NonredundantMotifs:58

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known58
• db :HOCOMOCO
• Id :NR0B1_si
• name  :
• score :3.268553894711853
  
• External refs:

EntrezGene:190
UniProt:190

• Internal refs:

EntrezGene:190

Motif matrix

P0 A C G T 1 0.2072368421052633 2.220394736842101 5.536184210526312 1.036184210526312 2 3.0789473684210553 5.921052631578945 0.0 0.0 3 0.947368421052633 0.0 8.052631578947368 0.0 4 1.065789473684211 0.0 3.197368421052633 4.736842105263156 5 0.0 0.0 9.0 0.0 6 0.0 1.776315789473688 7.223684210526312 0.0 7 1.894736842105266 0.0 6.157894736842102 0.947368421052633 8 6.868421052631579 1.065789473684211 1.065789473684211 0.0 9 1.776315789473688 3.3157894736842106 3.907894736842101 0.0 10 5.092105263157898 0.0 3.907894736842101 0.0