CL:0000117

Name:	CNS neuron (sensu Vertebrata)
Namespace:	FANTOM

Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

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Parents

is_a:	CL:2000029(central nervous system neuron)
develops_from:	CL:0000337(neuroblast (sensu Vertebrata))
part_of:	UBERON:0001017(central nervous system)

Children

is a:	CL:0000120 (granule cell),FF:0000121 (central nervous system neuron),CL:0002610 (raphe nuclei neuron),CL:0002611 (neuron of the dorsal spinal cord),CL:0002612 (neuron of the ventral spinal cord),CL:0002614 (neuron of the substantia nigra),CL:0012001 (neuron of the forebrain)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

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Human (Homo sapiens)

• 11489-119E4 (Mouse Neurons - substantia nigra, donor4)
• 11490-119E5 (Mouse Neurons - substantia nigra, donor5)
• 11495-119F1
• 11575-120E9
• 11636-122C7 (Mouse Granule cells, donor3)
• 11642-122D4
• 11643-122D5 (Mouse Neurons - dorsal spinal cord, donor3)
• 11644-122D6 (Mouse Neurons - hippocampal, donor3)
• 11645-122D7 (Mouse Neurons - raphe, donor3)
• 11646-122D8 (Mouse Neurons - striatal, donor3)

... further results Mouse (Mus musculus)

• 11489-119E4 (Mouse Neurons - substantia nigra, donor4)
• 11490-119E5 (Mouse Neurons - substantia nigra, donor5)
• 11495-119F1
• 11575-120E9
• 11636-122C7 (Mouse Granule cells, donor3)
• 11642-122D4
• 11643-122D5 (Mouse Neurons - dorsal spinal cord, donor3)
• 11644-122D6 (Mouse Neurons - hippocampal, donor3)
• 11645-122D7 (Mouse Neurons - raphe, donor3)
• 11646-122D8 (Mouse Neurons - striatal, donor3)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000117 (CNS neuron (sensu Vertebrata)), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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Search:

P-value	FFCP	Short description

P-value	FFCP	Short description
3.71e-70	FFCP PHASE1:Mm9::chr8:125944624..125944663,+	p@chr8:125944624..125944663, +
3.71e-70	FFCP PHASE2:Mm9::chr8:125944624..125944663,+	p@chr8:125944624..125944663, +
1.29e-63	FFCP PHASE2:Mm9::chr9:75414533..75414538,-	p@chr9:75414533..75414538, -
1.29e-63	FFCP PHASE1:Mm9::chr9:75414533..75414538,-	p@chr9:75414533..75414538, -
3.89e-63	FFCP PHASE2:Mm9::chr5:38550223..38550234,-	p@chr5:38550223..38550234, -
3.89e-63	FFCP PHASE1:Mm9::chr5:38550223..38550234,-	p@chr5:38550223..38550234, -
4.3e-62	FFCP PHASE1:Mm9::chr8:125944694..125944740,+	p@chr8:125944694..125944740, +
4.3e-62	FFCP PHASE2:Mm9::chr8:125944694..125944740,+	p@chr8:125944694..125944740, +
3.77e-60	FFCP PHASE2:Mm9::chr12:28025392..28025407,-	p@chr12:28025392..28025407, -
3.77e-60	FFCP PHASE1:Mm9::chr12:28025392..28025407,-	p@chr12:28025392..28025407, -
1.58e-59	FFCP PHASE1:Mm9::chr9:49312416..49312430,-	p@chr9:49312416..49312430, -
1.58e-59	FFCP PHASE2:Mm9::chr9:49312416..49312430,-	p@chr9:49312416..49312430, -
7.76e-59	FFCP PHASE1:Mm9::chr11:104189552..104189556,-	p@chr11:104189552..104189556, -
7.76e-59	FFCP PHASE2:Mm9::chr11:104189552..104189556,-	p@chr11:104189552..104189556, -
2.27e-58	FFCP PHASE2:Mm9::chr1:38851929..38851932,-	p@chr1:38851929..38851932, -
2.27e-58	FFCP PHASE1:Mm9::chr1:38851929..38851932,-	p@chr1:38851929..38851932, -
4.76e-56	FFCP PHASE1:Mm9::chr8:125944529..125944543,+	p@chr8:125944529..125944543, +
4.76e-56	FFCP PHASE2:Mm9::chr8:125944529..125944543,+	p@chr8:125944529..125944543, +
1.06e-55	FFCP PHASE1:Mm9::chr19:47098414..47098424,+	p@chr19:47098414..47098424, +
1.06e-55	FFCP PHASE2:Mm9::chr19:47098414..47098424,+	p@chr19:47098414..47098424, +
2.68e-55	FFCP PHASE1:Mm9::chr17:6106475..6106488,-	p@chr17:6106475..6106488, -
2.68e-55	FFCP PHASE2:Mm9::chr17:6106475..6106488,-	p@chr17:6106475..6106488, -
5.8e-55	FFCP PHASE2:Mm9::chr3:8545615..8545628,+	p@chr3:8545615..8545628, +
5.8e-55	FFCP PHASE1:Mm9::chr3:8545615..8545628,+	p@chr3:8545615..8545628, +
1.61e-54	FFCP PHASE2:Mm9::chr4:43455274..43455283,+	p12@Tesk1
1.61e-54	FFCP PHASE1:Mm9::chr4:43455274..43455283,+	p12@Tesk1
2.57e-54	FFCP PHASE2:Mm9::chr14:26427427..26427439,+	p22@Zmiz1
2.57e-54	FFCP PHASE1:Mm9::chr14:26427427..26427439,+	p22@Zmiz1
3.64e-54	FFCP PHASE1:Mm9::chr8:111061744..111061761,-	p@chr8:111061744..111061761, -
3.64e-54	FFCP PHASE2:Mm9::chr8:111061744..111061761,-	p@chr8:111061744..111061761, -
5.16e-54	FFCP PHASE2:Mm9::chr11:104182657..104182673,+	p@chr11:104182657..104182673, +
5.16e-54	FFCP PHASE1:Mm9::chr11:104182657..104182673,+	p@chr11:104182657..104182673, +
6.04e-54	FFCP PHASE2:Mm9::chr11:104163705..104163726,-	p@chr11:104163705..104163726, -
6.04e-54	FFCP PHASE1:Mm9::chr11:104163705..104163726,-	p@chr11:104163705..104163726, -
3.91e-53	FFCP PHASE2:Mm9::chr8:125942045..125942056,+	p@chr8:125942045..125942056, +
3.91e-53	FFCP PHASE1:Mm9::chr8:125942045..125942056,+	p@chr8:125942045..125942056, +
3.97e-53	FFCP PHASE2:Mm9::chr9:21823118..21823129,-	p@chr9:21823118..21823129, -
3.97e-53	FFCP PHASE1:Mm9::chr9:21823118..21823129,-	p@chr9:21823118..21823129, -
5.06e-53	FFCP PHASE1:Mm9::chr7:89319756..89319761,+	p4@Sh3gl3
5.06e-53	FFCP PHASE2:Mm9::chr7:89319756..89319761,+	p4@Sh3gl3
6.62e-53	FFCP PHASE2:Mm9::chr15:82123103..82123106,+	p@chr15:82123103..82123106, +
6.62e-53	FFCP PHASE1:Mm9::chr15:82123103..82123106,+	p@chr15:82123103..82123106, +
7.51e-53	FFCP PHASE1:Mm9::chr10:127896295..127896304,+	p6@Smarcc2
7.51e-53	FFCP PHASE2:Mm9::chr10:127896295..127896304,+	p6@Smarcc2
8.0e-53	FFCP PHASE2:Mm9::chr14:55593026..55593064,-	p@chr14:55593026..55593064, -
8.0e-53	FFCP PHASE1:Mm9::chr14:55593026..55593064,-	p@chr14:55593026..55593064, -
1.15e-52	FFCP PHASE1:Mm9::chr14:62912065..62912077,-	p3@Dleu7
1.15e-52	FFCP PHASE2:Mm9::chr14:62912065..62912077,-	p3@Dleu7
1.16e-52	FFCP PHASE1:Mm9::chr13:98015930..98015942,+	p@chr13:98015930..98015942, +
1.16e-52	FFCP PHASE2:Mm9::chr13:98015930..98015942,+	p@chr13:98015930..98015942, +
3.34e-52	FFCP PHASE2:Mm9::chr15:101676842..101676853,-	p@chr15:101676842..101676853, -
3.34e-52	FFCP PHASE1:Mm9::chr15:101676842..101676853,-	p@chr15:101676842..101676853, -
7.69e-52	FFCP PHASE2:Mm9::chr4:130168084..130168097,+	p@chr4:130168084..130168097, +
7.69e-52	FFCP PHASE1:Mm9::chr4:130168084..130168097,+	p@chr4:130168084..130168097, +
7.85e-52	FFCP PHASE2:Mm9::chr8:125941995..125942014,+	p@chr8:125941995..125942014, +
7.85e-52	FFCP PHASE1:Mm9::chr8:125941995..125942014,+	p@chr8:125941995..125942014, +
1.06e-51	FFCP PHASE2:Mm9::chr12:11889272..11889293,+	p@chr12:11889272..11889293, +
1.06e-51	FFCP PHASE1:Mm9::chr12:11889272..11889293,+	p@chr12:11889272..11889293, +
2.38e-51	FFCP PHASE2:Mm9::chr7:17200127..17200137,-	p11@Grlf1
2.38e-51	FFCP PHASE1:Mm9::chr7:17200127..17200137,-	p11@Grlf1
2.67e-51	FFCP PHASE2:Mm9::chr16:73045578..73045594,+	p@chr16:73045578..73045594, +
2.67e-51	FFCP PHASE1:Mm9::chr16:73045578..73045594,+	p@chr16:73045578..73045594, +
2.03e-50	FFCP PHASE2:Mm9::chr7:126328112..126328133,-	p3@Gpr139
2.03e-50	FFCP PHASE1:Mm9::chr7:126328112..126328133,-	p3@Gpr139
1.43e-49	FFCP PHASE1:Mm9::chr10:127058298..127058314,-	p6@Lrp1
1.43e-49	FFCP PHASE2:Mm9::chr10:127058298..127058314,-	p6@Lrp1
1.69e-49	FFCP PHASE1:Mm9::chr5:37677669..37677680,+	p@chr5:37677669..37677680, +
1.69e-49	FFCP PHASE2:Mm9::chr5:37677669..37677680,+	p@chr5:37677669..37677680, +
1.77e-49	FFCP PHASE1:Mm9::chr5:37839684..37839691,-	p@chr5:37839684..37839691, -
1.77e-49	FFCP PHASE2:Mm9::chr5:37839684..37839691,-	p@chr5:37839684..37839691, -
2.13e-49	FFCP PHASE2:Mm9::chr4:69586931..69586957,-	p2@ENSMUST00000120560
2.13e-49	FFCP PHASE1:Mm9::chr4:69586931..69586957,-	p2@ENSMUST00000120560
2.32e-49	FFCP PHASE2:Mm9::chr14:40284476..40284479,-	p@chr14:40284476..40284479, -
2.32e-49	FFCP PHASE1:Mm9::chr14:40284476..40284479,-	p@chr14:40284476..40284479, -
4.74e-49	FFCP PHASE1:Mm9::chr14:76956449..76956460,-	p4@Serp2
4.74e-49	FFCP PHASE2:Mm9::chr14:76956449..76956460,-	p4@Serp2
6.8e-49	FFCP PHASE2:Mm9::chr18:86880274..86880286,+	p4@Cbln2
6.8e-49	FFCP PHASE1:Mm9::chr18:86880274..86880286,+	p4@Cbln2
7.23e-49	FFCP PHASE1:Mm9::chr19:47098035..47098046,+	p@chr19:47098035..47098046, +
7.23e-49	FFCP PHASE2:Mm9::chr19:47098035..47098046,+	p@chr19:47098035..47098046, +
8.09e-49	FFCP PHASE1:Mm9::chr5:24104722..24104736,-	p9@Smarcd3
8.09e-49	FFCP PHASE2:Mm9::chr5:24104722..24104736,-	p9@Smarcd3
8.78e-49	FFCP PHASE1:Mm9::chr18:36172971..36172981,+	p@chr18:36172971..36172981, +
8.78e-49	FFCP PHASE2:Mm9::chr18:36172971..36172981,+	p@chr18:36172971..36172981, +
1.04e-48	FFCP PHASE2:Mm9::chr13:54676369..54676378,+	p2@Arl10
1.04e-48	FFCP PHASE1:Mm9::chr13:54676369..54676378,+	p2@Arl10
1.31e-48	FFCP PHASE1:Mm9::chr11:70846402..70846415,-	p@chr11:70846402..70846415, -
1.31e-48	FFCP PHASE2:Mm9::chr11:70846402..70846415,-	p@chr11:70846402..70846415, -
4.96e-48	FFCP PHASE2:Mm9::chr10:80693503..80693514,-	p2@Atcay
4.96e-48	FFCP PHASE1:Mm9::chr10:80693503..80693514,-	p2@Atcay
6.4e-48	FFCP PHASE1:Mm9::chr14:20694506..20694548,-	p@chr14:20694506..20694548, -
6.4e-48	FFCP PHASE2:Mm9::chr14:20694506..20694548,-	p@chr14:20694506..20694548, -
1.0e-47	FFCP PHASE1:Mm9::chr7:58879965..58879978,+	p@chr7:58879965..58879978, +
1.0e-47	FFCP PHASE2:Mm9::chr7:58879965..58879978,+	p@chr7:58879965..58879978, +
1.11e-47	FFCP PHASE1:Mm9::chr9:121846403..121846415,+	p2@1700048O20Rik
1.11e-47	FFCP PHASE2:Mm9::chr9:121846403..121846415,+	p2@1700048O20Rik
1.4e-47	FFCP PHASE2:Mm9::chr15:74394100..74394126,+	p5@Bai1
1.4e-47	FFCP PHASE1:Mm9::chr15:74394100..74394126,+	p5@Bai1
1.65e-47	FFCP PHASE1:Mm9::chr1:84692822..84692836,-	p10@Dner
1.65e-47	FFCP PHASE2:Mm9::chr1:84692822..84692836,-	p10@Dner

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