NonredundantMotifs:21

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known21
• db :HOCOMOCO
• Id :SP2_si
• name  :
• score :4.312902901611167
  
• External refs:

EntrezGene:6668
UniProt:6668

• Internal refs:

EntrezGene:6668

Motif matrix

P0 A C G T 1 7.178680981595098 5.022239263803676 12.626533742331297 6.157208588957061 2 12.711656441717777 3.6319018404907886 9.647239263803666 4.993865030674838 3 6.809815950920249 0.9079754601226988 17.251533742331286 6.015337423312876 4 1.8159509202453976 0.9079754601226988 15.32208588957056 12.938650306748471 5 5.901840490797528 3.8588957055214848 18.27300613496932 2.9509202453987706 6 6.923312883435566 3.0644171779141085 20.996932515337424 0.0 7 0.0 0.0 30.9846625766871 0.0 8 0.0 4.085889570552149 26.898773006134952 0.0 9 2.8374233128834345 19.18098159509201 8.966257668711641 0.0 10 2.042944785276071 2.042944785276071 26.898773006134952 0.0 11 0.0 3.8588957055214848 22.358895705521444 4.766871165644174 12 13.733128834355814 0.0 15.32208588957056 1.9294478527607362 13 11.236196319018411 5.107361963190186 14.641104294478534 0.0 14 4.880368098159522 13.619631901840497 6.355828220858888 6.128834355828223 15 2.9509202453987706 6.355828220858888 6.4693251533742355 15.20858895705521 16 19.861963190184035 1.8159509202453976 7.263803680981577 2.042944785276071 17 16.343558282208566 4.766871165644174 5.788343558282212 4.085889570552149