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MCL coexpression mm9:48

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Revision as of 16:09, 10 October 2012 by Autoedit (talk | contribs) (Created page with "{{MCL_coexpression_mm9|gostat_on_MCL_coexpression=GO:0042613;MHC class II protein complex;1.55191553180717e-07;15000,14961,14960,15002!GO:0002504;antigen processing and presen...")
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Phase1 CAGE Peaks

 Short description
Mm9::chr10:39133332..39133342,+p@chr10:39133332..39133342
+
Mm9::chr10:59681684..59681695,+p@chr10:59681684..59681695
+
Mm9::chr10:9452353..9452356,+p@chr10:9452353..9452356
+
Mm9::chr11:102294200..102294224,+p17@Grn
Mm9::chr11:103274384..103274407,-p3@Plekhm1
Mm9::chr11:104443407..104443421,+p11@Myl4
Mm9::chr11:104444189..104444213,+p@chr11:104444189..104444213
+
Mm9::chr11:104498663..104498679,+p4@Itgb3
Mm9::chr11:106167344..106167354,+p@chr11:106167344..106167354
+
Mm9::chr11:11592006..11592012,+p@chr11:11592006..11592012
+
Mm9::chr11:118080347..118080361,-p13@Cyth1
Mm9::chr11:44431567..44431571,-p@chr11:44431567..44431571
-
Mm9::chr11:44432080..44432093,+p@chr11:44432080..44432093
+
Mm9::chr11:44763902..44763910,-p@chr11:44763902..44763910
-
Mm9::chr11:45486700..45486702,+p@chr11:45486700..45486702
+
Mm9::chr11:48652030..48652044,-p@chr11:48652030..48652044
-
Mm9::chr11:48652047..48652061,-p@chr11:48652047..48652061
-
Mm9::chr11:57916364..57916376,+p@chr11:57916364..57916376
+
Mm9::chr11:57916408..57916419,+p@chr11:57916408..57916419
+
Mm9::chr11:83550809..83550821,-p@chr11:83550809..83550821
-
Mm9::chr11:98319611..98319621,+p@chr11:98319611..98319621
+
Mm9::chr11:99029840..99029849,+p@chr11:99029840..99029849
+
Mm9::chr12:103213576..103213581,+p@chr12:103213576..103213581
+
Mm9::chr12:114100377..114100384,+p@chr12:114100377..114100384
+
Mm9::chr12:114659852..114659872,+p@chr12:114659852..114659872
+
Mm9::chr12:36397620..36397624,+p@chr12:36397620..36397624
+
Mm9::chr12:80743813..80743844,-p@chr12:80743813..80743844
-
Mm9::chr12:80744010..80744014,+p@chr12:80744010..80744014
+
Mm9::chr12:81216190..81216212,-p@chr12:81216190..81216212
-
Mm9::chr12:81217906..81217928,-p@chr12:81217906..81217928
-
Mm9::chr12:83345629..83345660,+p@chr12:83345629..83345660
+
Mm9::chr12:87314627..87314636,-p@chr12:87314627..87314636
-
Mm9::chr13:103482045..103482051,+p@chr13:103482045..103482051
+
Mm9::chr13:103483455..103483461,-p@chr13:103483455..103483461
-
Mm9::chr13:112658212..112658227,+p3@ENSMUST00000128198
p3@uc007rwb.1
Mm9::chr13:112773234..112773267,+p@chr13:112773234..112773267
+
Mm9::chr13:112790239..112790251,+p@chr13:112790239..112790251
+
Mm9::chr13:112791395..112791403,-p@chr13:112791395..112791403
-
Mm9::chr13:24814455..24814457,+p@chr13:24814455..24814457
+
Mm9::chr13:30853531..30853540,+p@chr13:30853531..30853540
+
Mm9::chr13:30856430..30856442,+p@chr13:30856430..30856442
+
Mm9::chr13:3536910..3536913,-p@chr13:3536910..3536913
-
Mm9::chr13:43860616..43860632,-p@chr13:43860616..43860632
-
Mm9::chr13:43860874..43860899,+p@chr13:43860874..43860899
+
Mm9::chr13:43860904..43860917,+p@chr13:43860904..43860917
+
Mm9::chr13:43880537..43880572,+p1@Cd83
Mm9::chr13:52678028..52678046,+p8@Syk
Mm9::chr13:52678090..52678104,+p13@Syk
Mm9::chr13:52678161..52678173,+p22@Syk
Mm9::chr13:52678181..52678188,+p27@Syk
Mm9::chr13:83664747..83664756,+p@chr13:83664747..83664756
+
Mm9::chr13:83714156..83714178,-p@chr13:83714156..83714178
-
Mm9::chr13:83714297..83714301,+p@chr13:83714297..83714301
+
Mm9::chr14:63996708..63996735,-p@chr14:63996708..63996735
-
Mm9::chr14:64035812..64035819,+p@chr14:64035812..64035819
+
Mm9::chr14:64037284..64037311,-p@chr14:64037284..64037311
-
Mm9::chr14:64037657..64037672,-p@chr14:64037657..64037672
-
Mm9::chr14:64038376..64038404,-p@chr14:64038376..64038404
-
Mm9::chr14:64056905..64056919,-p@chr14:64056905..64056919
-
Mm9::chr14:66851190..66851197,-p@chr14:66851190..66851197
-
Mm9::chr14:70468933..70468936,-p@chr14:70468933..70468936
-
Mm9::chr14:73733914..73733928,+p@chr14:73733914..73733928
+
Mm9::chr14:8946910..8946950,-p@chr14:8946910..8946950
-
Mm9::chr15:27700724..27700733,+p@chr15:27700724..27700733
+
Mm9::chr15:27700740..27700751,+p@chr15:27700740..27700751
+
Mm9::chr15:27702002..27702019,-p@chr15:27702002..27702019
-
Mm9::chr15:27756368..27756373,+p@chr15:27756368..27756373
+
Mm9::chr15:62009817..62009841,+p@chr15:62009817..62009841
+
Mm9::chr15:62013300..62013316,+p@chr15:62013300..62013316
+
Mm9::chr15:72986001..72986008,+p@chr15:72986001..72986008
+
Mm9::chr15:72986015..72986020,+p@chr15:72986015..72986020
+
Mm9::chr15:72986026..72986036,+p@chr15:72986026..72986036
+
Mm9::chr15:72986987..72987034,-p@chr15:72986987..72987034
-
Mm9::chr15:72987634..72987657,-p@chr15:72987634..72987657
-
Mm9::chr15:72992657..72992663,-p@chr15:72992657..72992663
-
Mm9::chr15:74756547..74756551,+p@chr15:74756547..74756551
+
Mm9::chr15:86013334..86013346,+p@chr15:86013334..86013346
+
Mm9::chr15:96291868..96291885,+p@chr15:96291868..96291885
+
Mm9::chr15:96304878..96304899,-p@chr15:96304878..96304899
-
Mm9::chr16:11077959..11077984,+p@chr16:11077959..11077984
+
Mm9::chr16:13818948..13818976,+p2@Ntan1
Mm9::chr16:19179599..19179640,+p@chr16:19179599..19179640
+
Mm9::chr16:19762056..19762062,+p@chr16:19762056..19762062
+
Mm9::chr16:36712121..36712130,+p@chr16:36712121..36712130
+
Mm9::chr16:36717810..36717842,+p@chr16:36717810..36717842
+
Mm9::chr17:31211635..31211656,-p@chr17:31211635..31211656
-
Mm9::chr17:33032387..33032399,-p@chr17:33032387..33032399
-
Mm9::chr17:34282170..34282175,+p8@H2-DMb2
Mm9::chr17:34376649..34376663,-p@chr17:34376649..34376663
-
Mm9::chr17:34376665..34376680,-p@chr17:34376665..34376680
-
Mm9::chr17:34376816..34376826,+p4@H2-Ob
Mm9::chr17:34376960..34377002,+p3@H2-Ob
Mm9::chr17:34394822..34394833,+p@chr17:34394822..34394833
+
Mm9::chr17:34394879..34394910,+p@chr17:34394879..34394910
+
Mm9::chr17:34398558..34398572,-p@chr17:34398558..34398572
-
Mm9::chr17:34398575..34398589,-p@chr17:34398575..34398589
-
Mm9::chr17:34398746..34398774,+p@chr17:34398746..34398774
+
Mm9::chr17:34398792..34398796,+p@chr17:34398792..34398796
+
Mm9::chr17:34398798..34398803,+p@chr17:34398798..34398803
+
Mm9::chr17:34399992..34400001,-p@chr17:34399992..34400001
-
Mm9::chr17:34400036..34400056,-p@chr17:34400036..34400056
-
Mm9::chr17:34401187..34401229,+p14@H2-Ab1
Mm9::chr17:34401342..34401355,+p16@H2-Ab1
Mm9::chr17:34401774..34401817,-p@chr17:34401774..34401817
-
Mm9::chr17:34401939..34401960,-p@chr17:34401939..34401960
-
Mm9::chr17:34404272..34404290,+p5@H2-Ab1
Mm9::chr17:34404447..34404457,+p7@H2-Ab1
Mm9::chr17:34404492..34404513,+p2@H2-Ab1
Mm9::chr17:34404864..34404875,+p8@H2-Ab1
Mm9::chr17:34404912..34404919,+p13@H2-Ab1
Mm9::chr17:34406169..34406208,-p@chr17:34406169..34406208
-
Mm9::chr17:34406267..34406282,-p@chr17:34406267..34406282
-
Mm9::chr17:34406308..34406333,-p@chr17:34406308..34406333
-
Mm9::chr17:34406352..34406355,-p@chr17:34406352..34406355
-
Mm9::chr17:34419832..34419841,-p@chr17:34419832..34419841
-
Mm9::chr17:34419860..34419871,-p@chr17:34419860..34419871
-
Mm9::chr17:34423136..34423144,+p@chr17:34423136..34423144
+
Mm9::chr17:34424055..34424098,-p3@H2-Aa
Mm9::chr17:34424916..34424928,+p@chr17:34424916..34424928
+
Mm9::chr17:34424937..34424966,-p2@H2-Aa
Mm9::chr17:34424964..34424970,+p@chr17:34424964..34424970
+
Mm9::chr17:34428622..34428661,-p@chr17:34428622..34428661
-
Mm9::chr17:34428763..34428773,+p@chr17:34428763..34428773
+
Mm9::chr17:34428799..34428800,+p@chr17:34428799..34428800
+
Mm9::chr17:34430368..34430375,-p@chr17:34430368..34430375
-
Mm9::chr17:34430786..34430793,+p@chr17:34430786..34430793
+
Mm9::chr17:34430813..34430825,+p@chr17:34430813..34430825
+
Mm9::chr17:34430851..34430862,+p@chr17:34430851..34430862
+
Mm9::chr17:34430866..34430879,+p@chr17:34430866..34430879
+
Mm9::chr17:34433051..34433065,-p@chr17:34433051..34433065
-
Mm9::chr17:34433110..34433123,-p@chr17:34433110..34433123
-
Mm9::chr17:34436592..34436620,+p@chr17:34436592..34436620
+
Mm9::chr17:34437805..34437821,+p@chr17:34437805..34437821
+
Mm9::chr17:34438090..34438108,-p@chr17:34438090..34438108
-
Mm9::chr17:34438137..34438151,-p@chr17:34438137..34438151
-
Mm9::chr17:34438409..34438427,+p@chr17:34438409..34438427
+
Mm9::chr17:34441807..34441816,-p@chr17:34441807..34441816
-
Mm9::chr17:34441954..34441959,+p@chr17:34441954..34441959
+
Mm9::chr17:34441986..34442007,+p@chr17:34441986..34442007
+
Mm9::chr17:34442013..34442020,+p@chr17:34442013..34442020
+
Mm9::chr17:34443531..34443546,+p@chr17:34443531..34443546
+
Mm9::chr17:34443593..34443600,+p@chr17:34443593..34443600
+
Mm9::chr17:34443608..34443617,+p@chr17:34443608..34443617
+
Mm9::chr17:34443692..34443705,+p@chr17:34443692..34443705
+
Mm9::chr17:34452031..34452042,+p@chr17:34452031..34452042
+
Mm9::chr17:34484604..34484623,-p@chr17:34484604..34484623
-
Mm9::chr17:48439277..48439290,+p8@Treml2
Mm9::chr17:50320568..50320576,+p@chr17:50320568..50320576
+
Mm9::chr17:50321876..50321895,-p@chr17:50321876..50321895
-
Mm9::chr17:50657405..50657411,+p@chr17:50657405..50657411
+
Mm9::chr17:5803335..5803362,-p@chr17:5803335..5803362
-
Mm9::chr17:5803910..5803923,+p@chr17:5803910..5803923
+
Mm9::chr17:5804621..5804633,+p@chr17:5804621..5804633
+
Mm9::chr17:5804655..5804661,+p@chr17:5804655..5804661
+
Mm9::chr17:7020935..7020955,+p@chr17:7020935..7020955
+
Mm9::chr17:7032818..7032832,+p@chr17:7032818..7032832
+
Mm9::chr17:71201096..71201114,-p6@Tgif1
Mm9::chr17:75904423..75904434,-p@chr17:75904423..75904434
-
Mm9::chr17:8388813..8388822,+p@chr17:8388813..8388822
+
Mm9::chr17:8388829..8388841,+p@chr17:8388829..8388841
+
Mm9::chr17:8431195..8431202,+p@chr17:8431195..8431202
+
Mm9::chr17:88442036..88442081,+p@chr17:88442036..88442081
+
Mm9::chr17:88511431..88511453,+p@chr17:88511431..88511453
+
Mm9::chr17:88590349..88590360,+p@chr17:88590349..88590360
+
Mm9::chr18:3280995..3281013,-p23@Crem
Mm9::chr18:49932229..49932239,-p@chr18:49932229..49932239
-
Mm9::chr18:49932446..49932479,+p@chr18:49932446..49932479
+
Mm9::chr18:54037378..54037410,+p@chr18:54037378..54037410
+
Mm9::chr18:60965596..60965622,+p@chr18:60965596..60965622
+
Mm9::chr18:60966651..60966678,+p@chr18:60966651..60966678
+
Mm9::chr18:60967731..60967738,-p@chr18:60967731..60967738
-
Mm9::chr18:60971893..60971916,-p@chr18:60971893..60971916
-
Mm9::chr18:60971922..60971931,+p@chr18:60971922..60971931
+
Mm9::chr18:60972002..60972009,-p@chr18:60972002..60972009
-
Mm9::chr18:60972126..60972144,-p@chr18:60972126..60972144
-
Mm9::chr18:60972149..60972183,-p@chr18:60972149..60972183
-
Mm9::chr18:60972189..60972216,-p@chr18:60972189..60972216
-
Mm9::chr18:60972211..60972220,+p@chr18:60972211..60972220
+
Mm9::chr18:60972250..60972259,-p@chr18:60972250..60972259
-
Mm9::chr18:60972295..60972303,-p@chr18:60972295..60972303
-
Mm9::chr18:86771357..86771368,+p@chr18:86771357..86771368
+
Mm9::chr19:11559830..11559844,-p@chr19:11559830..11559844
-
Mm9::chr19:11569065..11569093,-p@chr19:11569065..11569093
-
Mm9::chr19:32829406..32829411,+p@chr19:32829406..32829411
+
Mm9::chr19:38100307..38100320,-p@chr19:38100307..38100320
-
Mm9::chr19:44451271..44451287,+p@chr19:44451271..44451287
+
Mm9::chr19:44452684..44452696,-p@chr19:44452684..44452696
-
Mm9::chr19:44463006..44463065,-p@chr19:44463006..44463065
-
Mm9::chr19:44482510..44482528,+p@chr19:44482510..44482528
+
Mm9::chr1:130504551..130504563,-p@chr1:130504551..130504563
-
Mm9::chr1:132747310..132747319,+p@chr1:132747310..132747319
+
Mm9::chr1:132770742..132770748,+p@chr1:132770742..132770748
+
Mm9::chr1:132772734..132772738,-p@chr1:132772734..132772738
-
Mm9::chr1:155152147..155152159,+p1@ENSMUST00000110797
Mm9::chr1:161922703..161922705,+p@chr1:161922703..161922705
+
Mm9::chr1:161977629..161977639,-p@chr1:161977629..161977639
-
Mm9::chr1:161977641..161977648,-p@chr1:161977641..161977648
-
Mm9::chr1:162177746..162177768,-p@chr1:162177746..162177768
-
Mm9::chr1:182129930..182129947,+p@chr1:182129930..182129947
+
Mm9::chr1:182471696..182471746,+p@chr1:182471696..182471746
+
Mm9::chr1:38959711..38959736,+p@chr1:38959711..38959736
+
Mm9::chr1:75521563..75521574,+p@chr1:75521563..75521574
+
Mm9::chr1:85102664..85102668,+p2@ENSMUST00000162353
p2@uc007btk.1
p2@uc007btl.1
p2@uc007btm.1
Mm9::chr1:87497225..87497236,+p6@Gm2427
p6@Sp140
Mm9::chr1:87497247..87497279,+p2@Gm2427
p2@Sp140
Mm9::chr1:87501082..87501114,-p@chr1:87501082..87501114
-
Mm9::chr1:89522086..89522106,+p@chr1:89522086..89522106
+
Mm9::chr1:89547224..89547250,-p@chr1:89547224..89547250
-
Mm9::chr2:163456664..163456677,+p@chr2:163456664..163456677
+
Mm9::chr2:6177330..6177334,-p@chr2:6177330..6177334
-
Mm9::chr2:70769189..70769223,+p@chr2:70769189..70769223
+
Mm9::chr2:93003092..93003108,-p@chr2:93003092..93003108
-
Mm9::chr3:153684303..153684310,+p@chr3:153684303..153684310
+
Mm9::chr3:52200465..52200474,+p@chr3:52200465..52200474
+
Mm9::chr3:52438368..52438377,-p@chr3:52438368..52438377
-
Mm9::chr3:52438406..52438413,-p@chr3:52438406..52438413
-
Mm9::chr3:52558967..52558978,-p@chr3:52558967..52558978
-
Mm9::chr3:58321410..58321423,+p@chr3:58321410..58321423
+
Mm9::chr3:58321459..58321468,+p@chr3:58321459..58321468
+
Mm9::chr3:83843300..83843304,+p@chr3:83843300..83843304
+
Mm9::chr3:95776380..95776402,+p@chr3:95776380..95776402
+
Mm9::chr4:108133424..108133447,+p@chr4:108133424..108133447
+
Mm9::chr4:120687224..120687245,-p@chr4:120687224..120687245
-
Mm9::chr4:130471927..130471934,+p@chr4:130471927..130471934
+
Mm9::chr4:132715162..132715169,-p@chr4:132715162..132715169
-
Mm9::chr4:132715176..132715188,-p@chr4:132715176..132715188
-
Mm9::chr4:132715206..132715215,-p@chr4:132715206..132715215
-
Mm9::chr4:135637900..135637922,+p@chr4:135637900..135637922
+
Mm9::chr4:32254258..32254280,-p@chr4:32254258..32254280
-
Mm9::chr4:32307111..32307115,+p@chr4:32307111..32307115
+
Mm9::chr4:44539619..44539621,-p@chr4:44539619..44539621
-
Mm9::chr4:44718315..44718319,+p@chr4:44718315..44718319
+
Mm9::chr4:44723786..44723790,+p@chr4:44723786..44723790
+
Mm9::chr5:101028282..101028287,-p@chr5:101028282..101028287
-
Mm9::chr5:101109088..101109124,-p@chr5:101109088..101109124
-
Mm9::chr5:106113365..106113380,+p@chr5:106113365..106113380
+
Mm9::chr5:108370506..108370532,+p@chr5:108370506..108370532
+
Mm9::chr5:113874732..113874736,+p@chr5:113874732..113874736
+
Mm9::chr5:118360032..118360038,+p@chr5:118360032..118360038
+
Mm9::chr5:148150622..148150656,-p@chr5:148150622..148150656
-
Mm9::chr5:99765779..99765787,+p@chr5:99765779..99765787
+
Mm9::chr5:99765795..99765803,+p@chr5:99765795..99765803
+
Mm9::chr6:70676861..70676881,-p@chr6:70676861..70676881
-
Mm9::chr6:70694000..70694011,-p@chr6:70694000..70694011
-
Mm9::chr6:8454114..8454125,+p@chr6:8454114..8454125
+
Mm9::chr6:90714417..90714448,+p@chr6:90714417..90714448
+
Mm9::chr6:99003463..99003469,+p@chr6:99003463..99003469
+
Mm9::chr6:99007289..99007325,-p@chr6:99007289..99007325
-
Mm9::chr6:99139076..99139100,+p@chr6:99139076..99139100
+
Mm9::chr6:99250293..99250307,-p@chr6:99250293..99250307
-
Mm9::chr6:99284326..99284351,-p@chr6:99284326..99284351
-
Mm9::chr6:99290540..99290551,+p@chr6:99290540..99290551
+
Mm9::chr7:133551963..133551966,+p@chr7:133551963..133551966
+
Mm9::chr7:133555720..133555743,-p@chr7:133555720..133555743
-
Mm9::chr7:133558306..133558315,-p4@Cd19
Mm9::chr7:25684141..25684152,+p@chr7:25684141..25684152
+
Mm9::chr7:25684171..25684185,+p@chr7:25684171..25684185
+
Mm9::chr7:29612650..29612651,+p@chr7:29612650..29612651
+
Mm9::chr7:51786904..51786948,+p@chr7:51786904..51786948
+
Mm9::chr8:108576981..108576998,+p@chr8:108576981..108576998
+
Mm9::chr8:108578502..108578511,+p@chr8:108578502..108578511
+
Mm9::chr8:126477650..126477653,-p@chr8:126477650..126477653
-
Mm9::chr8:126477670..126477676,-p@chr8:126477670..126477676
-
Mm9::chr8:126477910..126477941,+p@chr8:126477910..126477941
+
Mm9::chr8:26163314..26163320,-p@chr8:26163314..26163320
-
Mm9::chr8:26215263..26215278,-p@chr8:26215263..26215278
-
Mm9::chr8:26228712..26228754,+p@chr8:26228712..26228754
+
Mm9::chr8:26229551..26229567,-p@chr8:26229551..26229567
-
Mm9::chr8:48019831..48019868,+p@chr8:48019831..48019868
+
Mm9::chr8:86272074..86272079,-p@chr8:86272074..86272079
-
Mm9::chr8:95073172..95073173,+p@chr8:95073172..95073173
+
Mm9::chr9:105560809..105560819,+p@chr9:105560809..105560819
+
Mm9::chr9:105560828..105560835,+p@chr9:105560828..105560835
+
Mm9::chr9:108960229..108960237,-p@chr9:108960229..108960237
-
Mm9::chr9:115408759..115408777,-p@chr9:115408759..115408777
-
Mm9::chr9:116128090..116128095,-p@chr9:116128090..116128095
-
Mm9::chr9:13639945..13639948,+p@chr9:13639945..13639948
+
Mm9::chr9:32425275..32425296,+p@chr9:32425275..32425296
+
Mm9::chr9:32460087..32460095,+p@chr9:32460087..32460095
+
Mm9::chr9:41946897..41946902,+p@chr9:41946897..41946902
+
Mm9::chr9:44330218..44330249,+p@chr9:44330218..44330249
+
Mm9::chr9:44381518..44381530,-p@chr9:44381518..44381530
-
Mm9::chr9:50582324..50582332,+p@chr9:50582324..50582332
+
Mm9::chr9:51024124..51024131,-p@chr9:51024124..51024131
-
Mm9::chr9:56996024..56996047,-p6@Neil1
Mm9::chr9:64645511..64645518,+p@chr9:64645511..64645518
+
Mm9::chrX:106392111..106392133,+p1@Gm6377
Mm9::chrX:106392141..106392157,+p2@Gm6377
Mm9::chrX:106392161..106392168,+p4@Gm6377
Mm9::chrX:11656395..11656402,-p@chrX:11656395..11656402
-
Mm9::chrX:163529882..163529910,-p@chrX:163529882..163529910
-


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0042613MHC class II protein complex1.55191553180717e-07
GO:0002504antigen processing and presentation of peptide or polysaccharide antigen via MHC class II9.06295233755402e-07
GO:0042611MHC protein complex2.7204030597921e-06
GO:0019882antigen processing and presentation4.49653694636479e-05
GO:0019886antigen processing and presentation of exogenous peptide antigen via MHC class II4.58353864721288e-05
GO:0002495antigen processing and presentation of peptide antigen via MHC class II4.58353864721288e-05
GO:0002478antigen processing and presentation of exogenous peptide antigen4.58353864721288e-05
GO:0005764lysosome4.58353864721288e-05
GO:0000323lytic vacuole4.58353864721288e-05
GO:0005773vacuole7.32728327283874e-05
GO:0019884antigen processing and presentation of exogenous antigen8.05484079028954e-05
GO:0048002antigen processing and presentation of peptide antigen0.000247572829146773
GO:0009897external side of plasma membrane0.000451747479939822
GO:0043234protein complex0.000533363449890323
GO:0005771multivesicular body0.00122866523670196
GO:0009986cell surface0.00122866523670196
GO:0042605peptide antigen binding0.00165446978722749
GO:0045582positive regulation of T cell differentiation0.00187383336418751
GO:0032991macromolecular complex0.00249064539573452
GO:0045621positive regulation of lymphocyte differentiation0.00267770237827564
GO:0045580regulation of T cell differentiation0.00329876706340969
GO:0045619regulation of lymphocyte differentiation0.00583468301179603
GO:0005770late endosome0.0077224873319607
GO:0005886plasma membrane0.00988843316140974
GO:0044459plasma membrane part0.0114310786246954
GO:0002376immune system process0.0149747073540423
GO:0050870positive regulation of T cell activation0.0149747073540423
GO:0046645positive regulation of gamma-delta T cell activation0.0149747073540423
GO:0045586regulation of gamma-delta T cell differentiation0.0149747073540423
GO:0008418protein N-terminal asparagine amidohydrolase activity0.0149747073540423
GO:0045588positive regulation of gamma-delta T cell differentiation0.0149747073540423
GO:0046643regulation of gamma-delta T cell activation0.0149747073540423
GO:0030305heparanase activity0.0149747073540423
GO:0006955immune response0.0212197630768982
GO:0051251positive regulation of lymphocyte activation0.0240930797130199
GO:0030217T cell differentiation0.0240930797130199
GO:0050863regulation of T cell activation0.0240930797130199
GO:0043366beta selection0.0240930797130199
GO:0046629gamma-delta T cell activation0.0240930797130199
GO:0008432JUN kinase binding0.0240930797130199
GO:0042492gamma-delta T cell differentiation0.0240930797130199
GO:0043235receptor complex0.029038299686153
GO:0032632interleukin-3 production0.029038299686153
GO:0045423regulation of granulocyte macrophage colony-stimulating factor biosynthetic process0.029038299686153
GO:0042223interleukin-3 biosynthetic process0.029038299686153
GO:0046638positive regulation of alpha-beta T cell differentiation0.029038299686153
GO:0045399regulation of interleukin-3 biosynthetic process0.029038299686153
GO:0032604granulocyte macrophage colony-stimulating factor production0.029038299686153
GO:0045425positive regulation of granulocyte macrophage colony-stimulating factor biosynthetic process0.029038299686153
GO:0045401positive regulation of interleukin-3 biosynthetic process0.029038299686153
GO:0042253granulocyte macrophage colony-stimulating factor biosynthetic process0.029038299686153
GO:0051249regulation of lymphocyte activation0.0319209438575822
GO:0050865regulation of cell activation0.0334504558785296
GO:0043306positive regulation of mast cell degranulation0.0334504558785296
GO:0046637regulation of alpha-beta T cell differentiation0.0334504558785296
GO:0043304regulation of mast cell degranulation0.0334504558785296
GO:0001820serotonin secretion0.0334504558785296
GO:0008534oxidized purine base lesion DNA N-glycosylase activity0.0334504558785296
GO:0043302positive regulation of leukocyte degranulation0.0334504558785296
GO:0030098lymphocyte differentiation0.0338301193238895
GO:0004716receptor signaling protein tyrosine kinase activity0.0362601119580879
GO:0004067asparaginase activity0.0362601119580879
GO:0044440endosomal part0.0362601119580879
GO:0043300regulation of leukocyte degranulation0.0362601119580879
GO:0000702oxidized base lesion DNA N-glycosylase activity0.0362601119580879
GO:0045579positive regulation of B cell differentiation0.0362601119580879
GO:0010008endosome membrane0.0362601119580879
GO:0007044cell-substrate junction assembly0.0362601119580879
GO:0016798hydrolase activity, acting on glycosyl bonds0.0401820961298792
GO:0045921positive regulation of exocytosis0.0413185711777597
GO:0019815B cell receptor complex0.0413185711777597
GO:0003823antigen binding0.0413185711777597
GO:0042110T cell activation0.0436502832841474
GO:0005765lysosomal membrane0.0436502832841474
GO:0050853B cell receptor signaling pathway0.0436502832841474
GO:0043303mast cell degranulation0.0436502832841474
GO:0002448mast cell mediated immunity0.0436502832841474
GO:0003906DNA-(apurinic or apyrimidinic site) lyase activity0.0436502832841474
GO:0046641positive regulation of alpha-beta T cell proliferation0.0436502832841474
GO:0002521leukocyte differentiation0.0473977546165589
GO:0001958endochondral ossification0.0477832998932027
GO:0046635positive regulation of alpha-beta T cell activation0.0477832998932027
GO:0042277peptide binding0.0477832998932027



Relative expression of the co-expression cluster over median <br>Analyst:


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Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>

Cell Type
Ontology termp-valuen

Uber Anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}

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