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NonredundantMotifs:11

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Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant11
  • db :JASPAR
  • Id :MA0065.2
  • name :PPARG::RXRA
  • score :0.40344014069097944
  • External refs:
EntrezGene:5468
UniProt:5468

EntrezGene:6256
UniProt:6256

  • Internal refs:
EntrezGene:5468

EntrezGene:6256


Motif matrix
P0ACGT
194317320126
2101166127464
33902336879
4100367187
51391567434
6145129395193
77154717966
881921158
95224827023
1071351379
1182276712
12419693120
132299263479
1454555144109
15676584781

Sub Motif Members