218.9581589958159071.53974895397489836.9288702928870425
62.983263598326363629.6401673640167580.86610878661087851.5397489539748983
70.00.035.02928870292890.0
83.3682008368200880.86610878661087854.52301255230125526.271966527196675
90.00.962343096234311534.066945606694610.0
100.011.4518828451882970.023.577405857740604
110.00.035.02928870292890.0
120.034.163179916318050.00.8661087866108785
1335.02928870292890.00.00.0
1418.6694560669456244.330543933054416.2552301255230335.774058577405869
1522.1338912133891459.5271966527196761.82845188284519011.5397489539748983
1614.3389121338912153.65690376569036610.2970711297071246.736401673640163
174.18619246861926815.2531380753138410.922594142259434.667364016736397

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

AFT1#MA0269.100.0001750140.08330670.16661317AGTGCCGTGTGCAAAACCCAATCGGGTGCAATATGTAA-
STP2#MA0395.150.00665353.16707115AGTGCCGTGTGCAAAACTGATCGGCGCCGCACGACGA+
MAC1#MA0326.1-70.008826674.2014918AGTGCCGTGTGCAAAACTGAGCAAA-
Myc#MA0147.1-30.01108635.27708110AGTGCCGTGTGCAAAACGCCACGTGCG-
Mycn#MA0104.2-30.01319976.28307110AGTGCCGTGTGCAAAACGCCACGTGCG-
slbo#MA0244.1-70.01435986.8352718AGTGCCGTGTGCAAAACTTTGCAAT-
NRG1#MA0347.120.01836938.74378117AGTGCCGTGTGCAAAACCTAGATCAGGGTCCATCGCA+
RTG3#MA0376.140.01978959.4198116AGTGCCGTGTGCAAAACGACTAAGCACGTGCTAATAT-