FFCP PHASE1:Hg19::chr19:46000553..46000584,-
From FANTOM5_SSTAR
| Short description: | p3@RTN2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_RTN2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -240bp_to_ENST00000344680, NM_206900, uc002pcb.2, uc002pcc.2, uc002pcd.2_5end |
| EntrezGene: | RTN2 |
| HGNC: | 10468 |
| UniProt: | O75298Q7RTM9Q96CG9 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p3@RTN2 |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mucosa of oral region | 9.39e-08 | 4 |
| respiratory system mucosa | 9.39e-08 | 4 |
| Ontology term | p-value | n |
|---|---|---|
| cancer | 4.22e-19 | 235 |
| disease of cellular proliferation | 1.80e-18 | 239 |
| cell type cancer | 2.07e-17 | 143 |
| carcinoma | 2.61e-11 | 106 |
| squamous cell carcinoma | 1.82e-10 | 14 |
| gastrointestinal system cancer | 4.51e-10 | 14 |
| organ system cancer | 4.53e-10 | 137 |
| adenocarcinoma | 4.09e-09 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
