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NonredundantMotifs:15

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :known15
  • db :HOCOMOCO
  • Id :IRF4_si
  • name  :
  • score :1.488155978935132
  • External refs:
EntrezGene:3662
UniProt:3662

  • Internal refs:
EntrezGene:3662


Motif matrix
P0ACGT
1812.0220965888938337.92796193918946419.51567969119344213.10847329094975
21114.8485059362908127.1410871122624245.98066853689852294.6039499247774
31127.7730815375821103.1977571431449319.6308311419565231.97254168754546
41040.976146416572237.412577781325524394.9808272207566309.2046600915737
5782.838815349718200.3199728442578666.9077608161709132.50766250008104
61147.4644365133604101.81288838674526346.4188937536387186.87799285648484
7411.63408441821011.97810740423706321354.97769288316313.984326804618343
8906.38331672349492.3824932496579687873.19045273958090.6179487974938186
91777.97307879763254.6011327125995440.00.0
101778.4660762884960.6144259133089341.96921291511262481.5244963933138587
11664.850272291718612.2483335386709504.89913011575490.5764755640830157
12443.5764332446058169.47194472656992168.350412170876581001.1754213681763
13304.861263357302386.762321672354451361.964628981014428.98599749955608
141586.977264097350643.972703871132055123.3314290465340528.292814495212987
151258.45810608796534.891255917742114487.54937689438591.6754726101381874
161577.535726705985690.21685079585978113.582586447132971.2390475612520513

Sub Motif Members