NonredundantMotifs:51

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known51
• db :SWISSREGULON
• Id :GFI1.p2
• name :GFI1
• score :0.27937420369664345
  
• External refs:

EntrezGene:GFI1
UniProt:GFI1

• Internal refs:

EntrezGene:GFI1

Motif matrix
PO A C G T 1 37.711504 545.640392 68.411948 131.319303 2 307.79035 447.443043 27.849754 0 3 781.753104999999 0 1.330042 0 4 783.083146999999 0 0 0 5 0 0 0 783.083146999999 6 1.495057 780.088571999999 0 1.499518 7 594.020252 85.668461 44.560901 58.833533 8 55.42408 471.53301 196.953489 59.172568 9 339.399882 233.557475 9.343329 200.782461 10 118.007463 88.737423 550.590646 25.747615