Personal tools

MacroAPE 1083:CNhs13498 bu f1

From FANTOM5_SSTAR

Revision as of 14:25, 7 September 2012 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Full Name: CNhs13498_bu_f1

Motif matrix
POACGT
157.41509319083663786.911560787573137.31678262761805143.07928466498794
2158.6703628347717229.5490931252814477.8080313574972558.6952339534656
32.8857383003666888529.4157951406321354.7041292890168137.71705854099994
46.105350801970209292.4431525636956618.084149860563137708.090068044786
52.9005595943943963387.5049672791238323.151426809007386611.1657675884898
64.362486491848501841.989603920809618.670251804075903159.70037905428106
713.141858223338951009.16967823749280.02.411184810183641
813.821286289101524.7718577561786333.5430309953940841002.586546230341
911.016707016770258123.31807790813365661.2593039834513229.1286323626607
10108.430553452936445.0517570040086295.2404187599763175.9999920540945
11158.7928486587999395.71054299948662371.2005736287296399.0187559839991
1263.99907476929991406.5258176882484342.15850874280613212.03932007066103

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

GABPA#MA0062.200.0006863950.3267240.5605510CTCTTCCTGCTCCTCTTCCGGT-
Eip74EF#MA0026.1-20.001967220.9363980.560557CTCTTCCTGCTCCTTCCGG-
ELK1#MA0028.1-20.002230361.061650.5605510CTCTTCCTGCTCCTTCCGGCTC-
ELF5#MA0136.100.002358341.122570.560559CTCTTCCTGCTCTACTTCCTT+
FEV#MA0156.1-10.003283591.562990.6243778CTCTTCCTGCTCATTTCCTG-
SPI1#MA0080.2-10.004034791.920560.6393497CTCTTCCTGCTCACTTCCT-
REST#MA0138.230.005420792.58030.73626312CTCTTCCTGCTCGCGCTGTCCATGGTGCTGA+
SPI1#MA0080.2-20.007234643.443690.8398646CTCTTCCTGCTCCTTCCG-
Klf4#MA0039.100.00795033.784340.83986410CTCTTCCTGCTCCCTTCCTTTA-
GABPA#MA0062.220.01015034.831550.9650459CTCTTCCTGCTCGCCACTTCCGG-
RXR::RAR_DR5#MA0159.140.01137745.415630.98337212CTCTTCCTGCTCTGACCTCTCCGTGACCT-
IXR1#MA0323.130.01255285.975140.98559312CTCTTCCTGCTCCCCCGCTTCCGGCTT-
MZF1_5-13#MA0057.100.0139116.621640.98559310CTCTTCCTGCTCTTCCCCCTAC-
ETS1#MA0098.1-20.01461646.95740.9855936CTCTTCCTGCTCCTTCCG+
SPIB#MA0081.1-30.0168228.007270.9855937CTCTTCCTGCTCTTCCTCT-
REST#MA0138.240.01728148.225930.98559312CTCTTCCTGCTCGGCGCTGTCCATGGTGCTGAA-
id1#MA0120.1-10.01762298.388520.98559311CTCTTCCTGCTCTTTTCCTTTTCG+