Template:Known motif

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name  :{{{name}}}
• db  :{{{representative_motif_db}}}
• Id  :{{{representative_motif_id}}}
• name  :{{{representative_motif_name}}}
• score  :{{{score}}}
  
• External refs:

EntrezGene:{{{entrez_gene_id}}}  UniProt:{{{entrez_gene_id}}}

• Internal refs:

[[EntrezGene:{{{entrez_gene_id}}}]]

Motif matrix
{{{PWM}}}