EntrezGene:12727

Symbol:	Clcn4-2
Description:	chloride channel 4-2
Synonyms:	Clc4-2, Clcn4
Species:	Mouse (Mus musculus)
Xrefs:	ExpandEntrezGene:12727 MGI:104571 Ensembl:ENSMUSG00000000605 Vega:OTTMUSG00000037804
Associated motifs:	NA
Transcripton Factor?:	No

TSS regions

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Mm9::chr7:7251449..7251460,-	p3@Clcn4-2
Mm9::chr7:7251472..7251501,-	p1@Clcn4-2
Mm9::chr7:7252181..7252197,-	p4@Clcn4-2
Mm9::chr7:7252203..7252251,-	p2@Clcn4-2
TSS peak ID	Short_description

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TSS expression

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Sample	p1@Clcn4-2	p2@Clcn4-2	p3@Clcn4-2	p4@Clcn4-2

Sample	p1@Clcn4-2	p2@Clcn4-2	p3@Clcn4-2	p4@Clcn4-2
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1	115.77	2.26	3.39	5.65
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5	106.51	1.51	6.80	8.31
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4	101.39	2.06	3.43	0.69
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3	95.67	2.86	4.01	4.01
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6	93.83	0.68	4.73	2.70
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6	92.44	0.00	0.00	0.00
cortex, neonate N30.CNhs11107.1392-42F2	90.27	3.84	4.09	5.63
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2	89.30	1.84	3.68	4.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8	88.82	2.72	4.08	4.53
CD326+ enterocyte, pool1.CNhs13542.11848-124I3	86.50	1.81	0.91	1.21
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9	86.47	2.07	5.70	3.11
corpus striatum, neonate N00.CNhs11226.630-43F1	84.19	4.02	3.27	3.14
Mouse Granule cells, donor2.CNhs12357.11731-123E3	83.05	5.29	5.82	2.64
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7	79.71	6.30	2.70	2.25
cortex, adult.CNhs10473.12-14D5	79.26	4.69	2.78	3.48
corpus striatum, adult.CNhs10487.19-21D8	77.78	3.20	2.29	3.20
diencephalon, neonate N30.CNhs11201.1388-42B2	77.39	2.43	4.06	3.73
medulla oblongata, adult.CNhs10477.17-12C2	75.94	1.77	3.21	3.21
hippocampus, adult.CNhs10478.13-16E8	75.91	1.89	2.52	2.73
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3	75.72	2.55	4.09	1.92
hippocampus, neonate N00.CNhs11228.627-43G1	74.81	4.01	4.01	5.45
olfactory brain, adult.CNhs10489.18-22I9	74.55	4.18	2.25	4.50
Mouse hepatocyte, donor6.CNhs13090.11822-124F4	73.42	0.65	2.60	0.65
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7	72.66	3.38	1.84	1.84
medulla oblongata, neonate N30.CNhs11200.1396-42A3	71.97	3.05	3.75	1.76
corpora quadrigemina, adult.CNhs10501.16-22A4	68.90	3.74	3.74	3.59
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8	68.80	5.10	0.00	0.00
Mouse Granule cells, donor3.CNhs12108.11636-122C7	68.45	5.70	9.51	1.27
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4	67.84	2.79	2.51	2.23
diencephalon, adult.CNhs10482.20-12F2	67.53	3.32	4.36	2.08
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1	67.10	4.10	5.03	2.80
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7	66.85	2.75	5.50	5.67
CD326+ enterocyte, pool2.CNhs13197.11849-124I4	66.62	0.50	1.00	1.50
cerebellum, neonate N30.CNhs11135.1395-42I2	66.60	5.24	4.61	2.72
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6	65.78	5.27	3.99	3.27
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4	63.17	3.30	6.07	4.88
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6	61.59	7.35	3.68	2.76
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5	61.18	2.65	4.64	2.65
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4	61.02	7.32	6.13	3.93
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6	59.74	3.06	3.06	2.14
spinal cord, adult.CNhs10505.24-13C9	58.78	3.15	3.89	2.97
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9	56.58	2.73	2.52	1.47
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3	56.16	3.30	6.61	0.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5	54.27	5.27	2.57	2.03
Mouse Granule cells, donor1.CNhs12131.11713-123C3	54.02	3.44	5.26	3.64
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6	53.62	4.12	4.12	3.24
liver, neonate N30.CNhs11106.1382-42D1	52.59	1.93	0.96	1.93
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1	51.99	2.86	3.14	1.14
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5	51.77	3.38	0.56	2.25
cecum, adult.CNhs10467.37-13H4	50.33	1.86	0.00	0.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2	49.84	4.70	1.92	1.34
liver, adult pregnant day01.CNhs10466.508-5B2	49.51	1.19	1.48	0.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8	49.49	4.69	7.81	4.17
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6	49.14	0.00	0.91	0.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2	48.73	4.80	2.27	1.01
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2	48.63	1.71	1.96	1.84
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7	48.18	0.86	1.72	0.00
heart, neonate N20.CNhs11127.821-26I6	47.95	2.49	1.32	0.73
cerebellum, adult.CNhs10494.15-8B2	46.84	4.10	2.34	2.05
heart, neonate N10.CNhs11118.749-24G1	44.82	3.45	1.97	1.31
lung, neonate N25.CNhs11119.1359-25C7	44.38	1.55	2.76	0.52
Mouse hepatocyte, donor8.CNhs13091.11824-124F6	44.35	3.14	0.00	1.34
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2	43.79	0.34	1.68	0.34
eyeball, adult.CNhs10484.31-12G4	43.77	1.47	2.31	0.21
eyeball, neonate N16.CNhs11188.777-19A2	43.72	2.33	2.33	1.55
heart, neonate N30.CNhs11202.1390-42D2	43.21	2.01	2.01	0.54
GP2+ M cell, pool1.CNhs13228.11845-124H9	42.49	1.15	0.00	0.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5	42.31	3.32	3.42	2.07
intestinal mucosa, adult.CNhs10506.860-29I3	42.29	0.99	2.31	0.33
mammary gland, adult lactating day02.CNhs10480.595-22B6	42.29	0.98	1.48	0.00
heart, neonate N25.CNhs11196.1351-25D3	42.15	1.10	0.66	0.22
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8	41.87	1.75	2.27	1.14
heart, neonate N16.CNhs11209.782-15G1	41.75	3.65	2.76	1.30
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6	41.55	2.11	2.11	1.41
kidney, neonate N25.CNhs11122.1353-25F3	40.82	2.04	1.10	0.78
eyeball, neonate N01.CNhs11140.1532-43E7	40.61	3.46	4.23	3.20
kidney, neonate N30.CNhs11203.1385-42H1	40.47	1.97	1.48	1.23
heart, neonate N03.CNhs11221.1349-25I2	40.32	2.47	1.65	0.99
adrenal gland, neonate N25.CNhs11223.1377-27I3	40.21	1.13	1.26	0.50
intestine, neonate N10.CNhs11098.755-23A5	39.97	1.17	0.78	0.97
lung, neonate N10.CNhs11219.750-23E6	39.23	1.91	2.71	1.59
adrenal gland, adult.CNhs10508.49-24D7	38.74	1.93	1.63	0.74
thymus, neonate N30.CNhs11132.1393-42G2	38.69	2.57	1.29	0.35
submandibular gland, adult.CNhs10469.59-29C1	38.52	2.49	2.49	0.62
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9	38.44	0.00	2.18	1.45
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5	38.04	1.05	0.35	0.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2	37.85	0.69	1.15	0.23
stomach, neonate N25.CNhs11104.1355-25E4	37.43	0.00	2.09	0.26
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8	37.14	0.93	0.23	0.00
mammary gland, adult pregnant day19.CNhs10476.588-5H2	36.70	1.38	1.38	0.55
intestine, neonate N06.CNhs11102.688-20B8	36.69	1.76	0.50	1.26
stomach, neonate N30.CNhs11134.1386-42I1	36.68	2.20	0.65	0.52
lung, neonate N20.CNhs11109.822-18A4	36.54	2.13	2.13	0.49
tongue, adult.CNhs10499.32-1B4	36.50	2.04	1.13	0.91
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9	36.41	1.16	2.32	1.03
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4	36.29	1.20	1.88	0.34
lung, neonate N00.CNhs11224.640-42C6	36.29	2.15	1.56	1.17
eyeball, neonate N02.CNhs11205.1551-44G8	36.08	3.84	4.03	1.50
lung, neonate N30.CNhs11133.1394-42H2	36.02	2.17	1.16	1.59
lung, neonate N06.CNhs11212.683-20E5	35.78	1.89	1.42	0.95
ovary, adult.CNhs10507.91-2I7	35.63	1.42	1.42	0.43
kidney, neonate N20.CNhs11113.832-19I1	35.57	2.51	1.92	0.89
intestine, neonate N25.CNhs11121.1352-25E3	35.45	1.30	1.95	0.22
intestine, neonate N30.CNhs11131.1384-42G1	35.45	1.39	1.79	0.40
intestine, neonate N01.CNhs11192.1322-23E9	35.41	0.82	0.99	0.33
lung, neonate N07.CNhs11111.715-19A3	35.21	2.66	2.66	3.76
intestine, neonate N20.CNhs11187.827-18D1	35.05	1.80	0.90	0.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5	34.55	2.06	1.03	0.52
whole body, embryo E17.CNhs10517.475-3I5	34.22	1.25	1.50	2.00
prostate, adult.CNhs10470.859-1F8	34.18	1.10	1.32	0.88
urinary bladder, adult.CNhs10481.879-12E4	34.00	0.97	1.16	0.77
skin, neonate N06.CNhs11097.693-20I5	33.90	1.55	1.43	0.36
aorta, adult.CNhs10498.46-23H1	33.84	2.89	1.59	0.87
heart, embryo E18.CNhs11030.1283-20G3	33.80	2.68	2.15	0.80
pancreas, neonate N25.CNhs11094.1555-45E2	33.73	0.00	1.05	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5	33.67	1.12	0.56	0.56
skin, neonate N10.CNhs11108.762-6C4	33.65	1.15	1.15	0.49
small intestine, neonate N16.CNhs11114.790-21I1	33.52	1.46	1.75	0.29
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1	33.28	0.96	0.64	0.00
lung, adult.CNhs10474.28-22B1	33.26	1.11	1.66	0.92
Ileum epithelium, pool2.CNhs13232.10253-104C1	33.02	0.25	0.76	0.76
GP2+ M cell, pool3.CNhs13240.11847-124I2	32.97	1.29	1.29	0.22
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1	32.94	1.68	1.01	0.67
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5	32.93	1.46	0.91	0.55
Mouse hepatocyte, donor3.CNhs12615.11637-122C8	32.92	1.08	0.00	0.54
intestine, neonate N07.CNhs11095.720-20F2	32.83	2.19	0.60	0.99
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2	32.59	2.11	1.00	0.62
liver, neonate N20.CNhs11220.823-25A3	32.58	0.51	2.27	0.00
eyeball, neonate N00.CNhs11207.633-15C6	32.52	4.69	2.99	2.04
Ileum epithelium, pool1.CNhs13199.10252-104B9	32.49	0.19	0.95	0.00
colon, adult.CNhs10468.36-18H7	32.44	1.02	0.26	0.26
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3	32.17	2.03	2.03	9.86
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8	31.93	1.11	0.67	0.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2	31.70	0.79	0.95	0.16
stomach, neonate N07.CNhs11210.718-18A9	31.66	0.74	1.82	0.83
liver, neonate N06.CNhs11101.684-20A8	31.63	2.88	4.31	1.44
thymus, adult.CNhs10471.38-12B5	31.60	0.95	0.95	0.63
liver, neonate N25.CNhs11198.1368-26H1	31.57	1.44	0.72	0.00
stomach, neonate N03.CNhs11193.1340-24B8	31.42	1.21	0.67	0.40
heart, neonate N00.CNhs11213.639-21E3	31.41	3.15	1.05	1.28
forelimb, embryo E17.CNhs10598.1517-43C4	31.34	2.09	1.39	0.35
Mouse hepatocyte, donor1.CNhs13078.11714-123C4	31.28	2.04	2.72	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5	30.69	3.27	1.64	3.68
uterus, adult pregnant day19.CNhs10497.590-15F5	30.59	1.31	0.56	0.94
thymus, neonate N10.CNhs11194.748-24E4	29.95	1.51	1.21	0.40
intestine, neonate N00.CNhs11126.644-26D1	29.90	0.00	0.95	0.00
thymus, neonate N25.CNhs11125.1362-25G7	29.73	1.54	1.06	0.19
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7	29.55	0.50	1.01	0.17
whole body, neonate N10.CNhs10518.761-6B4	29.45	0.93	1.39	1.62
thymus, neonate N20.CNhs11186.820-7A2	29.33	1.85	0.68	0.19
epididymis, adult.CNhs10490.58-23B2	29.32	2.02	1.52	1.52
oviduct, adult pregnant day01.CNhs10500.988-6G6	29.03	2.64	1.65	1.15
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1	28.94	0.86	0.29	0.57
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1	28.83	1.09	1.63	0.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3	28.78	2.72	0.78	0.19
whole body, embryo E18.CNhs10516.493-3B3	28.77	2.57	1.64	0.94
uterus, adult.CNhs10509.92-27E5	28.75	1.83	2.56	0.37
vagina, adult.CNhs10502.89-27D5	28.73	2.14	1.29	0.43
whole body, neonate N06.CNhs10515.692-21D1	28.68	0.88	0.88	0.44
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1	28.65	3.02	0.00	1.51
pituitary gland, adult.CNhs10493.21-1G8	28.60	3.06	1.02	2.72
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9	28.59	1.13	0.28	1.13
GP2+ M cell, pool2.CNhs13231.11846-124I1	28.43	0.43	0.43	0.43
whole body, neonate N00.CNhs10525.657-19C2	28.36	1.50	1.29	1.93
whole body, neonate N01.CNhs10576.659-23C6	28.31	1.34	0.77	1.15
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5	28.23	1.33	2.44	1.33
pancreas, neonate N02.CNhs11139.1539-43D8	28.16	1.78	1.43	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5	28.04	1.39	2.20	0.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5	27.97	1.93	0.77	0.96
Mouse Schwann, donor2.CNhs12573.11746-123F9	27.89	0.30	0.91	0.30
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4	27.83	0.41	1.37	0.14
intestine, embryo E18.CNhs10526.1289-20F7	27.77	0.38	1.52	0.57
Mouse Schwann, donor1.CNhs12507.11728-123D9	27.72	1.06	0.83	0.61
kidney, neonate N10.CNhs11206.758-6D5	27.70	2.21	1.64	1.83
intestine, embryo E16.CNhs10585.463-22H4	27.63	2.02	1.01	1.82
pancreas, neonate N16.CNhs11136.787-43B6	27.50	2.21	0.95	0.00
adrenal gland, neonate N00.CNhs11191.1311-23C1	27.40	1.76	1.29	1.88
skin, neonate N00.CNhs11124.650-25G4	27.29	2.42	0.65	0.97
accessory axillary lymph node, adult.CNhs10475.1063-29H9	27.19	1.29	1.04	0.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6	27.18	0.91	0.46	0.46
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8	27.18	2.45	0.67	2.01
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5	27.08	1.62	1.32	1.62
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7	26.97	1.12	0.84	0.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1	26.95	0.00	0.00	1.28
skin, neonate N03.CNhs11215.662-22H3	26.78	2.05	1.03	0.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5	26.69	1.58	2.27	1.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2	26.64	0.68	1.37	0.68
adrenal gland, embryo E17.CNhs11043.1263-45I1	26.52	1.38	1.61	0.46
liver, neonate N10.CNhs11115.751-24B9	26.52	0.94	1.25	0.94
whole body, embryo E17.5.CNhs10513.490-9F9	26.43	2.12	1.54	0.58
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5	26.40	1.37	0.00	1.71
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1	26.38	1.02	2.34	2.14
skin, adult.CNhs10492.30-1C3	26.38	2.97	0.33	0.16
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6	26.31	0.42	1.70	0.00
adrenal gland, embryo E18.CNhs11026.1262-18F5	26.23	0.90	1.36	0.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5	26.03	2.02	3.03	2.02
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5	26.02	1.74	1.16	1.89
pituitary gland, embryo E17.CNhs11039.1265-44F5	25.83	2.47	0.49	0.99
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5	25.74	0.83	1.07	0.95
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5	25.67	0.96	0.96	2.25
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5	25.67	1.77	1.09	1.36
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5	25.50	1.41	0.85	1.32
bone (os femoris), neonate N16.CNhs11225.1525-43A6	25.40	2.87	0.88	0.66
heart, embryo E17.CNhs11025.479-18E5	25.35	1.86	0.93	1.16
kidney, neonate N00.CNhs11214.646-21G7	25.25	1.89	1.12	1.12
bone (os femoris), neonate N02.CNhs11227.1985-43F5	25.24	2.10	1.13	1.13
pancreas, embryo E18.CNhs10580.1535-43I7	25.21	1.23	0.31	0.31
eyeball, embryo E17.CNhs11023.1261-18D4	25.17	2.71	2.86	2.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8	25.11	2.09	1.26	0.84
thymus, neonate N03.CNhs11137.2104-43C7	25.11	1.03	0.89	0.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3	24.99	1.72	1.94	1.72
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5	24.99	2.10	0.00	0.26
thymus, neonate N06.CNhs11197.681-26C4	24.94	1.92	0.81	0.61
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9	24.71	4.71	4.12	3.53
vesicular gland, adult.CNhs10491.51-27F8	24.58	1.50	0.00	0.50
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1	24.44	0.00	1.29	0.51
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8	24.39	0.44	0.44	0.88
whole body, embryo E12.CNhs10587.857-27C9	24.34	1.20	1.20	1.60
stomach, embryo E17.CNhs11006.1035-18D5	24.25	1.67	1.67	1.05
thymus, embryo E18.CNhs10595.1273-19G4	24.24	1.39	1.19	0.00
forelimb, embryo E15.CNhs11007.437-20E7	24.19	0.83	1.11	1.11
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7	24.14	0.24	1.91	0.96
testis, embryo E16.CNhs11033.470-26G5	24.11	0.78	1.56	0.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3	24.05	1.66	1.52	0.97
pancreas, neonate N00.CNhs11105.645-26G9	24.03	0.00	1.55	0.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5	23.96	2.45	1.13	0.75
heart, embryo E14.CNhs10597.403-26D4	23.91	2.13	0.95	0.71
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3	23.90	5.27	1.11	1.11
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5	23.86	3.41	0.77	2.01
thymus, neonate N02.CNhs11181.1541-43F8	23.80	1.08	1.20	0.12
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5	23.78	2.13	1.77	1.42
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5	23.78	2.62	1.35	1.61
pituitary gland, neonate N00.CNhs11190.1308-22E9	23.75	1.22	3.35	1.52
pancreas, neonate N30.CNhs11182.1548-44H5	23.72	1.03	1.03	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6	23.63	1.19	2.04	0.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6	23.46	0.34	1.37	0.34
intestine, embryo E17.CNhs10582.482-18D3	23.35	1.33	0.67	0.22
stomach, embryo E18.CNhs10999.1286-20C6	23.15	1.31	0.87	0.44
forelimb, embryo E18.CNhs11008.1520-43B5	23.05	2.06	0.62	0.82
heart, embryo E15.CNhs11017.431-16C8	23.02	1.97	0.59	0.79
thymus, neonate N07.CNhs11211.713-19D3	22.94	1.30	0.30	0.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5	22.86	1.91	0.48	3.33
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5	22.82	2.31	0.58	1.16
bone (os femoris), neonate N20.CNhs11195.1350-25C3	22.79	2.42	1.94	0.48
placenta, adult pregnant day17.CNhs10464.577-18G3	22.67	1.06	1.48	1.06
pituitary gland, embryo E16.CNhs11036.449-43F6	22.65	2.68	1.61	0.89
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3	22.51	1.57	0.00	0.52
lung, embryo E18.CNhs10583.1287-20I6	22.38	1.43	0.95	1.43
heart, embryo E13.CNhs11013.376-3I9	22.33	1.44	1.08	0.72
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5	22.25	2.88	1.65	2.47
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6	22.14	0.40	1.58	0.79
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9	22.11	1.12	1.96	1.68
testis, neonate N00.CNhs11189.1300-22B7	22.06	2.23	1.53	1.41
stomach, adult.CNhs10503.33-1H6	21.96	0.00	0.00	0.95
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4	21.86	0.81	0.81	0.40
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5	21.84	0.82	1.03	1.03
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5	21.77	2.58	1.03	1.32
heart, embryo E16.CNhs11021.457-17C6	21.60	3.24	0.31	0.46
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2	21.37	0.65	0.65	0.87
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5	21.33	1.17	2.05	0.88
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5	21.32	2.95	1.22	1.22
liver, neonate N07.CNhs11103.716-20H2	21.21	1.49	2.60	0.74
amnion, adult pregnant day17.5.CNhs10488.583-22A8	21.01	1.48	0.99	0.25
liver, embryo E16.CNhs10523.462-17F5	20.98	0.48	0.48	0.00
testis, embryo E17.CNhs11029.486-18I5	20.92	1.03	1.94	0.90
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4	20.88	2.91	0.97	1.46
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3	20.85	0.00	0.81	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5	20.79	1.27	0.25	1.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5	20.74	2.86	2.15	0.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C4	20.72	0.84	0.70	0.00
pituitary gland, embryo E12.CNhs11018.346-16E6	20.71	1.98	1.62	0.90
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7	20.62	1.02	0.41	0.61
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5	20.51	1.78	1.31	1.59
placenta, adult pregnant day10.CNhs10472.539-13I7	20.42	0.47	0.47	0.47
pituitary gland, embryo E14.CNhs11037.398-44A5	20.36	2.36	1.50	1.07
liver, neonate N03.CNhs11123.1345-25G2	20.32	1.65	1.92	0.00
testis, embryo E18.CNhs11027.503-18G5	20.27	1.86	0.84	0.51
eyeball, embryo E14.CNhs10521.399-16E2	20.23	0.46	2.07	0.23
forelimb, embryo E14.CNhs10577.413-26A8	20.17	1.32	1.32	0.22
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9	20.11	0.78	1.57	0.52
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9	19.97	1.22	0.51	0.51
lung, embryo E14.CNhs10604.404-26F8	19.88	0.49	1.47	0.33
spleen, adult.CNhs10465.25-2G2	19.82	1.37	0.85	0.17
spleen, neonate N20.CNhs11112.824-19H1	19.82	0.96	0.68	0.27
whole body, embryo E13.CNhs10512.372-23H2	19.81	1.54	1.88	0.68
stomach, embryo E16.CNhs11022.459-17D4	19.76	0.86	0.97	0.65
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1	19.65	0.00	0.67	0.00
intestine, adult.CNhs10496.178-9A3	19.57	1.06	0.53	0.26
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1	19.56	0.00	0.00	0.00
bone (os femoris), adult.CNhs10483.56-12G2	19.46	0.00	2.65	0.00
intestine, embryo E15.CNhs10602.976-16D8	19.33	0.77	1.80	0.13
lung, embryo E17.CNhs10605.480-44A6	19.10	2.01	0.84	0.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7	19.09	1.19	0.68	0.17
ovary, neonate N00.CNhs11217.1299-22I4	19.06	1.95	2.12	1.14
heart, embryo E11.CNhs10586.331-24E9	18.85	0.83	0.41	1.45
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4	18.68	1.02	1.02	0.89
testis, neonate N07.CNhs11222.726-26I4	18.62	1.69	1.17	1.30
adrenal gland, embryo E16.CNhs11004.1254-43D6	18.57	0.30	0.61	1.52
pancreas, neonate N01.CNhs11138.1531-43D7	18.54	0.73	1.09	0.73
heart, embryo E12.CNhs11015.353-12F5	18.53	2.35	1.41	1.17
spleen, neonate N25.CNhs11099.1354-25G3	18.53	0.46	1.37	0.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2	18.49	1.64	1.64	0.94
spleen, neonate N10.CNhs11116.752-24D1	18.46	1.13	1.51	0.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2	18.35	0.00	0.39	1.56
testis, neonate N20.CNhs11110.839-18H3	18.12	16.91	0.00	0.97
kidney, embryo E16.CNhs10584.464-22A5	18.03	1.13	0.00	2.25
whole body, embryo E14.5.CNhs10578.420-27D2	17.99	1.70	1.46	0.97
testis, neonate N30.CNhs11130.1391-42E2	17.86	21.89	0.00	1.44
liver, embryo E15.CNhs10520.433-16D7	17.85	0.81	0.41	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7	17.80	1.98	0.00	0.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2	17.76	1.42	0.00	0.71
pituitary gland, embryo E15.CNhs10592.427-16B9	17.73	2.66	1.60	1.24
stomach, embryo E12.CNhs10588.356-43E3	17.71	0.79	0.63	0.32
eyeball, embryo E15.CNhs10593.426-16C9	17.65	1.80	2.16	0.54
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8	17.63	0.76	0.13	1.01
stomach, embryo E15.CNhs10603.1252-16G8	17.49	1.63	2.03	0.41
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1	17.35	2.21	0.32	0.32
Mouse Microglia, donor2.CNhs12634.11736-123E8	17.29	4.23	1.54	0.77
liver, embryo E18.CNhs10579.499-43G4	17.26	1.44	0.29	0.29
pancreas, adult.CNhs10486.34-16E4	17.26	0.00	0.00	0.00
pituitary gland, embryo E13.CNhs11009.370-44C7	16.95	0.91	0.78	0.52
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2	16.88	1.29	1.39	0.40
thymus, embryo E17.CNhs10581.478-18C1	16.83	1.61	0.72	0.00
lung, embryo E15.CNhs11020.432-17C5	16.80	1.36	0.68	0.34
whole body, embryo E16.CNhs10514.453-14F2	16.73	0.74	0.92	1.47
kidney, embryo E15.CNhs10997.434-16F8	16.68	1.83	0.91	0.91
pancreas, embryo E15.CNhs11042.1556-45F2	16.33	0.91	1.21	0.00
spleen, embryo E16.CNhs11035.461-43C1	16.30	0.41	0.62	0.21
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5	16.20	0.85	0.00	0.00
lung, embryo E16.CNhs10998.458-17B6	16.19	3.05	0.70	0.47
adrenal gland, embryo E14.CNhs11038.406-44C5	16.13	1.73	0.87	0.35
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7	16.05	0.84	1.41	0.84
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1	16.03	0.64	0.88	0.00
ovary, embryo E18.CNhs11040.505-44H7	16.03	1.60	0.71	1.25
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6	15.96	0.50	0.17	0.33
pancreas, embryo E17.CNhs10599.1558-45G3	15.95	1.48	1.18	0.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8	15.90	1.41	0.00	0.35
kidney, embryo E18.CNhs11001.1288-20C7	15.90	1.36	0.58	0.97
eyeball, embryo E12.CNhs11016.345-16C6	15.87	1.69	0.65	0.39
Mouse Astrocytes, donor3.CNhs12107.11633-122C4	15.81	1.44	1.44	0.00
intestine, embryo E13.CNhs11010.381-16D5	15.79	1.39	0.93	1.16
intestine, embryo E12.CNhs11019.1251-16I5	15.78	0.85	0.85	0.21
forelimb, embryo E13.CNhs10589.384-1E2	15.66	1.58	0.18	1.23
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7	15.65	0.00	0.00	1.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1	15.63	0.78	0.00	0.78
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1	15.60	1.80	0.60	0.60
liver, embryo E14.CNhs10594.409-16E1	15.52	0.90	0.22	0.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6	15.38	1.23	0.00	0.62
liver, embryo E17.CNhs10510.481-18A3	15.28	0.25	0.25	0.25
kidney, embryo E17.CNhs11028.483-18I2	15.27	1.22	0.81	0.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7	15.25	0.98	0.98	0.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2	15.20	1.27	0.00	0.25
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7	15.10	1.32	0.96	0.72
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7	14.85	0.90	0.00	0.00
testis, embryo E15.CNhs11034.443-27C5	14.73	1.16	0.83	0.17
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5	14.69	1.40	0.70	0.70
forelimb, embryo E12.CNhs10600.359-14H2	14.56	0.76	1.32	0.57
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3	14.13	1.28	0.55	0.92
gonad, embryo E13.CNhs11044.1564-45I6	14.13	0.60	0.60	1.19
pancreas, embryo E14.CNhs11012.405-44F4	13.84	0.97	0.49	0.49
liver, neonate N00.CNhs11117.641-24F4	13.78	1.62	0.65	0.65
thymus, embryo E15.CNhs11005.430-45I2	13.35	1.44	0.62	0.41
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6	13.21	1.02	0.68	0.00
Mouse Microglia, donor1.CNhs12629.11718-123C8	13.18	1.20	0.00	0.60
testis, embryo E13.CNhs11031.389-23F5	13.16	1.50	0.30	0.75
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3	13.14	0.00	0.51	0.00
testis, neonate N10.CNhs11204.763-44D9	13.00	1.26	0.52	0.73
lung, embryo E12.CNhs10522.354-16G2	12.89	0.76	0.19	0.00
spleen, embryo E18.CNhs11011.1271-21F2	12.78	1.11	0.74	0.74
forelimb, embryo E11.CNhs10596.335-25E2	12.72	1.51	0.22	0.00
thymus, embryo E14.CNhs11041.402-44I4	12.37	0.81	0.81	1.22
kidney, embryo E14.CNhs10606.411-4I9	12.14	0.76	1.14	0.38
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1	12.12	0.87	0.22	0.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3	11.95	0.52	0.78	0.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8	11.94	0.70	0.70	0.00
thymus, embryo E16.CNhs11002.456-26C5	11.69	0.78	0.39	0.52
liver, embryo E12.CNhs10601.355-15F8	11.68	0.17	0.50	0.50
pancreas, embryo E16.CNhs11003.460-26E5	11.50	1.32	0.00	0.19
whole body, embryo E14.CNhs10519.395-14B1	11.11	1.05	0.63	1.05
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2	10.81	0.77	0.51	0.26
liver, embryo E13.CNhs10524.378-3H6	10.42	0.59	0.00	0.20
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3	9.53	1.27	0.64	0.00
testis, adult.CNhs10504.57-7G5	8.46	19.73	0.00	0.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3	8.44	0.44	0.00	0.00
whole body, embryo E11.CNhs11014.324-5I8	8.20	0.73	0.52	0.83
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5	4.37	0.34	0.17	0.34
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7	3.50	0.18	0.27	0.36
Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7	0.00	0.00	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9	0.00	0.00	0.00	0.00

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p1@Clcn4-2
p2@Clcn4-2
p3@Clcn4-2
p4@Clcn4-2

• Click each plot point to find sample in table

ENCODE TF ChIP-seq peak enrichment analysis Analyst: Erik Arner <br>Summary: For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><br><br>link to source dataset.<br>data

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No analysis results for this cluster

Details<b>Summary:</b>It includes sequences from the international sequence collaboration, Swiss-Prot, and RefSeq. The RefSeq subset of this file is also available as gene2refseq.<br><br>links to source dataset.<br>human <br>mouse

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GeneID:	12727
LocusTag:	-
chromosome:	7
map location:	7 A1, 7 4.0 cM, 7 A1;;7 4.0 cM
type of gene:	protein-coding
Symbol from nomenclature authority:	Clcn4-2
Full name from nomenclature authority:	chloride channel 4-2
Nomenclature status:	O
Other designations:	H(+)/Cl(-) exchange transporter 4, chloride channel protein 4, chloride transporter ClC-4, clC-4, voltage-gated chloride channel ClC-4A, H(+)/Cl(-) exchange transporter 4;;chloride channel protein 4;;chloride transporter ClC-4;;clC-4;;voltage-gated chloride channel ClC-4A
Modification date:	15.01.2012