Personal tools

MacroAPE 1083:CNhs12623 bu f2

From FANTOM5_SSTAR

Revision as of 14:58, 7 September 2012 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Full Name: CNhs12623_bu_f2

Motif matrix
POACGT
1139.2707189432615336.57667954523229562.6520420045620621.692643927228385
2128.789467867185362.16523837444784635.1715485730962434.06582960555489
39.473479950371267218.3625896727270721.0028368157456511.35317798144032
445.1595730749069115.008683128001425.40190454576994794.621923671606
50.00.20035867564772481.1591000299446268258.83262571469186
62.74350334630060382.431713935294823252.585153203393962.431713935294823
79.61325651054658427.812125006469653200.4667887834426722.29991411982527
840.27264048671917668.5388603666770340.288482416875986111.09210115001211

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

ESR1#MA0112.2100.009939844.7313718AACCTGGTAGGTCAGGGTGACCTGGGCC-
HAP2#MA0313.1-30.0123175.8629215AACCTGGTTTGGT+
RIM101#MA0368.1-20.01634727.7812516AACCTGGTCTTGGCG-
ESR1#MA0112.2110.01727488.2228317AACCTGGTGGGGTCACGGTGACCTGG-