Personal tools

UBERON:0007376

From FANTOM5_SSTAR

Revision as of 11:43, 12 September 2014 by Autoedit (talk | contribs)
Jump to: navigation, search

Name:outer epithelial layer
Definition:"The epidermis is the entire outer epithelial layer of an animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species[GO]. The epidermis of a more complex invertebrate is just one-layer deep, and may be protected by a non-cellular cuticle. The epidermis of a higher vertebrate has many layers, and the outer layers are reinforced with keratin and then die[WP]." [Wikipedia:Epidermis_(zoology)]
Xrefs:
links:

FBbt:00004993
HAO:0000298
TADS:0000109

WBbt:0005733
Synonyms: "epidermis" NARROW [GO:0008544]
"hypodermis" RELATED INCONSISTENT [GO:0008544, WBbt:0005733]
"outer epidermal layer" EXACT []
Comments:Editor's note: this grouping class exists primarily to align with GO - see GO:0008544.
Subset: grouping_class

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0003102(surface structure),UBERON:0010371(ecto-epithelium)
develops_from:UBERON:0007383(enveloping layer of ectoderm)



Children

is a:UBERON:0001003 (skin epidermis)
part of:CL:0000362 (epidermal cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007376 (outer epithelial layer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
1.4e-86FFCP PHASE2:Mm9::chr15:101593988..101593997,-#_b16b93c98cbe7782d166a5c37413843ep1@Krt74
1.4e-86FFCP PHASE2:Mm9::chr4:138313406..138313411,-#_b16b93c98cbe7782d166a5c37413843ep2@Pla2g2f
1.4e-86FFCP PHASE2:Mm9::chr11:99227413..99227429,-#_b16b93c98cbe7782d166a5c37413843ep@chr11:99227413..99227429, -
1.4e-86FFCP PHASE2:Mm9::chr4:113836063..113836075,+#_b16b93c98cbe7782d166a5c37413843ep1@Skint11
1.4e-86FFCP PHASE2:Mm9::chr5:137057540..137057550,-#_b16b93c98cbe7782d166a5c37413843ep@chr5:137057540..137057550, -
1.4e-86FFCP PHASE1:Mm9::chr4:113836042..113836053,+#_b16b93c98cbe7782d166a5c37413843ep2@Skint11
1.4e-86FFCP PHASE1:Mm9::chr13:113381448..113381495,-#_b16b93c98cbe7782d166a5c37413843ep@chr13:113381448..113381495, -
1.4e-86FFCP PHASE1:Mm9::chr4:138313406..138313411,-#_b16b93c98cbe7782d166a5c37413843ep2@Pla2g2f
1.4e-86FFCP PHASE1:Mm9::chr5:137057540..137057550,-#_b16b93c98cbe7782d166a5c37413843ep@chr5:137057540..137057550, -
1.4e-86FFCP PHASE1:Mm9::chr4:113836063..113836075,+#_b16b93c98cbe7782d166a5c37413843ep1@Skint11
1.4e-86FFCP PHASE1:Mm9::chr1:191609138..191609151,+#_b16b93c98cbe7782d166a5c37413843ep@chr1:191609138..191609151, +
1.4e-86FFCP PHASE1:Mm9::chr11:36246521..36246530,-#_b16b93c98cbe7782d166a5c37413843ep@chr11:36246521..36246530, -
1.4e-86FFCP PHASE2:Mm9::chr13:113381448..113381495,-#_b16b93c98cbe7782d166a5c37413843ep@chr13:113381448..113381495, -
1.4e-86FFCP PHASE2:Mm9::chr1:191609138..191609151,+#_b16b93c98cbe7782d166a5c37413843ep@chr1:191609138..191609151, +
1.4e-86FFCP PHASE2:Mm9::chr11:36246521..36246530,-#_b16b93c98cbe7782d166a5c37413843ep@chr11:36246521..36246530, -
1.4e-86FFCP PHASE1:Mm9::chr11:94981134..94981147,+#_b16b93c98cbe7782d166a5c37413843ep2@Dlx3
1.4e-86FFCP PHASE2:Mm9::chr11:94981134..94981147,+#_b16b93c98cbe7782d166a5c37413843ep2@Dlx3
1.4e-86FFCP PHASE1:Mm9::chr11:99227413..99227429,-#_b16b93c98cbe7782d166a5c37413843ep@chr11:99227413..99227429, -
1.4e-86FFCP PHASE1:Mm9::chr15:101593988..101593997,-#_b16b93c98cbe7782d166a5c37413843ep1@Krt74
1.4e-86FFCP PHASE2:Mm9::chr4:113836042..113836053,+#_b16b93c98cbe7782d166a5c37413843ep2@Skint11
1.07e-72FFCP PHASE1:Mm9::chr5:137057441..137057450,-#_ab50f2c2a5b082d1226f8e7c9566880bp@chr5:137057441..137057450, -
1.07e-72FFCP PHASE2:Mm9::chr1:133938531..133938534,-#_ab50f2c2a5b082d1226f8e7c9566880bp6@Mfsd4
1.07e-72FFCP PHASE1:Mm9::chr11:99207849..99207853,-#_ab50f2c2a5b082d1226f8e7c9566880bp@chr11:99207849..99207853, -
1.07e-72FFCP PHASE1:Mm9::chr5:137057490..137057506,-#_ab50f2c2a5b082d1226f8e7c9566880bp@chr5:137057490..137057506, -
1.07e-72FFCP PHASE1:Mm9::chr1:133938531..133938534,-#_ab50f2c2a5b082d1226f8e7c9566880bp6@Mfsd4
1.07e-72FFCP PHASE2:Mm9::chr3:90343597..90343613,+#_ab50f2c2a5b082d1226f8e7c9566880bp@chr3:90343597..90343613, +
1.07e-72FFCP PHASE2:Mm9::chr15:83953604..83953633,-#_ab50f2c2a5b082d1226f8e7c9566880bp1@Pnpla5
1.07e-72FFCP PHASE2:Mm9::chr11:99207849..99207853,-#_ab50f2c2a5b082d1226f8e7c9566880bp@chr11:99207849..99207853, -
1.07e-72FFCP PHASE2:Mm9::chr5:137057441..137057450,-#_ab50f2c2a5b082d1226f8e7c9566880bp@chr5:137057441..137057450, -
1.07e-72FFCP PHASE1:Mm9::chr1:46949894..46949911,-#_ab50f2c2a5b082d1226f8e7c9566880bp@chr1:46949894..46949911, -
1.07e-72FFCP PHASE1:Mm9::chr15:83953604..83953633,-#_ab50f2c2a5b082d1226f8e7c9566880bp1@Pnpla5
1.07e-72FFCP PHASE1:Mm9::chr3:90343597..90343613,+#_ab50f2c2a5b082d1226f8e7c9566880bp@chr3:90343597..90343613, +
1.07e-72FFCP PHASE1:Mm9::chr7:97432305..97432311,+#_ab50f2c2a5b082d1226f8e7c9566880bp@chr7:97432305..97432311, +
1.07e-72FFCP PHASE2:Mm9::chr7:127260268..127260277,+#_ab50f2c2a5b082d1226f8e7c9566880bp@chr7:127260268..127260277, +
1.07e-72FFCP PHASE2:Mm9::chr5:137057490..137057506,-#_ab50f2c2a5b082d1226f8e7c9566880bp@chr5:137057490..137057506, -
1.07e-72FFCP PHASE2:Mm9::chr1:46949894..46949911,-#_ab50f2c2a5b082d1226f8e7c9566880bp@chr1:46949894..46949911, -
1.07e-72FFCP PHASE1:Mm9::chr7:127260268..127260277,+#_ab50f2c2a5b082d1226f8e7c9566880bp@chr7:127260268..127260277, +
1.07e-72FFCP PHASE2:Mm9::chr7:97432305..97432311,+#_ab50f2c2a5b082d1226f8e7c9566880bp@chr7:97432305..97432311, +
1.5e-72FFCP PHASE1:Mm9::chr13:112045218..112045226,+#_902eea3bc12db94b4f184c07cba599a5p1@Actbl2
1.5e-72FFCP PHASE2:Mm9::chr3:138004932..138004945,+#_902eea3bc12db94b4f184c07cba599a5p@chr3:138004932..138004945, +
1.5e-72FFCP PHASE1:Mm9::chr6:134595955..134595965,-#_902eea3bc12db94b4f184c07cba599a5p@chr6:134595955..134595965, -
1.5e-72FFCP PHASE1:Mm9::chr3:138004932..138004945,+#_902eea3bc12db94b4f184c07cba599a5p@chr3:138004932..138004945, +
1.5e-72FFCP PHASE1:Mm9::chr6:97778311..97778326,+#_902eea3bc12db94b4f184c07cba599a5p@chr6:97778311..97778326, +
1.5e-72FFCP PHASE2:Mm9::chr13:112045218..112045226,+#_902eea3bc12db94b4f184c07cba599a5p1@Actbl2
1.5e-72FFCP PHASE1:Mm9::chr15:25672069..25672077,+#_902eea3bc12db94b4f184c07cba599a5p25@Myo10
1.5e-72FFCP PHASE2:Mm9::chr6:97778311..97778326,+#_902eea3bc12db94b4f184c07cba599a5p@chr6:97778311..97778326, +
1.5e-72FFCP PHASE2:Mm9::chr6:134595955..134595965,-#_902eea3bc12db94b4f184c07cba599a5p@chr6:134595955..134595965, -
1.5e-72FFCP PHASE1:Mm9::chr10:43724117..43724131,-#_902eea3bc12db94b4f184c07cba599a5p@chr10:43724117..43724131, -
1.5e-72FFCP PHASE1:Mm9::chr10:66991117..66991146,+#_902eea3bc12db94b4f184c07cba599a5p@chr10:66991117..66991146, +
1.5e-72FFCP PHASE2:Mm9::chr1:37973257..37973271,-#_902eea3bc12db94b4f184c07cba599a5p2@Lyg2
1.5e-72FFCP PHASE2:Mm9::chr15:25672069..25672077,+#_902eea3bc12db94b4f184c07cba599a5p25@Myo10
1.5e-72FFCP PHASE2:Mm9::chr10:43724117..43724131,-#_902eea3bc12db94b4f184c07cba599a5p@chr10:43724117..43724131, -
1.5e-72FFCP PHASE1:Mm9::chr1:37973257..37973271,-#_902eea3bc12db94b4f184c07cba599a5p2@Lyg2
1.5e-72FFCP PHASE2:Mm9::chr1:37973330..37973344,-#_902eea3bc12db94b4f184c07cba599a5p1@Lyg2
1.5e-72FFCP PHASE2:Mm9::chr10:66991117..66991146,+#_902eea3bc12db94b4f184c07cba599a5p@chr10:66991117..66991146, +
1.5e-72FFCP PHASE1:Mm9::chr1:37973330..37973344,-#_902eea3bc12db94b4f184c07cba599a5p1@Lyg2
2.1e-72FFCP PHASE2:Mm9::chr4:82496625..82496637,-#_af59c401765c35637add1bd23b9bd616p6@Zdhhc21
2.1e-72FFCP PHASE1:Mm9::chr1:89485356..89485361,+#_af59c401765c35637add1bd23b9bd616p@chr1:89485356..89485361, +
2.1e-72FFCP PHASE2:Mm9::chr4:111707315..111707319,+#_af59c401765c35637add1bd23b9bd616p@chr4:111707315..111707319, +
2.1e-72FFCP PHASE1:Mm9::chr4:111707315..111707319,+#_af59c401765c35637add1bd23b9bd616p@chr4:111707315..111707319, +
2.1e-72FFCP PHASE2:Mm9::chr7:117436977..117436981,-#_af59c401765c35637add1bd23b9bd616p@chr7:117436977..117436981, -
2.1e-72FFCP PHASE2:Mm9::chr1:89485356..89485361,+#_af59c401765c35637add1bd23b9bd616p@chr1:89485356..89485361, +
2.1e-72FFCP PHASE1:Mm9::chr7:117436977..117436981,-#_af59c401765c35637add1bd23b9bd616p@chr7:117436977..117436981, -
2.1e-72FFCP PHASE1:Mm9::chr4:82496625..82496637,-#_af59c401765c35637add1bd23b9bd616p6@Zdhhc21
4.13e-72FFCP PHASE2:Mm9::chr4:113672105..113672116,-#_c175d4adf8a8cbbc7e197813b49c8c12p1@Skint5
4.13e-72FFCP PHASE1:Mm9::chr4:113672105..113672116,-#_c175d4adf8a8cbbc7e197813b49c8c12p1@Skint5
1.65e-69FFCP PHASE1:Mm9::chr8:63958211..63958219,+#_b22648cca231035b73c4584b9585d74dp@chr8:63958211..63958219, +
1.65e-69FFCP PHASE1:Mm9::chr5:75107109..75107125,-#_b22648cca231035b73c4584b9585d74dp@chr5:75107109..75107125, -
1.65e-69FFCP PHASE2:Mm9::chr3:93249391..93249400,+#_b22648cca231035b73c4584b9585d74dp@chr3:93249391..93249400, +
1.65e-69FFCP PHASE2:Mm9::chrX:166374681..166374688,+#_b22648cca231035b73c4584b9585d74dp@chrX:166374681..166374688, +
1.65e-69FFCP PHASE1:Mm9::chr14:21082655..21082682,-#_b22648cca231035b73c4584b9585d74dp@chr14:21082655..21082682, -
1.65e-69FFCP PHASE1:Mm9::chrX:166374681..166374688,+#_b22648cca231035b73c4584b9585d74dp@chrX:166374681..166374688, +
1.65e-69FFCP PHASE2:Mm9::chr9:67169769..67169780,-#_b22648cca231035b73c4584b9585d74dp@chr9:67169769..67169780, -
1.65e-69FFCP PHASE1:Mm9::chr4:135527809..135527823,-#_b22648cca231035b73c4584b9585d74dp4@Lypla2
1.65e-69FFCP PHASE2:Mm9::chr14:57868950..57868959,+#_b22648cca231035b73c4584b9585d74dp@chr14:57868950..57868959, +
1.65e-69FFCP PHASE1:Mm9::chr4:144311356..144311370,-#_b22648cca231035b73c4584b9585d74dp2@Gm13178
1.65e-69FFCP PHASE1:Mm9::chr18:20469239..20469258,+#_b22648cca231035b73c4584b9585d74dp2@Dsg1a
1.65e-69FFCP PHASE2:Mm9::chr3:93248697..93248704,+#_b22648cca231035b73c4584b9585d74dp@chr3:93248697..93248704, +
1.65e-69FFCP PHASE2:Mm9::chr5:113617681..113617724,-#_b22648cca231035b73c4584b9585d74dp@chr5:113617681..113617724, -
1.65e-69FFCP PHASE2:Mm9::chr6:97778294..97778306,+#_b22648cca231035b73c4584b9585d74dp@chr6:97778294..97778306, +
1.65e-69FFCP PHASE2:Mm9::chr5:137057650..137057655,-#_b22648cca231035b73c4584b9585d74dp@chr5:137057650..137057655, -
1.65e-69FFCP PHASE1:Mm9::chr3:93247552..93247564,+#_b22648cca231035b73c4584b9585d74dp@chr3:93247552..93247564, +
1.65e-69FFCP PHASE1:Mm9::chr2:129949046..129949050,+#_b22648cca231035b73c4584b9585d74dp2@Tgm6
1.65e-69FFCP PHASE2:Mm9::chr1:192537956..192537958,+#_b22648cca231035b73c4584b9585d74dp@chr1:192537956..192537958, +
1.65e-69FFCP PHASE1:Mm9::chr16:56831979..56831988,-#_b22648cca231035b73c4584b9585d74dp13@Tmem45a
1.65e-69FFCP PHASE2:Mm9::chr16:56831979..56831988,-#_b22648cca231035b73c4584b9585d74dp13@Tmem45a
1.65e-69FFCP PHASE2:Mm9::chr18:25099958..25099967,+#_b22648cca231035b73c4584b9585d74dp@chr18:25099958..25099967, +
1.65e-69FFCP PHASE1:Mm9::chr3:93250018..93250027,+#_b22648cca231035b73c4584b9585d74dp@chr3:93250018..93250027, +
1.65e-69FFCP PHASE2:Mm9::chr3:93247570..93247579,+#_b22648cca231035b73c4584b9585d74dp@chr3:93247570..93247579, +
1.65e-69FFCP PHASE1:Mm9::chr19:59989963..59989986,-#_b22648cca231035b73c4584b9585d74dp@chr19:59989963..59989986, -
1.65e-69FFCP PHASE1:Mm9::chr19:25196775..25196781,+#_b22648cca231035b73c4584b9585d74dp@chr19:25196775..25196781, +
1.65e-69FFCP PHASE1:Mm9::chr11:115168521..115168541,+#_b22648cca231035b73c4584b9585d74dp1@Otop2
1.65e-69FFCP PHASE1:Mm9::chr3:93249140..93249149,+#_b22648cca231035b73c4584b9585d74dp@chr3:93249140..93249149, +
1.65e-69FFCP PHASE1:Mm9::chr9:43876286..43876293,+#_b22648cca231035b73c4584b9585d74dp@chr9:43876286..43876293, +
1.65e-69FFCP PHASE2:Mm9::chr1:53971472..53971483,-#_b22648cca231035b73c4584b9585d74dp@chr1:53971472..53971483, -
1.65e-69FFCP PHASE1:Mm9::chr10:82296700..82296710,+#_b22648cca231035b73c4584b9585d74dp12@Txnrd1
1.65e-69FFCP PHASE1:Mm9::chr17:14011908..14011919,+#_b22648cca231035b73c4584b9585d74dp13@Mllt4
1.65e-69FFCP PHASE2:Mm9::chr3:93249466..93249478,+#_b22648cca231035b73c4584b9585d74dp@chr3:93249466..93249478, +
1.65e-69FFCP PHASE1:Mm9::chr3:93249391..93249400,+#_b22648cca231035b73c4584b9585d74dp@chr3:93249391..93249400, +
1.65e-69FFCP PHASE2:Mm9::chr17:14011908..14011919,+#_b22648cca231035b73c4584b9585d74dp13@Mllt4