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NonredundantMotifs:42

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant42
  • db :UNIPROBE
  • Id :Sry_primary
  • name :SCI09
  • score :0.042468679857074566
  • External refs:
EntrezGene:6736
UniProt:6736

  • Internal refs:
EntrezGene:6736


Motif matrix
P0ACGT
10.1735539108214850.2446470108784870.2487354947103490.333063583589678
20.3171065619765750.2594594879596380.1182954372638680.305138512799919
30.2406624220130450.1811920781724510.2475350437916990.330610456022805
40.4312194605947410.1566114224129540.141439761878040.270729355114265
50.958925280727660.0112897227983930.00688193333284070.0229030631411059
60.0491105053564610.01106500403064410.01284309812148080.926981392491414
70.07212991216161680.01313982275095030.006115175034701170.908615090052732
80.9174556237831460.003885780462797080.06986049042321830.00879810533083873
90.008798105330838730.06986049042321830.003885780462797080.917455623783146
100.9086150900527320.006115175034701170.01313982275095030.0721299121616168
110.9269813924914140.01284309812148080.01106500403064410.049110505356461
120.02290306314110590.00688193333284070.0112897227983930.95892528072766
130.4226561108528280.1362476155584680.2660008194946990.175095454094004
140.3361605314771870.1219464694049510.1771879581099790.364705041007882
150.2473573213235320.09715331479639610.248928640379510.406560723500562
160.246368737907920.3216703314269850.2221240235542560.209836907110839

Sub Motif Members