NonredundantMotifs:20

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known20
• db :UNIPROBE
• Id :Gmeb1_primary
• name :SCI09
• score :0.6275573267230993
  
• External refs:

EntrezGene:10691
UniProt:10691

• Internal refs:

EntrezGene:10691

Motif matrix

P0 A C G T 1 0.166568766856209 0.264627108388554 0.345569142484832 0.223234982270405 2 0.33559928597741 0.314450610927775 0.153335527947911 0.196614575146903 3 0.105350177962422 0.231838574306408 0.348017956536648 0.314793291194522 4 0.131273546627942 0.215623354635515 0.291288121053264 0.361814977683279 5 0.125569694828312 0.0723405433039333 0.404847922626842 0.397241839240913 6 0.0498787196364293 0.0391102710274104 0.325166661310853 0.585844348025307 7 0.705097892800264 0.009201616401007 0.284757379772287 0.000943111026442243 8 0.00353499698110437 0.986983062531775 0.0042753772905585 0.00520656319656203 9 0.00520656319656203 0.0042753772905585 0.986983062531775 0.00353499698110437 10 0.000943111026442243 0.284757379772287 0.009201616401007 0.705097892800264 11 0.585844348025307 0.325166661310853 0.0391102710274104 0.0498787196364293 12 0.397241839240913 0.404847922626842 0.0723405433039333 0.125569694828312 13 0.20685699747934 0.234554986714772 0.371730556802614 0.186857459003274 14 0.435956762345371 0.145114819741633 0.181032594493967 0.237895823419029 15 0.176103786632641 0.260126809366949 0.230769700644802 0.332999703355608 16 0.272101580475796 0.213365385159242 0.312031811553531 0.202501222811432 17 0.237402122772389 0.250981758957196 0.266976765334794 0.244639352935621