CL:0002580

Name:	preadipocyte of the breast
Namespace:	FANTOM
Definition:	"A preadipocyte that is part of the breast." [GOC:tfm]
Created by:	tmeehan
Creation date:	2011-03-03T04:19:46Z

Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

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Parents

is_a:	CL:0002334(preadipocyte)
part_of:	UBERON:0000310(breast)

Children

derives from:	FF:0000139 (human preadipocyte of the breast sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

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Human (Homo sapiens)

• 11328-117E5 (Preadipocyte - breast, donor2)
• 11467-119B9 (Preadipocyte - breast, donor1)
• 14318-155D7
• 14319-155D8 (Preadipocyte - breast donor2 (cytoplasmic fraction))
• 14320-155D9 (Preadipocyte - breast, donor2 (nuclear fraction))
• 14336-155F7
• 14337-155F8
• 14338-155F9

Mouse (Mus musculus)

• 11328-117E5 (Preadipocyte - breast, donor2)
• 11467-119B9 (Preadipocyte - breast, donor1)
• 14318-155D7
• 14319-155D8 (Preadipocyte - breast donor2 (cytoplasmic fraction))
• 14320-155D9 (Preadipocyte - breast, donor2 (nuclear fraction))
• 14336-155F7
• 14337-155F8
• 14338-155F9

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002580 (preadipocyte of the breast), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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P-value	FFCP	Short description

P-value	FFCP	Short description
6.24e-88	FFCP PHASE2:Hg19::chr6:75474615..75474618,+	p@chr6:75474615..75474618, +
6.24e-88	FFCP PHASE1:Hg19::chr6:75474615..75474618,+	p@chr6:75474615..75474618, +
5.41e-85	FFCP PHASE2:Hg19::chr1:240577171..240577181,-	p@chr1:240577171..240577181, -
5.41e-85	FFCP PHASE1:Hg19::chr1:240577171..240577181,-	p@chr1:240577171..240577181, -
1.01e-74	FFCP PHASE1:Hg19::chr7:134430175..134430178,+	p85@CALD1
1.01e-74	FFCP PHASE2:Hg19::chr7:134430175..134430178,+	p85@CALD1
1.54e-66	FFCP PHASE1:Hg19::chr4:112437339..112437350,+	p@chr4:112437339..112437350, +
1.54e-66	FFCP PHASE2:Hg19::chr4:112437339..112437350,+	p@chr4:112437339..112437350, +
2.39e-66	FFCP PHASE2:Hg19::chr7:150870947..150870948,+	p@chr7:150870947..150870948, +
2.39e-66	FFCP PHASE2:Hg19::chr6:75794482..75794491,-	p19@AL359627
2.39e-66	FFCP PHASE2:Hg19::chr1:3603926..3603929,+	p@chr1:3603926..3603929, +
2.39e-66	FFCP PHASE1:Hg19::chr7:150870947..150870948,+	p@chr7:150870947..150870948, +
2.39e-66	FFCP PHASE2:Hg19::chr5:35771474..35771476,+	p@chr5:35771474..35771476, +
2.39e-66	FFCP PHASE1:Hg19::chr6:75794482..75794491,-	p19@AL359627
2.39e-66	FFCP PHASE2:Hg19::chr2:13180474..13180475,-	p@chr2:13180474..13180475, -
2.39e-66	FFCP PHASE1:Hg19::chr1:3603926..3603929,+	p@chr1:3603926..3603929, +
2.39e-66	FFCP PHASE1:Hg19::chr2:13180474..13180475,-	p@chr2:13180474..13180475, -
2.39e-66	FFCP PHASE1:Hg19::chr5:35771474..35771476,+	p@chr5:35771474..35771476, +
2.39e-66	FFCP PHASE2:Hg19::chr22:44140357..44140361,+	p@chr22:44140357..44140361, +
2.39e-66	FFCP PHASE1:Hg19::chr22:44140357..44140361,+	p@chr22:44140357..44140361, +
3.01e-66	FFCP PHASE1:Hg19::chr15:39486361..39486371,-	p5@ENST00000560743
3.01e-66	FFCP PHASE2:Hg19::chr15:39486361..39486371,-	p5@ENST00000560743
3.35e-66	FFCP PHASE1:Hg19::chr6:75916067..75916078,-	p30@COL12A1
3.35e-66	FFCP PHASE2:Hg19::chr6:75916067..75916078,-	p30@COL12A1
4.68e-66	FFCP PHASE1:Hg19::chr15:39402510..39402513,-	p@chr15:39402510..39402513, -
4.68e-66	FFCP PHASE2:Hg19::chr15:39402510..39402513,-	p@chr15:39402510..39402513, -
4.46e-60	FFCP PHASE1:Hg19::chr19:18899082..18899091,+	p@chr19:18899082..18899091, +
4.46e-60	FFCP PHASE2:Hg19::chr19:18899082..18899091,+	p@chr19:18899082..18899091, +
6.68e-60	FFCP PHASE2:Hg19::chr1:103471622..103471650,+	p@chr1:103471622..103471650, +
6.68e-60	FFCP PHASE1:Hg19::chr1:103471622..103471650,+	p@chr1:103471622..103471650, +
1.22e-59	FFCP PHASE1:Hg19::chr1:240448546..240448559,+	p@chr1:240448546..240448559, +
1.22e-59	FFCP PHASE2:Hg19::chr1:240448546..240448559,+	p@chr1:240448546..240448559, +
6.02e-55	FFCP PHASE2:Hg19::chr4:112437251..112437278,+	p@chr4:112437251..112437278, +
6.02e-55	FFCP PHASE1:Hg19::chr4:112437251..112437278,+	p@chr4:112437251..112437278, +
2.87e-53	FFCP PHASE1:Hg19::chr11:66811898..66811900,-	p@chr11:66811898..66811900, -
2.87e-53	FFCP PHASE2:Hg19::chr11:66811898..66811900,-	p@chr11:66811898..66811900, -
6.39e-53	FFCP PHASE2:Hg19::chr7:73462921..73462932,+	p@chr7:73462921..73462932, +
6.39e-53	FFCP PHASE1:Hg19::chr7:73462921..73462932,+	p@chr7:73462921..73462932, +
2.64e-50	FFCP PHASE1:Hg19::chr15:81242191..81242201,+	p19@KIAA1199
2.64e-50	FFCP PHASE2:Hg19::chr15:81242191..81242201,+	p19@KIAA1199
2.25e-46	FFCP PHASE2:Hg19::chr7:73483140..73483149,+	p31@ELN
2.25e-46	FFCP PHASE1:Hg19::chr7:73483140..73483149,+	p31@ELN
4.87e-46	FFCP PHASE2:Hg19::chr19:18897380..18897392,+	p@chr19:18897380..18897392, +
4.87e-46	FFCP PHASE1:Hg19::chr19:18897380..18897392,+	p@chr19:18897380..18897392, +
7.81e-45	FFCP PHASE2:Hg19::chr6:159660765..159660776,+	p@chr6:159660765..159660776, +
7.81e-45	FFCP PHASE1:Hg19::chr6:159660765..159660776,+	p@chr6:159660765..159660776, +
1.91e-44	FFCP PHASE1:Hg19::chr7:22900150..22900172,+	p@chr7:22900150..22900172, +
1.91e-44	FFCP PHASE2:Hg19::chr7:22900150..22900172,+	p@chr7:22900150..22900172, +
3.41e-43	FFCP PHASE2:Hg19::chr15:68805210..68805226,+	p@chr15:68805210..68805226, +
3.41e-43	FFCP PHASE2:Hg19::chr2:191745264..191745275,+	p21@GLS
3.41e-43	FFCP PHASE1:Hg19::chr2:191745264..191745275,+	p21@GLS
3.41e-43	FFCP PHASE1:Hg19::chr15:68805210..68805226,+	p@chr15:68805210..68805226, +
1.96e-40	FFCP PHASE2:Hg19::chr19:18895742..18895757,-	p@chr19:18895742..18895757, -
1.96e-40	FFCP PHASE1:Hg19::chr19:18895742..18895757,-	p@chr19:18895742..18895757, -
3.83e-40	FFCP PHASE1:Hg19::chr19:18900893..18900901,-	p@chr19:18900893..18900901, -
3.83e-40	FFCP PHASE2:Hg19::chr19:18900893..18900901,-	p@chr19:18900893..18900901, -
7.56e-39	FFCP PHASE2:Hg19::chr4:154926484..154926525,+	p@chr4:154926484..154926525, +
7.56e-39	FFCP PHASE1:Hg19::chr4:154926484..154926525,+	p@chr4:154926484..154926525, +
1.23e-38	FFCP PHASE2:Hg19::chr5:111312488..111312498,-	p35@C5orf13
1.23e-38	FFCP PHASE1:Hg19::chr5:111312488..111312498,-	p35@C5orf13
2.18e-38	FFCP PHASE1:Hg19::chr7:85399962..85399979,+	p@chr7:85399962..85399979, +
2.18e-38	FFCP PHASE1:Hg19::chr15:39534820..39534834,+	p@chr15:39534820..39534834, +
2.18e-38	FFCP PHASE2:Hg19::chr15:39534820..39534834,+	p@chr15:39534820..39534834, +
2.18e-38	FFCP PHASE2:Hg19::chr7:85399962..85399979,+	p@chr7:85399962..85399979, +
2.38e-38	FFCP PHASE1:Hg19::chr19:18899713..18899727,-	p@chr19:18899713..18899727, -
2.38e-38	FFCP PHASE2:Hg19::chr19:18899713..18899727,-	p@chr19:18899713..18899727, -
3.19e-38	FFCP PHASE2:Hg19::chr4:169552329..169552340,+	p34@PALLD
3.19e-38	FFCP PHASE1:Hg19::chr4:169552329..169552340,+	p34@PALLD
5.08e-38	FFCP PHASE1:Hg19::chr19:18897406..18897417,-	p6@COMP
5.08e-38	FFCP PHASE2:Hg19::chr19:18897406..18897417,-	p6@COMP
5.76e-38	FFCP PHASE1:Hg19::chr10:105428632..105428639,-	p26@SH3PXD2A
5.76e-38	FFCP PHASE2:Hg19::chr10:105428632..105428639,-	p26@SH3PXD2A
7.42e-38	FFCP PHASE2:Hg19::chr15:81214436..81214445,+	p13@KIAA1199
7.42e-38	FFCP PHASE1:Hg19::chr15:81214436..81214445,+	p13@KIAA1199
7.42e-38	FFCP PHASE2:Hg19::chr19:18899552..18899562,-	p@chr19:18899552..18899562, -
7.42e-38	FFCP PHASE1:Hg19::chr19:18899552..18899562,-	p@chr19:18899552..18899562, -
2.03e-37	FFCP PHASE2:Hg19::chr7:137532379..137532400,-	p@chr7:137532379..137532400, -
2.03e-37	FFCP PHASE1:Hg19::chr7:137532379..137532400,-	p@chr7:137532379..137532400, -
7.74e-36	FFCP PHASE1:Hg19::chr19:18893583..18893586,+	p@chr19:18893583..18893586, +
7.74e-36	FFCP PHASE2:Hg19::chr19:18893583..18893586,+	p@chr19:18893583..18893586, +
1.11e-35	FFCP PHASE1:Hg19::chr12:8814756..8814767,-	p19@MFAP5
1.11e-35	FFCP PHASE1:Hg19::chr13:102104738..102104747,+	p11@ITGBL1
1.11e-35	FFCP PHASE2:Hg19::chr12:8814756..8814767,-	p19@MFAP5
1.11e-35	FFCP PHASE2:Hg19::chr13:102104738..102104747,+	p11@ITGBL1
1.4e-35	FFCP PHASE2:Hg19::chr6:35216360..35216374,+	p10@SCUBE3
1.4e-35	FFCP PHASE1:Hg19::chr6:35216360..35216374,+	p10@SCUBE3
2.53e-35	FFCP PHASE2:Hg19::chr15:68631946..68631967,-	p@chr15:68631946..68631967, -
2.53e-35	FFCP PHASE1:Hg19::chr15:68631946..68631967,-	p@chr15:68631946..68631967, -
3.33e-34	FFCP PHASE1:Hg19::chr15:39486488..39486494,-	p6@ENST00000560743
3.33e-34	FFCP PHASE2:Hg19::chr15:39486488..39486494,-	p6@ENST00000560743
5.96e-34	FFCP PHASE2:Hg19::chr16:4181309..4181310,-	p@chr16:4181309..4181310, -
5.96e-34	FFCP PHASE1:Hg19::chr16:4181309..4181310,-	p@chr16:4181309..4181310, -
5.96e-34	FFCP PHASE2:Hg19::chr4:154711058..154711075,+	p@chr4:154711058..154711075, +
5.96e-34	FFCP PHASE1:Hg19::chr4:154711058..154711075,+	p@chr4:154711058..154711075, +
9.1e-34	FFCP PHASE2:Hg19::chr9:38437716..38437729,+	p@chr9:38437716..38437729, +
9.1e-34	FFCP PHASE1:Hg19::chr9:38437716..38437729,+	p@chr9:38437716..38437729, +
1.48e-33	FFCP PHASE2:Hg19::chr6:101841257..101841271,+	p3@HM149340
1.48e-33	FFCP PHASE1:Hg19::chr6:101841257..101841271,+	p3@HM149340
1.65e-33	FFCP PHASE2:Hg19::chr7:40251315..40251325,-	p@chr7:40251315..40251325, -
1.65e-33	FFCP PHASE1:Hg19::chr7:40251315..40251325,-	p@chr7:40251315..40251325, -

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