NonredundantMotifs:161

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant161
• db :UNIPROBE
• Id :Tcf3_secondary
• name :SCI09
• score :0.005818554593992047
  
• External refs:

EntrezGene:6929
UniProt:6929

• Internal refs:

EntrezGene:6929

Motif matrix

P0 A C G T 1 0.337360773033156 0.181847977548516 0.282899922228275 0.197891327190053 2 0.192381746250749 0.237864199583053 0.390654768803585 0.179099285362614 3 0.134396669993062 0.374784928276613 0.355692549986183 0.135125851744141 4 0.113674629695326 0.477609064918589 0.347987885586672 0.0607284197994129 5 0.187410878961973 0.212669418109555 0.392109140443397 0.207810562485075 6 0.497832366135208 0.111474097760759 0.194855153898222 0.195838382205811 7 0.526042548104382 0.126711897431175 0.214264714198468 0.132980840265976 8 0.433875715897945 0.180022889133487 0.104859845650795 0.281241549317774 9 0.539525437220504 0.140191847800165 0.113373951274975 0.206908763704357 10 0.397300566969792 0.176841563453792 0.115802258798458 0.310055610777958 11 0.529440699119821 0.199806502920201 0.148594621260007 0.122158176699972 12 0.4850352838372 0.166230925472943 0.150350092347644 0.198383698342214 13 0.532478842630498 0.165909783352405 0.177757490306664 0.123853883710433 14 0.35118908553611 0.173665229150724 0.138509068698377 0.336636616614788 15 0.26068807693612 0.223763841128377 0.189060223277131 0.326487858658372