EntrezGene:16870

Symbol:	Lhx2
Description:	LIM homeobox protein 2
Synonyms:	LH2A, Lh-2, Lim2, ap, apterous
Species:	Mouse (Mus musculus)
Xrefs:	ExpandEntrezGene:16870 MGI:96785 Ensembl:ENSMUSG00000000247 Vega:OTTMUSG00000012866
Associated motifs:	NA
Transcripton Factor?:	Yes

TSS regions

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Mm9::chr2:38194778..38194798,+	p3@Lhx2
Mm9::chr2:38196588..38196600,+	p4@Lhx2
Mm9::chr2:38206580..38206600,+	p2@Lhx2
Mm9::chr2:38206725..38206734,+	p14@Lhx2
Mm9::chr2:38206744..38206766,+	p1@Lhx2
Mm9::chr2:38207200..38207210,+	p13@Lhx2
TSS peak ID	Short_description

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TSS expression

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Sample	p1@Lhx2	p2@Lhx2	p3@Lhx2	p4@Lhx2

Sample	p1@Lhx2	p2@Lhx2	p3@Lhx2	p4@Lhx2
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2	115.34	34.23	2.40	0.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5	102.06	115.03	10.26	3.92
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9	82.03	135.45	8.83	3.58
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5	77.77	124.95	14.83	5.50
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8	76.23	21.31	4.61	0.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3	69.80	17.69	2.53	0.00
hippocampus, neonate N00.CNhs11228.627-43G1	68.23	67.40	8.03	1.34
eyeball, neonate N00.CNhs11207.633-15C6	67.02	51.84	0.34	0.00
eyeball, neonate N01.CNhs11140.1532-43E7	66.62	51.76	0.64	0.13
eyeball, neonate N02.CNhs11205.1551-44G8	64.00	47.88	0.84	0.00
forelimb, embryo E11.CNhs10596.335-25E2	56.91	43.76	0.22	0.00
eyeball, embryo E15.CNhs10593.426-16C9	53.48	41.59	0.54	0.00
eyeball, embryo E14.CNhs10521.399-16E2	46.90	28.51	0.00	0.23
Mouse Microglia, donor2.CNhs12634.11736-123E8	45.34	1.92	0.00	0.00
hippocampus, adult.CNhs10478.13-16E8	43.11	26.71	1.68	0.00
eyeball, embryo E12.CNhs11016.345-16C6	41.38	40.21	0.39	0.26
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1	40.66	33.32	1.13	0.00
eyeball, embryo E17.CNhs11023.1261-18D4	39.48	39.33	0.15	0.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7	38.50	49.67	1.03	0.00
cortex, adult.CNhs10473.12-14D5	37.02	34.07	1.56	0.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4	32.88	29.46	1.37	0.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3	32.66	37.24	0.57	0.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2	31.48	22.54	1.35	0.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2	31.44	20.13	0.58	0.19
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2	30.38	37.29	2.30	0.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6	30.33	34.93	0.92	0.00
skin, adult.CNhs10492.30-1C3	30.01	49.96	2.64	0.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6	29.70	33.75	0.68	0.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8	29.45	33.99	1.36	0.00
Mouse Granule cells, donor1.CNhs12131.11713-123C3	28.73	63.93	5.87	2.23
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5	28.70	47.59	0.76	0.00
Mouse Granule cells, donor2.CNhs12357.11731-123E3	28.57	39.15	6.35	3.17
forelimb, embryo E12.CNhs10600.359-14H2	27.99	27.23	0.38	0.00
Mouse Granule cells, donor3.CNhs12108.11636-122C7	26.62	65.92	3.17	0.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9	26.41	32.10	2.07	0.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8	25.52	41.67	3.65	1.04
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7	25.22	40.98	0.00	0.45
skin, neonate N03.CNhs11215.662-22H3	25.21	29.49	3.80	0.24
olfactory brain, adult.CNhs10489.18-22I9	24.10	7.07	0.64	0.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4	23.74	33.10	2.51	1.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4	21.23	21.04	3.29	0.55
forelimb, embryo E13.CNhs10589.384-1E2	21.11	22.70	0.53	0.00
cortex, neonate N30.CNhs11107.1392-42F2	20.71	24.29	1.28	0.00
pituitary gland, embryo E12.CNhs11018.346-16E6	20.71	15.85	0.72	1.98
pituitary gland, embryo E13.CNhs11009.370-44C7	20.70	15.39	1.03	2.20
skin, neonate N00.CNhs11124.650-25G4	20.34	31.97	6.14	0.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C4	19.04	2.94	0.14	0.00
skin, neonate N06.CNhs11097.693-20I5	17.79	28.53	2.27	0.00
whole body, embryo E11.CNhs11014.324-5I8	17.64	20.24	1.04	1.76
Mouse Microglia, donor1.CNhs12629.11718-123C8	16.78	0.90	0.00	0.00
corpus striatum, adult.CNhs10487.19-21D8	16.47	8.24	0.00	0.00
whole body, embryo E17.CNhs10517.475-3I5	16.24	19.49	3.00	0.50
eyeball, neonate N16.CNhs11188.777-19A2	15.78	11.38	0.26	0.00
diencephalon, neonate N30.CNhs11201.1388-42B2	13.79	6.33	0.49	0.00
forelimb, embryo E15.CNhs11007.437-20E7	13.35	7.51	0.28	0.00
whole body, embryo E12.CNhs10587.857-27C9	13.17	36.71	2.79	2.79
whole body, embryo E13.CNhs10512.372-23H2	11.95	17.41	1.20	2.56
pituitary gland, embryo E14.CNhs11037.398-44A5	11.79	12.86	1.29	1.07
skin, neonate N10.CNhs11108.762-6C4	11.49	30.53	0.98	0.16
diencephalon, adult.CNhs10482.20-12F2	11.22	2.70	0.42	0.00
whole body, embryo E14.CNhs10519.395-14B1	11.11	15.72	0.84	0.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3	10.60	3.70	0.77	0.13
forelimb, embryo E14.CNhs10577.413-26A8	10.52	7.45	0.66	0.00
whole body, embryo E16.CNhs10514.453-14F2	10.48	9.74	0.92	0.37
placenta, adult pregnant day17.CNhs10464.577-18G3	10.17	2.54	0.00	0.00
whole body, neonate N00.CNhs10525.657-19C2	9.45	11.17	1.50	0.21
corpus striatum, neonate N00.CNhs11226.630-43F1	9.42	7.41	0.13	0.00
whole body, embryo E14.5.CNhs10578.420-27D2	8.51	10.70	0.00	1.22
liver, embryo E12.CNhs10601.355-15F8	8.34	6.17	0.17	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5	8.34	7.58	0.25	0.00
liver, neonate N00.CNhs11117.641-24F4	8.11	5.35	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5	8.04	7.62	0.41	0.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6	7.79	2.44	0.31	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5	7.78	8.00	0.44	0.22
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7	7.74	6.88	0.86	0.00
liver, embryo E13.CNhs10524.378-3H6	7.67	4.13	0.20	0.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8	7.64	2.55	0.00	0.00
forelimb, embryo E18.CNhs11008.1520-43B5	7.61	3.70	0.62	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5	7.39	4.53	0.72	0.00
pituitary gland, neonate N00.CNhs11190.1308-22E9	7.31	3.96	0.30	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5	7.17	7.17	0.57	1.32
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6	7.11	0.00	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5	6.77	7.68	0.18	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5	6.67	10.48	0.48	0.00
forelimb, embryo E17.CNhs10598.1517-43C4	6.62	3.13	0.35	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5	6.55	6.96	0.82	0.41
whole body, embryo E18.CNhs10516.493-3B3	6.55	7.02	1.64	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5	6.35	7.59	1.24	0.15
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5	6.25	4.62	0.54	0.41
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5	6.18	7.42	0.41	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5	6.17	9.94	0.34	0.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5	6.02	6.21	0.51	0.26
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5	6.02	7.53	1.13	0.28
liver, neonate N10.CNhs11115.751-24B9	5.93	5.93	0.62	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5	5.92	5.40	1.09	0.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5	5.91	7.30	0.81	0.23
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5	5.67	7.56	0.73	0.29
liver, neonate N20.CNhs11220.823-25A3	5.56	5.81	0.25	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5	5.34	7.87	0.66	0.28
liver, neonate N07.CNhs11103.716-20H2	5.21	6.33	0.00	0.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1	5.13	0.00	0.00	0.00
corpora quadrigemina, adult.CNhs10501.16-22A4	4.94	5.09	1.35	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5	4.86	6.92	0.29	0.74
eyeball, adult.CNhs10484.31-12G4	4.84	6.52	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5	4.82	6.34	0.25	0.25
whole body, embryo E17.5.CNhs10513.490-9F9	4.82	5.98	0.77	0.19
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5	4.81	6.42	0.96	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5	4.74	7.70	0.51	0.08
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7	4.61	2.00	0.31	0.00
liver, embryo E18.CNhs10579.499-43G4	4.60	2.88	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5	4.53	6.11	0.89	0.10
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5	4.50	1.13	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5	4.49	5.05	0.56	0.56
placenta, adult pregnant day10.CNhs10472.539-13I7	4.46	0.47	0.00	0.00
pituitary gland, embryo E15.CNhs10592.427-16B9	4.43	2.48	0.18	0.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C4	4.31	0.00	0.00	0.00
liver, embryo E15.CNhs10520.433-16D7	4.26	3.45	0.41	0.00
liver, embryo E16.CNhs10523.462-17F5	4.10	3.14	0.24	0.00
pituitary gland, embryo E16.CNhs11036.449-43F6	4.10	4.10	0.18	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5	4.05	6.17	0.39	0.19
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5	3.80	7.24	0.71	0.36
liver, neonate N30.CNhs11106.1382-42D1	3.38	4.82	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5	3.19	6.92	0.35	0.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8	3.18	0.00	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5	3.16	6.31	0.53	0.26
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3	2.98	2.64	0.26	0.09
heart, embryo E11.CNhs10586.331-24E9	2.90	0.83	0.00	0.00
liver, neonate N06.CNhs11101.684-20A8	2.88	25.88	2.88	0.00
pituitary gland, embryo E17.CNhs11039.1265-44F5	2.80	2.14	0.16	0.00
liver, neonate N03.CNhs11123.1345-25G2	2.75	1.37	0.27	0.00
liver, adult pregnant day01.CNhs10466.508-5B2	2.67	3.85	0.00	0.00
liver, embryo E17.CNhs10510.481-18A3	2.55	1.78	0.25	0.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7	2.53	1.54	0.00	0.00
liver, neonate N25.CNhs11198.1368-26H1	2.51	2.69	0.18	0.00
liver, embryo E14.CNhs10594.409-16E1	2.47	2.02	0.00	0.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5	2.35	0.34	0.00	0.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3	2.34	0.26	0.00	0.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3	2.20	2.20	1.10	0.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7	2.05	0.34	0.00	0.00
whole body, neonate N06.CNhs10515.692-21D1	1.76	1.99	0.44	0.00
stomach, embryo E12.CNhs10588.356-43E3	1.74	1.42	0.00	0.00
pituitary gland, adult.CNhs10493.21-1G8	1.70	0.34	0.00	0.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6	1.69	0.68	0.00	0.00
heart, embryo E12.CNhs11015.353-12F5	1.64	0.70	0.00	0.00
whole body, neonate N01.CNhs10576.659-23C6	1.53	1.53	0.38	0.00
adrenal gland, embryo E16.CNhs11004.1254-43D6	1.52	0.00	0.00	0.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1	1.49	0.56	0.19	0.00
testis, neonate N10.CNhs11204.763-44D9	1.36	2.73	0.00	0.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7	1.35	0.09	0.00	0.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F4	1.30	1.30	0.00	0.00
adrenal gland, embryo E14.CNhs11038.406-44C5	1.21	0.87	0.00	0.00
whole body, neonate N10.CNhs10518.761-6B4	1.16	0.00	0.00	0.00
lung, embryo E12.CNhs10522.354-16G2	1.14	1.33	0.00	0.00
testis, adult.CNhs10504.57-7G5	1.13	0.00	0.00	0.00
amnion, adult pregnant day17.5.CNhs10488.583-22A8	0.99	0.00	0.00	0.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6	0.91	1.26	0.23	0.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F6	0.90	1.34	0.00	0.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6	0.88	1.18	0.29	0.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3	0.87	1.16	0.00	0.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6	0.85	0.43	0.00	0.00
adrenal gland, neonate N00.CNhs11191.1311-23C1	0.71	0.47	0.00	0.00
stomach, neonate N07.CNhs11210.718-18A9	0.66	0.74	0.08	0.00
medulla oblongata, adult.CNhs10477.17-12C2	0.64	0.96	0.00	0.00
testis, embryo E16.CNhs11033.470-26G5	0.58	0.00	0.00	0.00
testis, neonate N30.CNhs11130.1391-42E2	0.58	0.58	0.00	0.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4	0.56	0.84	0.00	0.00
stomach, neonate N03.CNhs11193.1340-24B8	0.54	0.40	0.00	0.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1	0.51	0.00	0.00	0.00
mammary gland, adult lactating day02.CNhs10480.595-22B6	0.49	0.00	0.00	0.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7	0.48	0.24	0.00	0.00
testis, neonate N20.CNhs11110.839-18H3	0.48	2.42	0.00	0.00
adrenal gland, embryo E17.CNhs11043.1263-45I1	0.46	0.23	0.00	0.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8	0.45	0.22	0.00	0.00
intestine, embryo E12.CNhs11019.1251-16I5	0.43	0.85	0.00	0.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3	0.43	0.43	0.00	0.00
gonad, embryo E13.CNhs11044.1564-45I6	0.40	0.00	0.00	0.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2	0.39	0.00	0.00	0.00
pancreas, neonate N02.CNhs11139.1539-43D8	0.36	0.36	0.00	0.00
thymus, adult.CNhs10471.38-12B5	0.32	0.32	0.00	0.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1	0.29	0.00	0.00	0.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1	0.29	0.00	0.00	0.00
accessory axillary lymph node, adult.CNhs10475.1063-29H9	0.26	1.04	0.00	0.00
testis, embryo E17.CNhs11029.486-18I5	0.26	0.26	0.00	0.00
testis, neonate N07.CNhs11222.726-26I4	0.26	0.65	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2	0.23	2.11	0.23	0.00
medulla oblongata, neonate N30.CNhs11200.1396-42A3	0.23	0.82	0.12	0.00
tongue, adult.CNhs10499.32-1B4	0.23	0.00	0.00	0.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5	0.22	0.22	0.00	0.00
heart, neonate N25.CNhs11196.1351-25D3	0.22	0.00	0.00	0.00
stomach, embryo E15.CNhs10603.1252-16G8	0.20	0.00	0.00	0.00
thymus, embryo E14.CNhs11041.402-44I4	0.20	0.41	0.00	0.00
thymus, embryo E18.CNhs10595.1273-19G4	0.20	0.00	0.00	0.00
thymus, neonate N10.CNhs11194.748-24E4	0.20	0.30	0.00	0.00
intestine, neonate N10.CNhs11098.755-23A5	0.19	0.00	0.00	0.00
kidney, embryo E14.CNhs10606.411-4I9	0.19	0.00	0.00	0.00
thymus, neonate N20.CNhs11186.820-7A2	0.19	0.19	0.00	0.00
ovary, embryo E18.CNhs11040.505-44H7	0.18	0.18	0.00	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6	0.17	0.17	0.00	0.00
testis, embryo E15.CNhs11034.443-27C5	0.17	0.17	0.00	0.00
bone (os femoris), neonate N02.CNhs11227.1985-43F5	0.16	0.00	0.00	0.00
intestine, neonate N01.CNhs11192.1322-23E9	0.16	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7	0.14	2.11	0.14	0.00
kidney, neonate N10.CNhs11206.758-6D5	0.13	0.06	0.00	0.00
heart, neonate N00.CNhs11213.639-21E3	0.12	0.00	0.00	0.00
thymus, neonate N02.CNhs11181.1541-43F8	0.12	0.00	0.00	0.00
kidney, embryo E15.CNhs10997.434-16F8	0.11	0.00	0.00	0.00
thymus, neonate N06.CNhs11197.681-26C4	0.10	0.20	0.00	0.00
Mouse Schwann, donor2.CNhs12573.11746-123F9	0.08	0.00	0.00	0.00
thymus, neonate N07.CNhs11211.713-19D3	0.08	0.23	0.00	0.00
Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7	0.00	0.00	0.00	0.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5	0.00	0.00	0.00	0.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6	0.00	0.00	0.00	0.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I3	0.00	0.00	0.00	0.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I4	0.00	0.00	0.00	0.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7	0.00	0.00	0.00	0.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8	0.00	0.23	0.00	0.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9	0.00	0.13	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8	0.00	0.26	0.00	0.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1	0.00	0.00	0.00	0.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3	0.00	0.00	0.00	0.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5	0.00	0.00	0.00	0.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2	0.00	0.00	0.00	0.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4	0.00	0.00	0.00	0.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6	0.00	0.00	0.00	0.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2	0.00	0.00	0.00	0.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9	0.00	0.00	0.00	0.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1	0.00	0.00	0.00	0.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2	0.00	0.00	0.00	0.00
GP2+ M cell, pool1.CNhs13228.11845-124H9	0.00	0.00	0.00	0.00
GP2+ M cell, pool2.CNhs13231.11846-124I1	0.00	0.00	0.00	0.00
GP2+ M cell, pool3.CNhs13240.11847-124I2	0.00	0.00	0.00	0.00
Ileum epithelium, pool1.CNhs13199.10252-104B9	0.00	0.00	0.00	0.00
Ileum epithelium, pool2.CNhs13232.10253-104C1	0.00	0.00	0.00	0.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8	0.00	0.00	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3	0.00	0.00	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6	0.00	0.00	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9	0.00	0.00	0.00	0.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5	0.00	0.00	0.00	0.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6	0.00	0.00	0.00	0.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7	0.00	0.41	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4	0.00	0.00	0.00	0.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8	0.00	0.00	0.00	0.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9	0.00	0.00	0.00	0.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3	0.00	0.00	0.00	0.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7	0.00	0.00	0.00	0.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2	0.00	0.00	0.00	0.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9	0.00	0.00	0.00	0.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1	0.00	0.00	0.00	0.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5	0.00	0.00	0.00	0.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1	0.00	0.00	0.00	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7	0.00	0.00	0.00	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7	0.00	0.00	0.00	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2	0.00	0.00	0.00	0.00
Mouse Schwann, donor1.CNhs12507.11728-123D9	0.00	0.00	0.00	0.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C4	0.00	0.68	0.00	0.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C8	0.00	0.54	0.00	0.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6	0.00	0.00	0.00	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1	0.00	0.00	0.00	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2	0.00	0.00	0.00	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3	0.00	0.00	0.00	0.00
adrenal gland, adult.CNhs10508.49-24D7	0.00	0.00	0.00	0.00
adrenal gland, embryo E18.CNhs11026.1262-18F5	0.00	0.45	0.00	0.00
adrenal gland, neonate N25.CNhs11223.1377-27I3	0.00	0.00	0.00	0.00
aorta, adult.CNhs10498.46-23H1	0.00	0.00	0.00	0.00
bone (os femoris), adult.CNhs10483.56-12G2	0.00	0.88	0.00	0.00
bone (os femoris), neonate N16.CNhs11225.1525-43A6	0.00	0.00	0.00	0.00
bone (os femoris), neonate N20.CNhs11195.1350-25C3	0.00	0.00	0.00	0.00
cecum, adult.CNhs10467.37-13H4	0.00	0.00	0.00	0.00
cerebellum, adult.CNhs10494.15-8B2	0.00	0.29	0.00	0.00
cerebellum, neonate N30.CNhs11135.1395-42I2	0.00	0.00	0.00	0.00
colon, adult.CNhs10468.36-18H7	0.00	0.00	0.00	0.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7	0.00	0.00	0.00	0.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1	0.00	0.00	0.00	0.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4	0.00	0.00	0.00	0.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1	0.00	0.20	0.00	0.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2	0.00	0.00	0.00	0.00
epididymis, adult.CNhs10490.58-23B2	0.00	0.00	0.00	0.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8	0.00	0.00	0.00	0.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2	0.00	0.00	0.00	0.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5	0.00	0.00	0.00	0.00
heart, embryo E13.CNhs11013.376-3I9	0.00	0.00	0.00	0.00
heart, embryo E14.CNhs10597.403-26D4	0.00	0.24	0.00	0.00
heart, embryo E15.CNhs11017.431-16C8	0.00	0.00	0.00	0.00
heart, embryo E16.CNhs11021.457-17C6	0.00	0.00	0.00	0.00
heart, embryo E17.CNhs11025.479-18E5	0.00	0.00	0.00	0.00
heart, embryo E18.CNhs11030.1283-20G3	0.00	0.27	0.00	0.00
heart, neonate N03.CNhs11221.1349-25I2	0.00	0.16	0.00	0.00
heart, neonate N10.CNhs11118.749-24G1	0.00	0.00	0.00	0.00
heart, neonate N16.CNhs11209.782-15G1	0.00	0.08	0.00	0.00
heart, neonate N20.CNhs11127.821-26I6	0.00	0.00	0.00	0.00
heart, neonate N30.CNhs11202.1390-42D2	0.00	0.00	0.00	0.00
intestinal mucosa, adult.CNhs10506.860-29I3	0.00	0.33	0.00	0.00
intestine, adult.CNhs10496.178-9A3	0.00	0.00	0.00	0.00
intestine, embryo E13.CNhs11010.381-16D5	0.00	0.70	0.00	0.00
intestine, embryo E15.CNhs10602.976-16D8	0.00	0.00	0.00	0.00
intestine, embryo E16.CNhs10585.463-22H4	0.00	0.00	0.00	0.00
intestine, embryo E17.CNhs10582.482-18D3	0.00	0.00	0.00	0.00
intestine, embryo E18.CNhs10526.1289-20F7	0.00	0.00	0.00	0.00
intestine, neonate N00.CNhs11126.644-26D1	0.00	0.00	0.00	0.00
intestine, neonate N06.CNhs11102.688-20B8	0.00	0.00	0.00	0.00
intestine, neonate N07.CNhs11095.720-20F2	0.00	0.00	0.00	0.00
intestine, neonate N20.CNhs11187.827-18D1	0.00	0.00	0.00	0.00
intestine, neonate N25.CNhs11121.1352-25E3	0.00	0.00	0.00	0.00
intestine, neonate N30.CNhs11131.1384-42G1	0.00	0.00	0.00	0.00
kidney, embryo E16.CNhs10584.464-22A5	0.00	0.00	0.00	0.00
kidney, embryo E17.CNhs11028.483-18I2	0.00	0.00	0.00	0.00
kidney, embryo E18.CNhs11001.1288-20C7	0.00	0.19	0.00	0.00
kidney, neonate N00.CNhs11214.646-21G7	0.00	0.00	0.00	0.00
kidney, neonate N20.CNhs11113.832-19I1	0.00	0.00	0.00	0.00
kidney, neonate N25.CNhs11122.1353-25F3	0.00	0.00	0.00	0.00
kidney, neonate N30.CNhs11203.1385-42H1	0.00	0.00	0.00	0.00
lung, adult.CNhs10474.28-22B1	0.00	0.00	0.00	0.00
lung, embryo E14.CNhs10604.404-26F8	0.00	0.00	0.00	0.00
lung, embryo E15.CNhs11020.432-17C5	0.00	0.00	0.00	0.00
lung, embryo E16.CNhs10998.458-17B6	0.00	0.00	0.00	0.00
lung, embryo E17.CNhs10605.480-44A6	0.00	0.00	0.00	0.00
lung, embryo E18.CNhs10583.1287-20I6	0.00	0.00	0.00	0.00
lung, neonate N00.CNhs11224.640-42C6	0.00	0.00	0.00	0.00
lung, neonate N06.CNhs11212.683-20E5	0.00	0.00	0.00	0.00
lung, neonate N07.CNhs11111.715-19A3	0.00	0.00	0.00	0.00
lung, neonate N10.CNhs11219.750-23E6	0.00	0.00	0.00	0.00
lung, neonate N20.CNhs11109.822-18A4	0.00	0.00	0.00	0.00
lung, neonate N25.CNhs11119.1359-25C7	0.00	0.17	0.00	0.00
lung, neonate N30.CNhs11133.1394-42H2	0.00	0.00	0.00	0.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1	0.00	0.00	0.00	0.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1	0.00	0.00	0.00	0.00
mammary gland, adult pregnant day19.CNhs10476.588-5H2	0.00	0.00	0.00	0.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7	0.00	0.00	0.00	0.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2	0.00	0.50	0.00	0.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1	0.00	0.00	0.00	0.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9	0.00	0.57	0.00	0.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4	0.00	0.00	0.00	0.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5	0.00	0.00	0.00	0.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6	0.00	0.00	0.00	0.00
ovary, adult.CNhs10507.91-2I7	0.00	0.00	0.00	0.00
ovary, neonate N00.CNhs11217.1299-22I4	0.00	0.16	0.00	0.00
oviduct, adult pregnant day01.CNhs10500.988-6G6	0.00	0.00	0.00	0.00
pancreas, adult.CNhs10486.34-16E4	0.00	0.00	0.00	0.00
pancreas, embryo E14.CNhs11012.405-44F4	0.00	0.49	0.00	0.00
pancreas, embryo E15.CNhs11042.1556-45F2	0.00	0.00	0.00	0.00
pancreas, embryo E16.CNhs11003.460-26E5	0.00	0.00	0.00	0.00
pancreas, embryo E17.CNhs10599.1558-45G3	0.00	0.00	0.00	0.00
pancreas, embryo E18.CNhs10580.1535-43I7	0.00	0.00	0.00	0.00
pancreas, neonate N00.CNhs11105.645-26G9	0.00	0.00	0.00	0.00
pancreas, neonate N01.CNhs11138.1531-43D7	0.00	0.00	0.00	0.00
pancreas, neonate N16.CNhs11136.787-43B6	0.00	0.32	0.00	0.00
pancreas, neonate N25.CNhs11094.1555-45E2	0.00	0.00	0.00	0.00
pancreas, neonate N30.CNhs11182.1548-44H5	0.00	0.00	0.00	0.00
prostate, adult.CNhs10470.859-1F8	0.00	0.00	0.00	0.00
small intestine, neonate N16.CNhs11114.790-21I1	0.00	0.00	0.00	0.00
spinal cord, adult.CNhs10505.24-13C9	0.00	0.19	0.19	0.00
spleen, adult.CNhs10465.25-2G2	0.00	0.00	0.00	0.00
spleen, embryo E16.CNhs11035.461-43C1	0.00	0.00	0.00	0.00
spleen, embryo E18.CNhs11011.1271-21F2	0.00	0.19	0.00	0.00
spleen, neonate N10.CNhs11116.752-24D1	0.00	0.19	0.00	0.00
spleen, neonate N20.CNhs11112.824-19H1	0.00	0.00	0.00	0.00
spleen, neonate N25.CNhs11099.1354-25G3	0.00	0.00	0.00	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9	0.00	0.00	0.00	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3	0.00	0.28	0.00	0.00
stomach, adult.CNhs10503.33-1H6	0.00	0.95	0.00	0.00
stomach, embryo E16.CNhs11022.459-17D4	0.00	0.11	0.00	0.00
stomach, embryo E17.CNhs11006.1035-18D5	0.00	0.00	0.00	0.00
stomach, embryo E18.CNhs10999.1286-20C6	0.00	0.00	0.00	0.00
stomach, neonate N25.CNhs11104.1355-25E4	0.00	0.00	0.00	0.00
stomach, neonate N30.CNhs11134.1386-42I1	0.00	0.00	0.00	0.00
submandibular gland, adult.CNhs10469.59-29C1	0.00	0.62	0.00	0.00
testis, embryo E13.CNhs11031.389-23F5	0.00	0.00	0.00	0.00
testis, embryo E18.CNhs11027.503-18G5	0.00	0.00	0.00	0.00
testis, neonate N00.CNhs11189.1300-22B7	0.00	0.00	0.00	0.00
thymus, embryo E15.CNhs11005.430-45I2	0.00	0.10	0.00	0.00
thymus, embryo E16.CNhs11002.456-26C5	0.00	0.00	0.00	0.00
thymus, embryo E17.CNhs10581.478-18C1	0.00	0.18	0.00	0.00
thymus, neonate N03.CNhs11137.2104-43C7	0.00	0.00	0.00	0.00
thymus, neonate N25.CNhs11125.1362-25G7	0.00	0.29	0.00	0.00
thymus, neonate N30.CNhs11132.1393-42G2	0.00	0.00	0.12	0.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3	0.00	0.00	0.00	0.00
urinary bladder, adult.CNhs10481.879-12E4	0.00	0.00	0.00	0.00
uterus, adult pregnant day19.CNhs10497.590-15F5	0.00	0.00	0.00	0.00
uterus, adult.CNhs10509.92-27E5	0.00	0.00	0.00	0.00
vagina, adult.CNhs10502.89-27D5	0.00	0.00	0.00	0.00
vesicular gland, adult.CNhs10491.51-27F8	0.00	0.00	0.00	0.00

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p1@Lhx2
p2@Lhx2
p3@Lhx2
p4@Lhx2

• Click each plot point to find sample in table

ENCODE TF ChIP-seq peak enrichment analysis Analyst: Erik Arner <br>Summary: For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><br><br>link to source dataset.<br>data

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No analysis results for this cluster

Details<b>Summary:</b>It includes sequences from the international sequence collaboration, Swiss-Prot, and RefSeq. The RefSeq subset of this file is also available as gene2refseq.<br><br>links to source dataset.<br>human <br>mouse

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GeneID:	16870
LocusTag:	RP23-399K8.3
chromosome:	2
map location:	2 B, 2, 2 B;;2
type of gene:	protein-coding
Symbol from nomenclature authority:	Lhx2
Full name from nomenclature authority:	LIM homeobox protein 2
Nomenclature status:	O
Other designations:	LIM homeo box protein 2, LIM/homeobox protein Lhx2, homeobox protein LH-2, LIM homeo box protein 2;;LIM/homeobox protein Lhx2;;homeobox protein LH-2
Modification date:	15.01.2012