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UBERON:0000200

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Name:gyrus
Namespace:FANTOM
Definition:"A ridge, generally surrounded by one or more sulci." [Wikipedia:Gyrus]
Xrefs:
links:

BTO:0002495
FMA:83874
ncithesaurus:Cerebral_Gyrus

SCTID:279165009
Synonyms: "cerebral gyrus" EXACT [BTO:0002495]
"gyri" RELATED PLURAL [BTO:0002495]
"gyri of cerebrum" RELATED PLURAL [BTO:0002495]
"gyrus of cerebrum" RELATED [BTO:0002495]
"gyrus of neuraxis" EXACT [FMA:83874]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000064(organ part),UBERON:0004121(ectoderm-derived structure),UBERON:0010314(structure with developmental contribution from neural crest)
part_of:UBERON:0001869(cerebral hemisphere)



Children

is a:UBERON:0002581 (postcentral gyrus),UBERON:0002771 (middle temporal gyrus),UBERON:0007190 (paracentral gyrus),UBERON:0015593 (frontal gyrus)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000200 (gyrus), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.83e-98FFCP PHASE2:Hg19::chr5:160720498..160720507,-#_d6fea9d87e24f4d58ec4ce531d131623p@chr5:160720498..160720507, -
1.83e-98FFCP PHASE1:Hg19::chr5:160720498..160720507,-#_d6fea9d87e24f4d58ec4ce531d131623p@chr5:160720498..160720507, -
1.86e-98FFCP PHASE2:Hg19::chr3:123813487..123813494,+#_05f9b8ad78d1d6b9bc1a7da5b4ff9474p22@KALRN
1.86e-98FFCP PHASE1:Hg19::chr3:123813487..123813494,+#_05f9b8ad78d1d6b9bc1a7da5b4ff9474p22@KALRN
3.08e-98FFCP PHASE1:Hg19::chr2:76412119..76412138,+#_433d4e07d3ee327eb0c75ddafb2e22fdp@chr2:76412119..76412138, +
3.08e-98FFCP PHASE2:Hg19::chr2:76412119..76412138,+#_433d4e07d3ee327eb0c75ddafb2e22fdp@chr2:76412119..76412138, +
5.87e-85FFCP PHASE1:Hg19::chr21:16999573..16999589,-#_c3a0b1d297d7768fcc55bf1cec050422p@chr21:16999573..16999589, -
5.87e-85FFCP PHASE2:Hg19::chr21:16999573..16999589,-#_c3a0b1d297d7768fcc55bf1cec050422p@chr21:16999573..16999589, -
1.86e-84FFCP PHASE1:Hg19::chr4:90625735..90625756,-#_1f4f311c5ef369512da9b5db45c07c5ep@chr4:90625735..90625756, -
1.86e-84FFCP PHASE2:Hg19::chr4:90625735..90625756,-#_1f4f311c5ef369512da9b5db45c07c5ep@chr4:90625735..90625756, -
1.86e-84FFCP PHASE2:Hg19::chr12:45307764..45307772,-#_1f4f311c5ef369512da9b5db45c07c5ep16@NELL2
1.86e-84FFCP PHASE1:Hg19::chr12:45307764..45307772,-#_1f4f311c5ef369512da9b5db45c07c5ep16@NELL2
3.62e-82FFCP PHASE1:Hg19::chr18:5721892..5721909,+#_af0e897e88c6d556555feab94ba1ad7dp@chr18:5721892..5721909, +
3.62e-82FFCP PHASE2:Hg19::chr18:5721892..5721909,+#_af0e897e88c6d556555feab94ba1ad7dp@chr18:5721892..5721909, +
3.62e-82FFCP PHASE2:Hg19::chr21:16999470..16999481,-#_af0e897e88c6d556555feab94ba1ad7dp@chr21:16999470..16999481, -
3.62e-82FFCP PHASE1:Hg19::chr21:16999470..16999481,-#_af0e897e88c6d556555feab94ba1ad7dp@chr21:16999470..16999481, -
6.1e-79FFCP PHASE2:Hg19::chr10:79383809..79383833,+#_94bd336db2c9da009776ab4bd43336f3p@chr10:79383809..79383833, +
6.1e-79FFCP PHASE1:Hg19::chr10:79383809..79383833,+#_94bd336db2c9da009776ab4bd43336f3p@chr10:79383809..79383833, +
6.97e-79FFCP PHASE2:Hg19::chr21:16999597..16999614,-#_4d45ffee8057a96be7ac805f2a34da03p@chr21:16999597..16999614, -
6.97e-79FFCP PHASE2:Hg19::chr10:65820364..65820377,+#_4d45ffee8057a96be7ac805f2a34da03p@chr10:65820364..65820377, +
6.97e-79FFCP PHASE1:Hg19::chr21:16999597..16999614,-#_4d45ffee8057a96be7ac805f2a34da03p@chr21:16999597..16999614, -
6.97e-79FFCP PHASE1:Hg19::chr10:65820364..65820377,+#_4d45ffee8057a96be7ac805f2a34da03p@chr10:65820364..65820377, +
4.67e-75FFCP PHASE2:Hg19::chr12:40713926..40713942,+#_1c72e3f1e6f3be7951928f8b9984de91p14@LRRK2
4.67e-75FFCP PHASE1:Hg19::chr12:40713926..40713942,+#_1c72e3f1e6f3be7951928f8b9984de91p14@LRRK2
8.94e-75FFCP PHASE1:Hg19::chr8:27598379..27598404,-#_4b7891c472e61d03fa28a062c530e502p@chr8:27598379..27598404, -
8.94e-75FFCP PHASE2:Hg19::chr8:27598379..27598404,-#_4b7891c472e61d03fa28a062c530e502p@chr8:27598379..27598404, -
4.08e-74FFCP PHASE1:Hg19::chr2:189249038..189249043,-#_1486589e97b93de27e2aebb3842bf52ap@chr2:189249038..189249043, -
4.08e-74FFCP PHASE2:Hg19::chr2:189249038..189249043,-#_1486589e97b93de27e2aebb3842bf52ap@chr2:189249038..189249043, -
4.26e-74FFCP PHASE1:Hg19::chr16:19191426..19191435,+#_506a007ac7e2fb6a65fcc54ba66a39adp@chr16:19191426..19191435, +
4.26e-74FFCP PHASE2:Hg19::chr16:19191426..19191435,+#_506a007ac7e2fb6a65fcc54ba66a39adp@chr16:19191426..19191435, +
6.76e-74FFCP PHASE1:Hg19::chr3:115324099..115324113,+#_cb9302b8fc60204a0bdce3488fcfb933p@chr3:115324099..115324113, +
6.76e-74FFCP PHASE2:Hg19::chr3:115324099..115324113,+#_cb9302b8fc60204a0bdce3488fcfb933p@chr3:115324099..115324113, +
1.44e-73FFCP PHASE2:Hg19::chr20:60174794..60174806,+#_30df176ca91a104ef76523d25ccbb4b5p4@CDH4
1.44e-73FFCP PHASE1:Hg19::chr20:60174794..60174806,+#_30df176ca91a104ef76523d25ccbb4b5p4@CDH4
6.58e-70FFCP PHASE2:Hg19::chr2:76412139..76412163,+#_cd1763951af92fcbc32428a5b1f26f09p@chr2:76412139..76412163, +
6.58e-70FFCP PHASE1:Hg19::chr2:76412139..76412163,+#_cd1763951af92fcbc32428a5b1f26f09p@chr2:76412139..76412163, +
7.41e-70FFCP PHASE2:Hg19::chr3:178254022..178254025,+#_3022be13bb319d860cee46a330b734bdp4@KCNMB2
7.41e-70FFCP PHASE1:Hg19::chr3:178254022..178254025,+#_3022be13bb319d860cee46a330b734bdp4@KCNMB2
2.43e-69FFCP PHASE1:Hg19::chr14:87928470..87928490,-#_da5a3ed7a34a8f8d977b9929d15da735p@chr14:87928470..87928490, -
2.43e-69FFCP PHASE2:Hg19::chr14:87928470..87928490,-#_da5a3ed7a34a8f8d977b9929d15da735p@chr14:87928470..87928490, -
2.72e-69FFCP PHASE2:Hg19::chr1:162458051..162458067,-#_79e936232226747604346b0153786830p@chr1:162458051..162458067, -
2.72e-69FFCP PHASE1:Hg19::chr1:162458051..162458067,-#_79e936232226747604346b0153786830p@chr1:162458051..162458067, -
3.47e-69FFCP PHASE2:Hg19::chr20:62738879..62738896,-#_ac6116cfc3b6cac7b4860f325b692f72p2@NPBWR2
3.47e-69FFCP PHASE1:Hg19::chr20:62738879..62738896,-#_ac6116cfc3b6cac7b4860f325b692f72p2@NPBWR2
7.04e-69FFCP PHASE1:Hg19::chr13:47471045..47471055,-#_ba59866f5c613ee593a77de1eb8c720ep10@HTR2A
7.04e-69FFCP PHASE2:Hg19::chr13:47471045..47471055,-#_ba59866f5c613ee593a77de1eb8c720ep10@HTR2A
7.27e-69FFCP PHASE1:Hg19::chr2:220812508..220812521,+#_460e0bc8f78f748ef1ad2ebecf6e2b7cp@chr2:220812508..220812521, +
7.27e-69FFCP PHASE2:Hg19::chr2:220812508..220812521,+#_460e0bc8f78f748ef1ad2ebecf6e2b7cp@chr2:220812508..220812521, +
1.68e-68FFCP PHASE1:Hg19::chr12:91069081..91069092,+#_69aa6874fbb7d606ee2b4e9ffac4dc7fp@chr12:91069081..91069092, +
1.68e-68FFCP PHASE1:Hg19::chr14:71679425..71679447,+#_69aa6874fbb7d606ee2b4e9ffac4dc7fp1@ENST00000553621
1.68e-68FFCP PHASE2:Hg19::chr14:71679425..71679447,+#_69aa6874fbb7d606ee2b4e9ffac4dc7fp1@ENST00000553621
1.68e-68FFCP PHASE2:Hg19::chr12:91069081..91069092,+#_69aa6874fbb7d606ee2b4e9ffac4dc7fp@chr12:91069081..91069092, +
5.14e-68FFCP PHASE2:Hg19::chr10:68687632..68687644,+#_29937f9fa87cf047d20fb89edfdf9749p3@LRRTM3
5.14e-68FFCP PHASE1:Hg19::chr10:68687632..68687644,+#_29937f9fa87cf047d20fb89edfdf9749p3@LRRTM3
8.37e-67FFCP PHASE2:Hg19::chr19:10506527..10506555,-#_6d28baf874f8daa110b0dea43e158ec6p5@CDC37
8.37e-67FFCP PHASE1:Hg19::chr19:10506527..10506555,-#_6d28baf874f8daa110b0dea43e158ec6p5@CDC37
1.84e-66FFCP PHASE1:Hg19::chr6:131277510..131277530,-#_a5bc6510cfb21b8f9958ffe809067f2dp22@EPB41L2
1.84e-66FFCP PHASE2:Hg19::chr6:131277510..131277530,-#_a5bc6510cfb21b8f9958ffe809067f2dp22@EPB41L2
2.83e-66FFCP PHASE1:Hg19::chr6:73906231..73906237,+#_6aa227d1d38a089cf14f77a975b1fbfep@chr6:73906231..73906237, +
2.83e-66FFCP PHASE1:Hg19::chr11:132901592..132901601,-#_6aa227d1d38a089cf14f77a975b1fbfep@chr11:132901592..132901601, -
2.83e-66FFCP PHASE2:Hg19::chr11:132901592..132901601,-#_6aa227d1d38a089cf14f77a975b1fbfep@chr11:132901592..132901601, -
2.83e-66FFCP PHASE2:Hg19::chr8:27606125..27606134,-#_6aa227d1d38a089cf14f77a975b1fbfep6@CCDC25
2.83e-66FFCP PHASE2:Hg19::chr6:73906231..73906237,+#_6aa227d1d38a089cf14f77a975b1fbfep@chr6:73906231..73906237, +
2.83e-66FFCP PHASE1:Hg19::chr8:27606125..27606134,-#_6aa227d1d38a089cf14f77a975b1fbfep6@CCDC25
2.89e-66FFCP PHASE1:Hg19::chr17:9550376..9550379,-#_5753883e13a19fde639a224ca12646c5p@chr17:9550376..9550379, -
2.89e-66FFCP PHASE2:Hg19::chr17:9550376..9550379,-#_5753883e13a19fde639a224ca12646c5p@chr17:9550376..9550379, -
3.24e-66FFCP PHASE1:Hg19::chr5:17404147..17404159,+#_b1096f393a645deb52976e071dbca16cp2@ENST00000508677
3.24e-66FFCP PHASE2:Hg19::chr5:17404147..17404159,+#_b1096f393a645deb52976e071dbca16cp2@ENST00000508677
5.08e-66FFCP PHASE2:Hg19::chr10:64136084..64136105,+#_c2b0b9798a9e56a825e239555ce8b4aep7@ZNF365
5.08e-66FFCP PHASE1:Hg19::chr10:64136084..64136105,+#_c2b0b9798a9e56a825e239555ce8b4aep7@ZNF365
5.13e-66FFCP PHASE2:Hg19::chr11:133197324..133197336,-#_21c1f97b9fb37b9ac94a774df29b0991p@chr11:133197324..133197336, -
5.13e-66FFCP PHASE1:Hg19::chr6:112803862..112803893,+#_21c1f97b9fb37b9ac94a774df29b0991p@chr6:112803862..112803893, +
5.13e-66FFCP PHASE1:Hg19::chr11:133197324..133197336,-#_21c1f97b9fb37b9ac94a774df29b0991p@chr11:133197324..133197336, -
5.13e-66FFCP PHASE2:Hg19::chr6:112803862..112803893,+#_21c1f97b9fb37b9ac94a774df29b0991p@chr6:112803862..112803893, +
7.11e-66FFCP PHASE2:Hg19::chr3:155394152..155394163,-#_23647ede80d92ef52e4d3b94329258a1p4@PLCH1
7.11e-66FFCP PHASE1:Hg19::chr3:155394152..155394163,-#_23647ede80d92ef52e4d3b94329258a1p4@PLCH1
7.17e-66FFCP PHASE1:Hg19::chr2:76412175..76412186,+#_887f3bfc2b3549d1394c2b11c08dd07ep@chr2:76412175..76412186, +
7.17e-66FFCP PHASE2:Hg19::chr2:76412175..76412186,+#_887f3bfc2b3549d1394c2b11c08dd07ep@chr2:76412175..76412186, +
1.25e-65FFCP PHASE2:Hg19::chr1:36024414..36024431,+#_77752c6d47a0ec52ba31c98bd7753884p3@AB383919
1.25e-65FFCP PHASE1:Hg19::chr1:36024414..36024431,+#_77752c6d47a0ec52ba31c98bd7753884p3@AB383919
2.44e-65FFCP PHASE1:Hg19::chr16:31001949..31001964,-#_6a3fefe4776e0c462768d6fbb94cd737p1@AL713744
2.44e-65FFCP PHASE2:Hg19::chr16:31001949..31001964,-#_6a3fefe4776e0c462768d6fbb94cd737p1@AL713744
7.87e-64FFCP PHASE2:Hg19::chr8:27606152..27606165,-#_8c395795acb07e15f442f65f649a20a6p3@CCDC25
7.87e-64FFCP PHASE1:Hg19::chr8:27606152..27606165,-#_8c395795acb07e15f442f65f649a20a6p3@CCDC25
1.02e-63FFCP PHASE2:Hg19::chr7:45113897..45113916,+#_733dfa5d25af86c38991add8594e9230p@chr7:45113897..45113916, +
1.02e-63FFCP PHASE1:Hg19::chr7:45113897..45113916,+#_733dfa5d25af86c38991add8594e9230p@chr7:45113897..45113916, +
1.71e-63FFCP PHASE1:Hg19::chr8:35828134..35828145,+#_caad34cc10e7ade7174a869417e0170dp@chr8:35828134..35828145, +
1.71e-63FFCP PHASE2:Hg19::chr8:35828134..35828145,+#_caad34cc10e7ade7174a869417e0170dp@chr8:35828134..35828145, +
2.22e-63FFCP PHASE2:Hg19::chr4:118292684..118292695,+#_cfe37098fa32cbe8a10c8539d8399067p@chr4:118292684..118292695, +
2.22e-63FFCP PHASE1:Hg19::chr4:118292684..118292695,+#_cfe37098fa32cbe8a10c8539d8399067p@chr4:118292684..118292695, +
3.08e-63FFCP PHASE2:Hg19::chr2:115200003..115200031,+#_9ed05c3243985f5612f4f511790da6c7p8@DPP10
3.08e-63FFCP PHASE1:Hg19::chr2:115200003..115200031,+#_9ed05c3243985f5612f4f511790da6c7p8@DPP10
3.43e-63FFCP PHASE1:Hg19::chr4:176882799..176882812,-#_1502cc95e9f835c9a88eb8dd3c31cb74p@chr4:176882799..176882812, -
3.43e-63FFCP PHASE2:Hg19::chr4:176882799..176882812,-#_1502cc95e9f835c9a88eb8dd3c31cb74p@chr4:176882799..176882812, -
1.11e-62FFCP PHASE1:Hg19::chr2:17836640..17836651,+#_bbbd6ed8ac5ba5eb36f2bc352f423152p@chr2:17836640..17836651, +
1.11e-62FFCP PHASE2:Hg19::chr2:17836640..17836651,+#_bbbd6ed8ac5ba5eb36f2bc352f423152p@chr2:17836640..17836651, +
1.11e-62FFCP PHASE2:Hg19::chr6:95445637..95445675,-#_bbbd6ed8ac5ba5eb36f2bc352f423152p@chr6:95445637..95445675, -
1.11e-62FFCP PHASE1:Hg19::chr6:95445637..95445675,-#_bbbd6ed8ac5ba5eb36f2bc352f423152p@chr6:95445637..95445675, -
1.37e-62FFCP PHASE2:Hg19::chr20:24043888..24043912,+#_89c977fd0169b3df1b32de7f130e516cp@chr20:24043888..24043912, +
1.37e-62FFCP PHASE1:Hg19::chr20:24043888..24043912,+#_89c977fd0169b3df1b32de7f130e516cp@chr20:24043888..24043912, +

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