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DOID:3905

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Name:lung carcinoma
Namespace:FANTOM
Definition:"A lung cancer that is located_in the lungs and has_symptom cough and has_symptom chest discomfort or pain and has_symptom weight loss and has_symptom hemoptysis." [url:https://merck.com/mmpe/sec05/ch062/ch062b.html]
Xrefs:
links:

NCI:C4878
OMIM:211980
SNOMEDCT_2010_1_31:154485001
SNOMEDCT_2010_1_31:187875007
SNOMEDCT_2010_1_31:269561006

UMLS_CUI:C0684249
Synonyms: "cancer of lung" EXACT [NCI2004_11_17:C4878]
"carcinoma OF LUNG" EXACT [MTH:460]
"carcinoma of lung" RELATED []
"lung carcinoma" EXACT [SNOMEDCT_2005_07_31:269561006]
"lung carcinoma" EXACT [SNOMEDCT_2005_07_31:154485001]
Comments:OMIM mapping confirmed by DO. [SN].

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:1324(lung cancer)



Children


is a:DOID:3908 (non-small cell lung carcinoma),DOID:5409 (lung small cell carcinoma)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3905 (lung carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
9.75e-45FFCP PHASE1:Hg19::chr6:45399294..45399301,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399294..45399301, +
9.75e-45FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:125378873..125378876, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399294..45399301,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399294..45399301, +
9.75e-45FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:125378873..125378876, +
9.75e-45FFCP PHASE1:Hg19::chr6:45405332..45405343,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405332..45405343, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399245..45399258,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399245..45399258, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399533..45399540,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399533..45399540, +
9.75e-45FFCP PHASE1:Hg19::chr6:45405393..45405412,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405393..45405412, +
9.75e-45FFCP PHASE1:Hg19::chr6:45399263..45399274,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399263..45399274, +
9.75e-45FFCP PHASE2:Hg19::chr6:45405332..45405343,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405332..45405343, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399245..45399258,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399245..45399258, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399533..45399540,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399533..45399540, +
9.75e-45FFCP PHASE2:Hg19::chr6:45405393..45405412,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45405393..45405412, +
9.75e-45FFCP PHASE2:Hg19::chr6:45399263..45399274,+#_d8941396dd1289c6047716a76ac60ff3p@chr6:45399263..45399274, +
4.35e-40FFCP PHASE1:Hg19::chr6:73785930..73785949,-#_63c78ab1a3b8986f5f523383f41275dcp@chr6:73785930..73785949, -
4.35e-40FFCP PHASE2:Hg19::chr6:73785930..73785949,-#_63c78ab1a3b8986f5f523383f41275dcp@chr6:73785930..73785949, -
2.66e-30FFCP PHASE1:Hg19::chr6:45399724..45399733,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399724..45399733, +
2.66e-30FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_731a82d29cb8eb0e261f77134811de1ep@chr8:40525350..40525354, -
2.66e-30FFCP PHASE1:Hg19::chr6:45399422..45399430,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399422..45399430, +
2.66e-30FFCP PHASE1:Hg19::chr6:73786593..73786601,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786593..73786601, +
2.66e-30FFCP PHASE2:Hg19::chr6:45399724..45399733,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399724..45399733, +
2.66e-30FFCP PHASE1:Hg19::chr5:92526866..92526914,-#_731a82d29cb8eb0e261f77134811de1ep@chr5:92526866..92526914, -
2.66e-30FFCP PHASE2:Hg19::chr6:45399422..45399430,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:45399422..45399430, +
2.66e-30FFCP PHASE1:Hg19::chr6:73786620..73786627,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786620..73786627, +
2.66e-30FFCP PHASE2:Hg19::chr6:73786593..73786601,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786593..73786601, +
2.66e-30FFCP PHASE2:Hg19::chr13:70823810..70823813,+#_731a82d29cb8eb0e261f77134811de1ep@chr13:70823810..70823813, +
2.66e-30FFCP PHASE2:Hg19::chr5:92526866..92526914,-#_731a82d29cb8eb0e261f77134811de1ep@chr5:92526866..92526914, -
2.66e-30FFCP PHASE2:Hg19::chr6:73786620..73786627,+#_731a82d29cb8eb0e261f77134811de1ep@chr6:73786620..73786627, +
2.66e-30FFCP PHASE1:Hg19::chr13:70823810..70823813,+#_731a82d29cb8eb0e261f77134811de1ep@chr13:70823810..70823813, +
2.66e-30FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_731a82d29cb8eb0e261f77134811de1ep@chr8:40525350..40525354, -
3.09e-30FFCP PHASE1:Hg19::chr18:10085554..10085562,+#_6ab758267c516e266b3cc84006025e3ap@chr18:10085554..10085562, +
3.09e-30FFCP PHASE2:Hg19::chr18:10085554..10085562,+#_6ab758267c516e266b3cc84006025e3ap@chr18:10085554..10085562, +
3.59e-30FFCP PHASE1:Hg19::chr1:156779602..156779619,-#_b0a10e90ac2aa3a790fb9716f2bbd976p@chr1:156779602..156779619, -
3.59e-30FFCP PHASE2:Hg19::chr1:156779602..156779619,-#_b0a10e90ac2aa3a790fb9716f2bbd976p@chr1:156779602..156779619, -
7.5e-29FFCP PHASE1:Hg19::chr21:37377429..37377443,+#_d0518c616b4f4645db245080ba4c6f03p2@ENST00000457157
7.5e-29FFCP PHASE2:Hg19::chr21:37377429..37377443,+#_d0518c616b4f4645db245080ba4c6f03p2@ENST00000457157
8.14e-26FFCP PHASE1:Hg19::chr4:89282612..89282616,+#_d620c4dda050ed3d00bebc254948b1cep@chr4:89282612..89282616, +
8.14e-26FFCP PHASE2:Hg19::chr4:89282612..89282616,+#_d620c4dda050ed3d00bebc254948b1cep@chr4:89282612..89282616, +
3.17e-25FFCP PHASE1:Hg19::chr14:36982707..36982717,-#_dc0ca4292e777cec68d90532f4c7e584p8@SFTA3
3.17e-25FFCP PHASE2:Hg19::chr14:36982707..36982717,-#_dc0ca4292e777cec68d90532f4c7e584p8@SFTA3
2.62e-23FFCP PHASE1:Hg19::chr7:26590563..26590574,-#_ff13f51a990286586a726a44f2e602cap@chr7:26590563..26590574, -
2.62e-23FFCP PHASE1:Hg19::chr2:135170047..135170048,+#_ff13f51a990286586a726a44f2e602cap@chr2:135170047..135170048, +
2.62e-23FFCP PHASE1:Hg19::chr20:45418126..45418131,-#_ff13f51a990286586a726a44f2e602cap@chr20:45418126..45418131, -
2.62e-23FFCP PHASE2:Hg19::chrX:154251771..154251775,-#_ff13f51a990286586a726a44f2e602cap@chrX:154251771..154251775, -
2.62e-23FFCP PHASE2:Hg19::chr6:154710410..154710428,-#_ff13f51a990286586a726a44f2e602cap@chr6:154710410..154710428, -
2.62e-23FFCP PHASE2:Hg19::chr14:36536932..36536937,-#_ff13f51a990286586a726a44f2e602cap@chr14:36536932..36536937, -
2.62e-23FFCP PHASE1:Hg19::chrX:135761770..135761786,-#_ff13f51a990286586a726a44f2e602cap@chrX:135761770..135761786, -
2.62e-23FFCP PHASE1:Hg19::chr10:36850273..36850276,-#_ff13f51a990286586a726a44f2e602cap@chr10:36850273..36850276, -
2.62e-23FFCP PHASE1:Hg19::chr6:154858693..154858698,+#_ff13f51a990286586a726a44f2e602cap@chr6:154858693..154858698, +
2.62e-23FFCP PHASE1:Hg19::chr1:100110807..100110818,+#_ff13f51a990286586a726a44f2e602cap@chr1:100110807..100110818, +
2.62e-23FFCP PHASE2:Hg19::chr7:151169194..151169198,-#_ff13f51a990286586a726a44f2e602cap17@RHEB
2.62e-23FFCP PHASE2:Hg19::chr3:86703154..86703166,-#_ff13f51a990286586a726a44f2e602cap@chr3:86703154..86703166, -
2.62e-23FFCP PHASE2:Hg19::chr3:115898365..115898379,+#_ff13f51a990286586a726a44f2e602cap@chr3:115898365..115898379, +
2.62e-23FFCP PHASE2:Hg19::chr16:13010455..13010466,+#_ff13f51a990286586a726a44f2e602cap@chr16:13010455..13010466, +
2.62e-23FFCP PHASE2:Hg19::chr14:57127818..57127825,+#_ff13f51a990286586a726a44f2e602cap@chr14:57127818..57127825, +
2.62e-23FFCP PHASE2:Hg19::chr10:101691056..101691064,-#_ff13f51a990286586a726a44f2e602cap13@DNMBP
2.62e-23FFCP PHASE1:Hg19::chr12:46124855..46124858,+#_ff13f51a990286586a726a44f2e602cap@chr12:46124855..46124858, +
2.62e-23FFCP PHASE2:Hg19::chr13:76554315..76554319,+#_ff13f51a990286586a726a44f2e602cap@chr13:76554315..76554319, +
2.62e-23FFCP PHASE1:Hg19::chr9:226208..226216,-#_ff13f51a990286586a726a44f2e602cap@chr9:226208..226216, -
2.62e-23FFCP PHASE1:Hg19::chr8:82275651..82275662,+#_ff13f51a990286586a726a44f2e602cap@chr8:82275651..82275662, +
2.62e-23FFCP PHASE1:Hg19::chr2:234862417..234862434,+#_ff13f51a990286586a726a44f2e602cap6@TRPM8
2.62e-23FFCP PHASE1:Hg19::chr14:60958049..60958051,-#_ff13f51a990286586a726a44f2e602cap@chr14:60958049..60958051, -
2.62e-23FFCP PHASE2:Hg19::chr7:39018314..39018323,+#_ff13f51a990286586a726a44f2e602cap@chr7:39018314..39018323, +
2.62e-23FFCP PHASE2:Hg19::chr20:54101133..54101144,+#_ff13f51a990286586a726a44f2e602cap@chr20:54101133..54101144, +
2.62e-23FFCP PHASE1:Hg19::chr8:98051049..98051058,-#_ff13f51a990286586a726a44f2e602cap@chr8:98051049..98051058, -
2.62e-23FFCP PHASE1:Hg19::chr6:129513919..129513922,+#_ff13f51a990286586a726a44f2e602cap@chr6:129513919..129513922, +
2.62e-23FFCP PHASE1:Hg19::chr1:188857554..188857562,-#_ff13f51a990286586a726a44f2e602cap@chr1:188857554..188857562, -
2.62e-23FFCP PHASE1:Hg19::chr19:46531131..46531136,+#_ff13f51a990286586a726a44f2e602cap@chr19:46531131..46531136, +
2.62e-23FFCP PHASE1:Hg19::chr6:141715304..141715307,+#_ff13f51a990286586a726a44f2e602cap@chr6:141715304..141715307, +
2.62e-23FFCP PHASE2:Hg19::chr7:138721040..138721056,+#_ff13f51a990286586a726a44f2e602cap@chr7:138721040..138721056, +
2.62e-23FFCP PHASE2:Hg19::chr3:78360522..78360543,+#_ff13f51a990286586a726a44f2e602cap@chr3:78360522..78360543, +
2.62e-23FFCP PHASE2:Hg19::chr1:68927028..68927036,-#_ff13f51a990286586a726a44f2e602cap@chr1:68927028..68927036, -
2.62e-23FFCP PHASE2:Hg19::chr9:17457123..17457129,+#_ff13f51a990286586a726a44f2e602cap@chr9:17457123..17457129, +
2.62e-23FFCP PHASE2:Hg19::chr6:23637711..23637717,-#_ff13f51a990286586a726a44f2e602cap@chr6:23637711..23637717, -
2.62e-23FFCP PHASE1:Hg19::chr12:27925654..27925663,-#_ff13f51a990286586a726a44f2e602cap@chr12:27925654..27925663, -
2.62e-23FFCP PHASE2:Hg19::chr2:234862409..234862414,+#_ff13f51a990286586a726a44f2e602cap14@TRPM8
2.62e-23FFCP PHASE2:Hg19::chr18:61368086..61368120,+#_ff13f51a990286586a726a44f2e602cap@chr18:61368086..61368120, +
2.62e-23FFCP PHASE1:Hg19::chr5:6961030..6961034,+#_ff13f51a990286586a726a44f2e602cap@chr5:6961030..6961034, +
2.62e-23FFCP PHASE1:Hg19::chr3:102635409..102635414,-#_ff13f51a990286586a726a44f2e602cap@chr3:102635409..102635414, -
2.62e-23FFCP PHASE1:Hg19::chr2:222160756..222160761,+#_ff13f51a990286586a726a44f2e602cap@chr2:222160756..222160761, +
2.62e-23FFCP PHASE1:Hg19::chr14:60194043..60194066,-#_ff13f51a990286586a726a44f2e602cap18@RTN1
2.62e-23FFCP PHASE2:Hg19::chr8:121815999..121816003,-#_ff13f51a990286586a726a44f2e602cap@chr8:121815999..121816003, -
2.62e-23FFCP PHASE1:Hg19::chr13:92571088..92571098,-#_ff13f51a990286586a726a44f2e602cap@chr13:92571088..92571098, -
2.62e-23FFCP PHASE2:Hg19::chr14:60194267..60194275,-#_ff13f51a990286586a726a44f2e602cap20@RTN1
2.62e-23FFCP PHASE2:Hg19::chr10:129704201..129704232,-#_ff13f51a990286586a726a44f2e602cap@chr10:129704201..129704232, -
2.62e-23FFCP PHASE1:Hg19::chr8:116215298..116215305,+#_ff13f51a990286586a726a44f2e602cap@chr8:116215298..116215305, +
2.62e-23FFCP PHASE2:Hg19::chr8:98104439..98104444,-#_ff13f51a990286586a726a44f2e602cap@chr8:98104439..98104444, -
2.62e-23FFCP PHASE2:Hg19::chr7:68735078..68735090,+#_ff13f51a990286586a726a44f2e602cap@chr7:68735078..68735090, +
2.62e-23FFCP PHASE1:Hg19::chr10:129704395..129704457,+#_ff13f51a990286586a726a44f2e602cap@chr10:129704395..129704457, +
2.62e-23FFCP PHASE2:Hg19::chr17:79974020..79974025,+#_ff13f51a990286586a726a44f2e602cap@chr17:79974020..79974025, +
2.62e-23FFCP PHASE2:Hg19::chr12:76206813..76206837,-#_ff13f51a990286586a726a44f2e602cap@chr12:76206813..76206837, -
2.62e-23FFCP PHASE1:Hg19::chr8:98073725..98073731,-#_ff13f51a990286586a726a44f2e602cap@chr8:98073725..98073731, -
2.62e-23FFCP PHASE1:Hg19::chr21:11130568..11130575,+#_ff13f51a990286586a726a44f2e602cap@chr21:11130568..11130575, +
2.62e-23FFCP PHASE1:Hg19::chr16:83649482..83649491,+#_ff13f51a990286586a726a44f2e602cap@chr16:83649482..83649491, +
2.62e-23FFCP PHASE2:Hg19::chr7:120381610..120381618,+#_ff13f51a990286586a726a44f2e602cap@chr7:120381610..120381618, +
2.62e-23FFCP PHASE1:Hg19::chr12:88178319..88178329,-#_ff13f51a990286586a726a44f2e602cap2@MKRN9P
2.62e-23FFCP PHASE2:Hg19::chr2:97626185..97626188,-#_ff13f51a990286586a726a44f2e602cap@chr2:97626185..97626188, -
2.62e-23FFCP PHASE1:Hg19::chr4:178653531..178653568,+#_ff13f51a990286586a726a44f2e602cap@chr4:178653531..178653568, +
2.62e-23FFCP PHASE1:Hg19::chr21:43917055..43917058,-#_ff13f51a990286586a726a44f2e602cap@chr21:43917055..43917058, -
2.62e-23FFCP PHASE2:Hg19::chr7:95766200..95766209,-#_ff13f51a990286586a726a44f2e602cap@chr7:95766200..95766209, -

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