EntrezGene:19288

Symbol:	Ptx3
Description:	pentraxin related gene
Synonyms:	AI607804, TSG-14
Species:	Mouse (Mus musculus)
Xrefs:	ExpandEntrezGene:19288 MGI:104641 Ensembl:ENSMUSG00000027832
Associated motifs:	NA
Transcripton Factor?:	No

TSS regions

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Mm9::chr3:66023831..66023849,+	p2@Ptx3
Mm9::chr3:66023864..66023873,+	p3@Ptx3
Mm9::chr3:66023882..66023887,+	p5@Ptx3
Mm9::chr3:66023891..66023910,+	p1@Ptx3
TSS peak ID	Short_description

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TSS expression

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Sample	p1@Ptx3	p2@Ptx3	p3@Ptx3	p5@Ptx3

Sample	p1@Ptx3	p2@Ptx3	p3@Ptx3	p5@Ptx3
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1	401.66	124.48	29.52	6.42
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7	289.51	18.52	8.36	4.43
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6	113.77	7.11	7.11	0.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8	86.63	28.03	5.10	0.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3	43.12	15.59	3.38	1.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7	40.73	11.08	3.41	1.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8	29.68	10.95	3.53	0.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1	26.24	5.15	1.29	0.26
Mouse Microglia, donor1.CNhs12629.11718-123C8	24.87	4.79	1.50	0.60
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8	24.17	7.25	1.76	0.66
Mouse Astrocytes, donor3.CNhs12107.11633-122C4	18.69	15.81	1.44	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7	16.65	0.90	0.00	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2	14.92	1.42	0.00	0.00
whole body, embryo E12.CNhs10587.857-27C9	9.58	5.59	1.20	0.40
Mouse Microglia, donor2.CNhs12634.11736-123E8	9.22	1.15	0.38	0.38
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7	8.90	0.99	0.00	0.00
Mouse Schwann, donor2.CNhs12573.11746-123F9	8.84	1.06	0.30	0.45
forelimb, embryo E12.CNhs10600.359-14H2	8.51	5.11	0.76	0.00
forelimb, embryo E13.CNhs10589.384-1E2	8.27	10.56	0.88	0.53
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2	7.96	9.20	1.82	0.58
forelimb, embryo E14.CNhs10577.413-26A8	7.67	7.23	1.32	0.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6	7.45	1.36	1.69	0.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5	7.29	8.24	1.89	0.27
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2	7.23	9.92	0.86	0.24
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1	7.11	1.78	1.78	1.78
forelimb, embryo E15.CNhs11007.437-20E7	6.95	5.00	0.56	0.56
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3	6.81	5.06	1.56	0.19
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9	6.73	6.94	1.26	0.21
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5	6.70	0.52	0.00	0.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6	6.43	8.27	0.00	0.00
forelimb, embryo E17.CNhs10598.1517-43C4	5.92	3.83	0.00	0.35
Mouse Schwann, donor1.CNhs12507.11728-123D9	5.91	0.08	0.08	0.00
whole body, neonate N01.CNhs10576.659-23C6	5.74	1.34	0.19	0.00
whole body, embryo E13.CNhs10512.372-23H2	5.46	5.29	1.20	0.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5	5.29	6.12	0.73	0.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4	5.14	5.28	0.53	0.13
Mouse Astrocytes, donor2.CNhs12078.11552-120C4	5.04	5.04	1.12	0.14
Mouse Granule cells, donor2.CNhs12357.11731-123E3	4.76	7.93	1.06	0.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7	4.69	9.39	3.91	0.00
uterus, adult pregnant day19.CNhs10497.590-15F5	4.69	0.56	0.94	0.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8	4.53	1.01	0.88	0.25
bone (os femoris), neonate N02.CNhs11227.1985-43F5	4.37	2.91	0.32	0.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9	4.18	0.00	0.26	0.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9	4.06	1.42	0.41	0.20
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4	4.03	4.03	1.10	0.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1	4.01	0.57	0.86	0.29
forelimb, embryo E18.CNhs11008.1520-43B5	3.91	3.91	0.62	0.41
hippocampus, neonate N00.CNhs11228.627-43G1	3.91	3.60	0.51	0.21
whole body, embryo E14.5.CNhs10578.420-27D2	3.89	1.70	0.49	0.24
Mouse Granule cells, donor3.CNhs12108.11636-122C7	3.80	4.44	1.27	0.00
kidney, embryo E14.CNhs10606.411-4I9	3.79	1.33	0.00	0.00
Mouse Granule cells, donor1.CNhs12131.11713-123C3	3.64	4.86	1.21	0.00
lung, embryo E12.CNhs10522.354-16G2	3.22	1.52	0.19	0.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8	3.13	7.29	1.04	0.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2	3.05	6.10	1.31	0.65
heart, embryo E15.CNhs11017.431-16C8	2.95	0.79	0.59	0.00
lung, neonate N00.CNhs11224.640-42C6	2.73	0.39	0.59	0.00
bone (os femoris), adult.CNhs10483.56-12G2	2.65	0.00	0.00	0.00
heart, embryo E14.CNhs10597.403-26D4	2.60	1.42	0.24	0.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2	2.58	0.50	0.00	0.10
eyeball, embryo E14.CNhs10521.399-16E2	2.53	3.68	0.46	0.46
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2	2.49	1.74	0.12	0.12
eyeball, embryo E12.CNhs11016.345-16C6	2.34	3.90	0.39	0.13
whole body, embryo E18.CNhs10516.493-3B3	2.34	1.40	0.47	0.23
heart, embryo E11.CNhs10586.331-24E9	2.28	0.62	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5	2.27	1.52	0.00	0.00
adrenal gland, embryo E14.CNhs11038.406-44C5	2.26	0.52	0.17	0.00
kidney, embryo E16.CNhs10584.464-22A5	2.25	1.13	1.13	0.00
bone (os femoris), neonate N16.CNhs11225.1525-43A6	2.21	1.33	0.66	0.22
whole body, neonate N06.CNhs10515.692-21D1	2.21	0.66	0.88	0.00
pituitary gland, embryo E12.CNhs11018.346-16E6	2.16	2.88	0.54	0.36
whole body, neonate N00.CNhs10525.657-19C2	2.15	1.50	0.64	0.00
testis, embryo E16.CNhs11033.470-26G5	2.14	0.58	0.39	0.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8	2.11	0.00	0.00	0.00
heart, embryo E12.CNhs11015.353-12F5	2.11	1.64	0.47	0.23
thymus, embryo E14.CNhs11041.402-44I4	2.03	0.81	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5	2.03	2.47	0.15	0.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2	2.02	0.76	0.25	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5	2.01	1.28	0.55	0.00
heart, neonate N00.CNhs11213.639-21E3	1.99	1.17	0.00	0.00
eyeball, embryo E15.CNhs10593.426-16C9	1.98	1.98	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5	1.91	0.95	0.48	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5	1.91	0.72	0.00	0.00
heart, embryo E18.CNhs11030.1283-20G3	1.88	0.80	0.27	0.27
whole body, neonate N10.CNhs10518.761-6B4	1.85	1.39	0.23	0.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1	1.80	0.00	0.00	0.00
lung, neonate N07.CNhs11111.715-19A3	1.77	1.33	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5	1.77	2.13	0.00	0.35
pancreas, embryo E14.CNhs11012.405-44F4	1.70	1.46	0.24	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5	1.70	0.46	0.31	0.00
intestine, embryo E15.CNhs10602.976-16D8	1.68	1.03	0.39	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5	1.68	0.56	0.00	0.00
lung, embryo E18.CNhs10583.1287-20I6	1.67	0.48	0.48	0.00
skin, neonate N06.CNhs11097.693-20I5	1.67	0.48	0.36	0.00
pituitary gland, embryo E17.CNhs11039.1265-44F5	1.65	1.48	0.00	0.00
heart, embryo E17.CNhs11025.479-18E5	1.63	1.16	0.70	0.00
skin, neonate N03.CNhs11215.662-22H3	1.63	0.90	0.24	0.06
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5	1.60	1.09	0.19	0.06
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5	1.56	1.11	0.22	0.22
heart, neonate N25.CNhs11196.1351-25D3	1.54	0.22	0.00	0.00
whole body, embryo E17.5.CNhs10513.490-9F9	1.54	1.54	0.77	0.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1	1.53	0.71	0.20	0.10
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5	1.51	1.51	0.94	0.19
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5	1.49	1.77	0.00	0.00
heart, neonate N03.CNhs11221.1349-25I2	1.48	0.99	0.33	0.16
skin, neonate N00.CNhs11124.650-25G4	1.45	1.13	0.48	0.16
heart, embryo E13.CNhs11013.376-3I9	1.44	1.08	0.54	0.00
kidney, embryo E17.CNhs11028.483-18I2	1.43	1.43	0.00	0.20
pituitary gland, embryo E13.CNhs11009.370-44C7	1.42	1.94	0.13	0.00
stomach, embryo E12.CNhs10588.356-43E3	1.42	0.47	0.16	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5	1.37	1.71	0.34	0.34
whole body, embryo E11.CNhs11014.324-5I8	1.35	1.87	0.31	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5	1.32	1.05	0.53	0.00
heart, neonate N16.CNhs11209.782-15G1	1.30	0.65	0.16	0.16
pancreas, neonate N00.CNhs11105.645-26G9	1.29	0.26	0.26	0.00
whole body, embryo E16.CNhs10514.453-14F2	1.29	1.10	0.18	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5	1.27	3.55	0.76	0.00
whole body, embryo E14.CNhs10519.395-14B1	1.26	1.05	0.00	0.00
pituitary gland, embryo E16.CNhs11036.449-43F6	1.25	0.89	0.36	0.00
whole body, embryo E17.CNhs10517.475-3I5	1.25	2.75	0.00	0.00
thymus, embryo E15.CNhs11005.430-45I2	1.23	0.62	0.10	0.00
stomach, embryo E15.CNhs10603.1252-16G8	1.22	0.61	0.20	0.00
stomach, neonate N03.CNhs11193.1340-24B8	1.21	0.13	0.27	0.13
intestine, neonate N07.CNhs11095.720-20F2	1.19	0.80	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5	1.18	1.47	0.29	0.15
heart, neonate N20.CNhs11127.821-26I6	1.17	0.29	0.00	0.00
kidney, embryo E18.CNhs11001.1288-20C7	1.16	0.78	0.00	0.00
testis, embryo E17.CNhs11029.486-18I5	1.16	0.65	0.39	0.00
skin, neonate N10.CNhs11108.762-6C4	1.15	0.33	0.00	0.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5	1.14	0.00	0.00	0.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6	1.13	2.82	0.14	0.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3	1.10	0.18	0.00	0.00
lung, neonate N06.CNhs11212.683-20E5	1.10	0.79	0.00	0.16
eyeball, neonate N00.CNhs11207.633-15C6	1.09	0.61	0.20	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5	1.09	1.61	0.34	0.11
heart, embryo E16.CNhs11021.457-17C6	1.08	0.62	0.00	0.00
intestine, embryo E12.CNhs11019.1251-16I5	1.07	0.64	0.00	0.00
pancreas, neonate N02.CNhs11139.1539-43D8	1.07	0.00	0.00	0.00
vagina, adult.CNhs10502.89-27D5	1.07	0.21	0.21	0.00
pancreas, neonate N25.CNhs11094.1555-45E2	1.05	0.00	0.00	0.00
lung, neonate N25.CNhs11119.1359-25C7	1.04	0.69	0.00	0.00
testis, neonate N07.CNhs11222.726-26I4	1.04	0.39	0.26	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5	1.04	1.39	0.23	0.00
pancreas, neonate N30.CNhs11182.1548-44H5	1.03	0.00	0.00	0.00
spleen, embryo E16.CNhs11035.461-43C1	1.03	0.41	0.21	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5	1.03	1.24	0.41	0.21
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4	1.02	0.00	0.00	0.00
intestine, embryo E16.CNhs10585.463-22H4	1.01	0.20	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5	0.99	1.38	0.20	0.00
bone (os femoris), neonate N20.CNhs11195.1350-25C3	0.97	0.97	0.00	0.48
intestine, neonate N10.CNhs11098.755-23A5	0.97	0.19	0.19	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3	0.97	0.00	0.28	0.00
lung, neonate N10.CNhs11219.750-23E6	0.96	0.32	0.16	0.00
intestine, neonate N00.CNhs11126.644-26D1	0.95	0.00	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5	0.94	0.94	0.19	0.19
kidney, neonate N00.CNhs11214.646-21G7	0.91	1.12	0.07	0.00
pancreas, embryo E15.CNhs11042.1556-45F2	0.91	0.00	0.30	0.00
intestine, embryo E17.CNhs10582.482-18D3	0.89	0.89	0.22	0.00
pancreas, embryo E17.CNhs10599.1558-45G3	0.89	0.59	0.00	0.00
corpus striatum, neonate N00.CNhs11226.630-43F1	0.88	1.51	0.13	0.13
lung, neonate N30.CNhs11133.1394-42H2	0.87	0.00	0.00	0.29
stomach, embryo E17.CNhs11006.1035-18D5	0.84	0.21	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5	0.84	1.78	0.09	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5	0.83	1.66	0.12	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5	0.82	1.65	0.00	0.00
kidney, embryo E15.CNhs10997.434-16F8	0.80	0.91	0.46	0.11
stomach, neonate N25.CNhs11104.1355-25E4	0.79	0.00	0.00	0.00
eyeball, neonate N01.CNhs11140.1532-43E7	0.77	0.64	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5	0.76	1.10	0.17	0.00
eyeball, neonate N02.CNhs11205.1551-44G8	0.75	0.75	0.09	0.00
pancreas, embryo E16.CNhs11003.460-26E5	0.75	0.19	0.00	0.00
spleen, embryo E18.CNhs11011.1271-21F2	0.74	1.11	0.19	0.00
stomach, neonate N07.CNhs11210.718-18A9	0.74	0.66	0.08	0.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7	0.72	0.00	0.00	0.00
intestine, embryo E13.CNhs11010.381-16D5	0.70	0.70	0.70	0.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C4	0.68	0.00	0.00	0.68
pituitary gland, adult.CNhs10493.21-1G8	0.68	0.00	0.00	0.00
testis, embryo E18.CNhs11027.503-18G5	0.68	1.52	0.00	0.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5	0.67	0.00	0.00	0.00
lung, neonate N20.CNhs11109.822-18A4	0.66	0.16	0.00	0.00
eyeball, embryo E17.CNhs11023.1261-18D4	0.60	1.05	0.30	0.00
testis, neonate N00.CNhs11189.1300-22B7	0.59	0.12	0.12	0.12
small intestine, neonate N16.CNhs11114.790-21I1	0.58	0.00	0.29	0.29
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5	0.58	1.35	0.19	0.19
intestine, embryo E18.CNhs10526.1289-20F7	0.57	0.76	0.00	0.19
lung, adult.CNhs10474.28-22B1	0.55	0.00	0.18	0.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1	0.54	0.00	0.00	0.00
thymus, embryo E17.CNhs10581.478-18C1	0.54	0.36	0.00	0.00
accessory axillary lymph node, adult.CNhs10475.1063-29H9	0.52	0.26	0.00	0.00
eyeball, neonate N16.CNhs11188.777-19A2	0.52	0.52	0.00	0.00
lung, embryo E15.CNhs11020.432-17C5	0.51	0.51	0.00	0.00
intestine, neonate N06.CNhs11102.688-20B8	0.50	0.75	0.00	0.00
heart, neonate N10.CNhs11118.749-24G1	0.49	0.82	0.16	0.00
intestine, neonate N01.CNhs11192.1322-23E9	0.49	0.16	0.00	0.00
lung, embryo E14.CNhs10604.404-26F8	0.49	0.33	0.16	0.00
ovary, neonate N00.CNhs11217.1299-22I4	0.49	0.49	0.00	0.00
adrenal gland, neonate N00.CNhs11191.1311-23C1	0.47	0.00	0.00	0.12
adrenal gland, embryo E17.CNhs11043.1263-45I1	0.46	0.23	0.00	0.00
kidney, neonate N10.CNhs11206.758-6D5	0.44	0.38	0.00	0.13
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6	0.43	0.57	0.00	0.14
ovary, adult.CNhs10507.91-2I7	0.43	0.14	0.00	0.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7	0.42	0.14	0.00	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9	0.42	0.28	0.00	0.00
testis, neonate N10.CNhs11204.763-44D9	0.42	0.42	0.21	0.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5	0.41	1.23	0.00	0.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4	0.40	0.00	0.00	0.40
adrenal gland, neonate N25.CNhs11223.1377-27I3	0.38	0.13	0.00	0.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1	0.37	0.37	0.19	0.00
kidney, neonate N30.CNhs11203.1385-42H1	0.37	0.00	0.12	0.00
liver, neonate N07.CNhs11103.716-20H2	0.37	0.00	0.00	0.00
spinal cord, adult.CNhs10505.24-13C9	0.37	0.00	0.00	0.00
ovary, embryo E18.CNhs11040.505-44H7	0.36	0.18	0.00	0.00
pancreas, neonate N01.CNhs11138.1531-43D7	0.36	0.00	0.00	0.00
cortex, adult.CNhs10473.12-14D5	0.35	0.00	0.00	0.00
lung, embryo E17.CNhs10605.480-44A6	0.34	0.00	0.00	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6	0.34	0.00	0.00	0.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7	0.34	0.34	0.00	0.00
intestinal mucosa, adult.CNhs10506.860-29I3	0.33	0.00	0.00	0.00
oviduct, adult pregnant day01.CNhs10500.988-6G6	0.33	0.33	0.00	0.00
testis, embryo E15.CNhs11034.443-27C5	0.33	0.50	0.17	0.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1	0.32	0.00	0.00	0.00
stomach, embryo E16.CNhs11022.459-17D4	0.32	0.32	0.22	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5	0.32	1.28	0.32	0.00
liver, neonate N10.CNhs11115.751-24B9	0.31	0.31	0.00	0.00
pancreas, embryo E18.CNhs10580.1535-43I7	0.31	0.00	0.00	0.00
testis, embryo E13.CNhs11031.389-23F5	0.30	0.15	0.15	0.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1	0.29	0.00	0.00	0.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6	0.29	0.00	0.00	0.00
heart, neonate N30.CNhs11202.1390-42D2	0.27	0.27	0.13	0.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3	0.26	0.00	0.00	0.00
cortex, neonate N30.CNhs11107.1392-42F2	0.26	0.00	0.00	0.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2	0.26	0.00	0.00	0.00
liver, embryo E17.CNhs10510.481-18A3	0.25	0.00	0.00	0.00
liver, neonate N20.CNhs11220.823-25A3	0.25	0.00	0.00	0.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7	0.24	0.12	0.00	0.00
lung, embryo E16.CNhs10998.458-17B6	0.23	0.47	0.23	0.00
placenta, adult pregnant day10.CNhs10472.539-13I7	0.23	0.23	0.23	0.00
tongue, adult.CNhs10499.32-1B4	0.23	0.23	0.00	0.00
GP2+ M cell, pool3.CNhs13240.11847-124I2	0.22	0.00	0.00	0.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5	0.22	0.22	0.22	0.00
intestine, neonate N25.CNhs11121.1352-25E3	0.22	0.00	0.00	0.00
gonad, embryo E13.CNhs11044.1564-45I6	0.20	1.19	0.40	0.00
thymus, embryo E18.CNhs10595.1273-19G4	0.20	0.20	0.00	0.00
thymus, neonate N06.CNhs11197.681-26C4	0.20	0.00	0.00	0.00
urinary bladder, adult.CNhs10481.879-12E4	0.19	0.00	0.00	0.00
pituitary gland, embryo E15.CNhs10592.427-16B9	0.18	1.06	0.00	0.18
liver, embryo E12.CNhs10601.355-15F8	0.17	0.33	0.17	0.00
kidney, neonate N25.CNhs11122.1353-25F3	0.16	0.00	0.16	0.00
skin, adult.CNhs10492.30-1C3	0.16	0.00	0.00	0.00
kidney, neonate N20.CNhs11113.832-19I1	0.15	0.30	0.00	0.00
aorta, adult.CNhs10498.46-23H1	0.14	0.00	0.00	0.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3	0.13	0.00	0.00	0.00
medulla oblongata, neonate N30.CNhs11200.1396-42A3	0.12	0.00	0.00	0.00
thymus, neonate N02.CNhs11181.1541-43F8	0.12	0.00	0.00	0.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6	0.11	0.11	0.00	0.00
Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7	0.00	0.00	0.00	0.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5	0.00	0.00	0.00	0.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6	0.00	0.00	0.00	0.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I3	0.00	0.00	0.00	0.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I4	0.00	0.00	0.00	0.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7	0.00	0.00	0.00	0.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8	0.00	0.00	0.00	0.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4	0.00	0.00	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8	0.00	0.00	0.00	0.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1	0.00	0.00	0.00	0.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3	0.00	0.00	0.00	0.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5	0.00	0.00	0.00	0.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2	0.00	0.00	0.00	0.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4	0.00	0.00	0.00	0.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6	0.00	0.00	0.00	0.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1	0.00	0.00	0.00	0.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2	0.00	0.00	0.00	0.00
GP2+ M cell, pool1.CNhs13228.11845-124H9	0.00	0.00	0.00	0.00
GP2+ M cell, pool2.CNhs13231.11846-124I1	0.00	0.00	0.00	0.00
Ileum epithelium, pool1.CNhs13199.10252-104B9	0.00	0.00	0.00	0.00
Ileum epithelium, pool2.CNhs13232.10253-104C1	0.00	0.00	0.00	0.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8	0.00	0.00	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3	0.00	0.00	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6	0.00	0.00	0.00	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9	0.00	0.00	0.00	0.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5	0.00	0.00	0.00	0.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6	0.00	0.00	0.00	0.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2	0.00	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4	0.00	0.00	0.00	0.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2	0.00	0.00	0.00	0.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9	0.00	0.00	0.00	0.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1	0.00	0.00	0.00	0.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3	0.00	0.00	0.00	0.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7	0.00	0.15	0.00	0.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4	0.00	0.00	0.00	0.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5	0.00	0.00	0.00	0.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6	0.00	0.15	0.00	0.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3	0.00	0.00	0.00	0.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7	0.00	0.00	0.00	0.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C8	0.00	0.00	0.00	0.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F4	0.00	0.00	0.00	0.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F6	0.00	0.00	0.00	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1	0.00	0.00	0.00	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2	0.00	0.00	0.00	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3	0.00	0.00	0.00	0.00
adrenal gland, adult.CNhs10508.49-24D7	0.00	0.00	0.00	0.00
adrenal gland, embryo E16.CNhs11004.1254-43D6	0.00	0.30	0.00	0.00
adrenal gland, embryo E18.CNhs11026.1262-18F5	0.00	0.30	0.00	0.00
amnion, adult pregnant day17.5.CNhs10488.583-22A8	0.00	0.00	0.00	0.00
cecum, adult.CNhs10467.37-13H4	0.00	0.00	0.00	0.00
cerebellum, adult.CNhs10494.15-8B2	0.00	0.00	0.00	0.00
cerebellum, neonate N30.CNhs11135.1395-42I2	0.00	0.00	0.00	0.00
colon, adult.CNhs10468.36-18H7	0.00	0.00	0.00	0.00
corpora quadrigemina, adult.CNhs10501.16-22A4	0.00	0.00	0.15	0.00
corpus striatum, adult.CNhs10487.19-21D8	0.00	0.00	0.46	0.00
diencephalon, adult.CNhs10482.20-12F2	0.00	0.00	0.00	0.00
diencephalon, neonate N30.CNhs11201.1388-42B2	0.00	0.16	0.00	0.00
epididymis, adult.CNhs10490.58-23B2	0.00	0.00	0.00	0.00
eyeball, adult.CNhs10484.31-12G4	0.00	0.21	0.00	0.00
forelimb, embryo E11.CNhs10596.335-25E2	0.00	0.65	0.00	0.00
hippocampus, adult.CNhs10478.13-16E8	0.00	0.21	0.00	0.00
intestine, adult.CNhs10496.178-9A3	0.00	0.00	0.00	0.00
intestine, neonate N20.CNhs11187.827-18D1	0.00	0.00	0.00	0.00
intestine, neonate N30.CNhs11131.1384-42G1	0.00	0.00	0.00	0.00
liver, adult pregnant day01.CNhs10466.508-5B2	0.00	0.00	0.30	0.00
liver, embryo E13.CNhs10524.378-3H6	0.00	0.00	0.20	0.00
liver, embryo E14.CNhs10594.409-16E1	0.00	0.00	0.00	0.00
liver, embryo E15.CNhs10520.433-16D7	0.00	0.00	0.00	0.00
liver, embryo E16.CNhs10523.462-17F5	0.00	0.00	0.00	0.00
liver, embryo E18.CNhs10579.499-43G4	0.00	0.00	0.00	0.00
liver, neonate N00.CNhs11117.641-24F4	0.00	0.00	0.00	0.00
liver, neonate N03.CNhs11123.1345-25G2	0.00	0.27	0.00	0.00
liver, neonate N06.CNhs11101.684-20A8	0.00	0.00	0.00	0.00
liver, neonate N25.CNhs11198.1368-26H1	0.00	0.00	0.00	0.00
liver, neonate N30.CNhs11106.1382-42D1	0.00	0.00	0.00	0.48
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1	0.00	0.00	0.00	0.00
mammary gland, adult lactating day02.CNhs10480.595-22B6	0.00	0.00	0.00	0.00
mammary gland, adult pregnant day19.CNhs10476.588-5H2	0.00	0.28	0.28	0.00
medulla oblongata, adult.CNhs10477.17-12C2	0.00	0.00	0.00	0.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2	0.00	0.00	0.00	0.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3	0.00	0.43	0.00	0.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8	0.00	0.00	0.00	0.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9	0.00	0.00	0.00	0.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5	0.00	0.00	0.00	0.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6	0.00	0.00	0.00	0.00
olfactory brain, adult.CNhs10489.18-22I9	0.00	0.00	0.00	0.00
pancreas, adult.CNhs10486.34-16E4	0.00	0.00	0.00	0.00
pancreas, neonate N16.CNhs11136.787-43B6	0.00	0.00	0.32	0.00
pituitary gland, embryo E14.CNhs11037.398-44A5	0.00	0.43	0.21	0.00
pituitary gland, neonate N00.CNhs11190.1308-22E9	0.00	0.30	0.30	0.00
placenta, adult pregnant day17.CNhs10464.577-18G3	0.00	0.00	0.00	0.00
prostate, adult.CNhs10470.859-1F8	0.00	0.00	0.00	0.00
spleen, adult.CNhs10465.25-2G2	0.00	0.00	0.00	0.00
spleen, neonate N10.CNhs11116.752-24D1	0.00	0.00	0.00	0.00
spleen, neonate N20.CNhs11112.824-19H1	0.00	0.00	0.00	0.00
spleen, neonate N25.CNhs11099.1354-25G3	0.00	0.00	0.00	0.00
stomach, adult.CNhs10503.33-1H6	0.00	0.00	0.00	0.00
stomach, embryo E18.CNhs10999.1286-20C6	0.00	0.22	0.00	0.00
stomach, neonate N30.CNhs11134.1386-42I1	0.00	0.13	0.00	0.00
submandibular gland, adult.CNhs10469.59-29C1	0.00	0.00	0.00	0.00
testis, adult.CNhs10504.57-7G5	0.00	0.00	0.00	0.00
testis, neonate N20.CNhs11110.839-18H3	0.00	0.00	0.00	0.00
testis, neonate N30.CNhs11130.1391-42E2	0.00	0.00	0.00	0.00
thymus, adult.CNhs10471.38-12B5	0.00	0.00	0.00	0.00
thymus, embryo E16.CNhs11002.456-26C5	0.00	0.13	0.00	0.00
thymus, neonate N03.CNhs11137.2104-43C7	0.00	0.00	0.00	0.00
thymus, neonate N07.CNhs11211.713-19D3	0.00	0.00	0.00	0.00
thymus, neonate N10.CNhs11194.748-24E4	0.00	0.00	0.00	0.00
thymus, neonate N20.CNhs11186.820-7A2	0.00	0.00	0.00	0.00
thymus, neonate N25.CNhs11125.1362-25G7	0.00	0.00	0.00	0.00
thymus, neonate N30.CNhs11132.1393-42G2	0.00	0.00	0.00	0.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3	0.00	0.00	0.00	0.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7	0.00	0.00	0.00	0.00
uterus, adult.CNhs10509.92-27E5	0.00	0.18	0.18	0.00
vesicular gland, adult.CNhs10491.51-27F8	0.00	0.00	0.00	0.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1	0.00	0.00	0.00	0.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2	0.00	0.46	0.00	0.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3	0.00	0.00	0.00	0.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4	0.00	0.00	0.00	0.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5	0.00	0.00	0.00	0.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6	0.00	0.00	0.00	0.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7	0.00	0.00	0.00	0.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8	0.00	0.45	0.00	0.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9	0.00	0.00	0.00	0.00

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p1@Ptx3
p2@Ptx3
p3@Ptx3
p5@Ptx3

• Click each plot point to find sample in table

ENCODE TF ChIP-seq peak enrichment analysis Analyst: Erik Arner <br>Summary: For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><br><br>link to source dataset.<br>data

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No analysis results for this cluster

Details<b>Summary:</b>It includes sequences from the international sequence collaboration, Swiss-Prot, and RefSeq. The RefSeq subset of this file is also available as gene2refseq.<br><br>links to source dataset.<br>human <br>mouse

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GeneID:	19288
LocusTag:	-
chromosome:	3
map location:	3 E1, 3 33.8 cM, 3 E1;;3 33.8 cM
type of gene:	protein-coding
Symbol from nomenclature authority:	Ptx3
Full name from nomenclature authority:	pentraxin related gene
Nomenclature status:	O
Other designations:	pentaxin related, pentaxin-related protein PTX3, pentraxin 3, pentraxin-related protein PTX3, tumor necrosis factor-inducible gene 14 protein, pentaxin related;;pentaxin-related protein PTX3;;pentraxin 3;;pentraxin-related protein PTX3;;tumor necrosis factor-inducible gene 14 protein
Modification date:	16.12.2011