NonredundantMotifs:71

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known71
• db :HOCOMOCO
• Id :PIT1_f1
• name  :
• score :0.06673532507808184
  
• External refs:

EntrezGene:5449
UniProt:5449

• Internal refs:

EntrezGene:5449

Motif matrix

P0 A C G T 1 3.0896624472573873 16.79430379746835 4.558016877637143 13.368143459915627 2 8.810126582278482 5.38396624472576 1.7130801687763726 21.902953586497915 3 15.172995780590723 16.886075949367104 4.772151898734191 0.9789029535865001 4 24.96202531645569 4.037974683544292 0.0 8.810126582278482 5 3.1814345991561206 0.0 0.0 34.628691983122394 6 0.611814345991562 0.0 37.19831223628693 0.0 7 21.535864978902964 6.240506329113913 5.139240506329102 4.894514767932482 8 34.75105485232069 0.0 0.0 3.059071729957807 9 10.278481012658244 0.0 1.8354430379746827 25.69620253164559 10 33.28270042194093 0.0 1.223628691983124 3.303797468354431 11 9.911392405063294 0.0 0.0 27.898734177215207 12 20.189873417721536 0.0 5.873417721519001 11.746835443037964 13 6.301687763713096 11.808016877637147 4.955696202531666 14.744725738396628