EntrezGene:77809

Symbol:	Lrrc42
Description:	leucine rich repeat containing 42
Synonyms:	A930011F22Rik, AA536996
Species:	Mouse (Mus musculus)
Xrefs:	ExpandEntrezGene:77809 MGI:1925059 Ensembl:ENSMUSG00000028617 Vega:OTTMUSG00000008593
Associated motifs:	NA
Transcripton Factor?:	No

TSS regions

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Mm9::chr4:106925932..106925961,-	p2@Lrrc42
Mm9::chr4:106925968..106925982,-	p3@Lrrc42
Mm9::chr4:106925993..106926011,-	p4@Lrrc42
Mm9::chr4:106926046..106926096,-	p1@Lrrc42
Mm9::chr4:106926118..106926129,-	p8@Lrrc42
TSS peak ID	Short_description

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TSS expression

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Sample	p1@Lrrc42	p2@Lrrc42	p3@Lrrc42	p4@Lrrc42

Sample	p1@Lrrc42	p2@Lrrc42	p3@Lrrc42	p4@Lrrc42
stomach, neonate N30.CNhs11134.1386-42I1	48.22	39.01	14.39	1.43
testis, neonate N10.CNhs11204.763-44D9	42.57	4.30	3.77	2.31
testis, embryo E17.CNhs11029.486-18I5	35.13	1.29	2.20	1.68
testis, neonate N20.CNhs11110.839-18H3	33.34	1.69	2.17	0.72
testis, embryo E16.CNhs11033.470-26G5	30.92	2.53	2.14	2.33
thymus, neonate N02.CNhs11181.1541-43F8	30.65	3.61	2.52	1.20
testis, adult.CNhs10504.57-7G5	29.88	2.25	0.56	0.56
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3	29.55	1.75	3.31	2.14
thymus, neonate N20.CNhs11186.820-7A2	29.14	5.56	3.41	2.53
thymus, neonate N06.CNhs11197.681-26C4	28.98	3.13	2.42	1.51
thymus, neonate N10.CNhs11194.748-24E4	28.53	3.63	2.62	1.61
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6	27.75	3.18	0.91	0.91
testis, embryo E15.CNhs11034.443-27C5	27.63	1.65	1.32	1.99
thymus, neonate N30.CNhs11132.1393-42G2	27.47	4.32	3.51	2.10
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8	27.46	1.98	2.42	2.42
thymus, neonate N25.CNhs11125.1362-25G7	27.32	4.71	3.46	1.64
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2	27.25	1.31	0.87	2.18
eyeball, embryo E14.CNhs10521.399-16E2	25.98	7.82	8.05	2.53
testis, neonate N07.CNhs11222.726-26I4	25.91	1.17	1.82	2.60
Mouse Astrocytes, donor3.CNhs12107.11633-122C4	25.88	1.44	4.31	0.00
GP2+ M cell, pool1.CNhs13228.11845-124H9	25.84	5.17	2.87	1.15
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3	25.72	1.04	1.82	1.04
pituitary gland, embryo E14.CNhs11037.398-44A5	25.51	4.50	4.07	4.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2	25.28	1.40	0.23	0.00
thymus, neonate N07.CNhs11211.713-19D3	25.22	3.20	3.35	1.68
thymus, embryo E17.CNhs10581.478-18C1	25.06	3.22	1.61	1.43
Mouse Astrocytes, donor2.CNhs12078.11552-120C4	24.36	1.26	1.40	2.10
whole body, embryo E11.CNhs11014.324-5I8	24.18	3.01	3.01	2.18
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7	24.10	1.48	3.28	0.82
ovary, embryo E18.CNhs11040.505-44H7	24.04	2.14	1.07	0.89
pituitary gland, embryo E13.CNhs11009.370-44C7	23.93	5.56	5.43	3.10
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1	23.77	0.32	0.40	0.32
liver, neonate N06.CNhs11101.684-20A8	23.00	0.00	0.00	1.44
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8	22.93	0.00	2.55	0.00
testis, neonate N30.CNhs11130.1391-42E2	22.75	1.73	0.58	1.15
GP2+ M cell, pool2.CNhs13231.11846-124I1	22.40	5.60	0.43	0.00
eyeball, embryo E15.CNhs10593.426-16C9	22.33	8.28	7.74	4.14
thymus, embryo E18.CNhs10595.1273-19G4	22.25	3.38	2.58	1.59
lung, embryo E12.CNhs10522.354-16G2	22.17	3.22	3.60	2.08
thymus, neonate N03.CNhs11137.2104-43C7	22.15	4.28	2.51	2.36
pituitary gland, embryo E16.CNhs11036.449-43F6	21.94	3.21	3.92	1.25
testis, embryo E18.CNhs11027.503-18G5	21.80	1.18	1.69	1.35
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6	21.69	3.73	3.73	2.71
testis, embryo E13.CNhs11031.389-23F5	21.53	1.64	1.20	0.75
thymus, adult.CNhs10471.38-12B5	21.49	2.53	2.84	1.58
pituitary gland, embryo E12.CNhs11018.346-16E6	21.43	5.58	3.78	2.52
pituitary gland, embryo E17.CNhs11039.1265-44F5	21.39	2.80	3.46	1.97
thymus, embryo E14.CNhs11041.402-44I4	20.68	3.85	2.23	1.42
eyeball, embryo E17.CNhs11023.1261-18D4	20.65	11.91	9.49	3.32
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2	20.51	0.38	0.58	1.25
eyeball, neonate N02.CNhs11205.1551-44G8	20.33	5.15	4.78	3.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7	20.27	1.13	0.28	0.56
thymus, embryo E16.CNhs11002.456-26C5	20.14	4.16	2.21	1.30
thymus, embryo E15.CNhs11005.430-45I2	20.13	4.31	3.08	1.44
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5	19.88	4.20	1.33	1.10
eyeball, neonate N00.CNhs11207.633-15C6	19.53	8.44	6.26	4.35
heart, embryo E13.CNhs11013.376-3I9	19.45	1.80	3.96	1.98
testis, neonate N00.CNhs11189.1300-22B7	19.25	1.06	2.70	1.53
ovary, neonate N00.CNhs11217.1299-22I4	19.06	1.30	1.30	0.33
forelimb, embryo E13.CNhs10589.384-1E2	19.00	2.64	1.23	2.82
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5	18.77	0.27	1.35	0.95
forelimb, embryo E18.CNhs11008.1520-43B5	18.73	2.06	2.26	1.23
gonad, embryo E13.CNhs11044.1564-45I6	18.71	2.59	3.58	3.18
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1	18.68	1.78	2.67	2.67
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4	18.66	1.46	1.46	1.56
pituitary gland, neonate N00.CNhs11190.1308-22E9	18.57	2.44	2.13	2.13
Mouse Microglia, donor1.CNhs12629.11718-123C8	18.28	0.90	1.50	1.50
intestine, embryo E13.CNhs11010.381-16D5	18.11	1.86	1.39	1.63
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6	17.98	0.00	0.34	0.17
eyeball, neonate N01.CNhs11140.1532-43E7	17.81	7.05	5.25	2.43
forelimb, embryo E15.CNhs11007.437-20E7	17.80	1.67	2.50	1.67
adrenal gland, embryo E14.CNhs11038.406-44C5	17.70	1.04	1.91	1.73
whole body, embryo E16.CNhs10514.453-14F2	17.65	1.65	0.37	0.18
forelimb, embryo E14.CNhs10577.413-26A8	17.54	0.44	2.85	0.66
intestine, embryo E12.CNhs11019.1251-16I5	17.49	2.13	2.56	1.49
Ileum epithelium, pool2.CNhs13232.10253-104C1	17.39	2.27	0.76	0.50
kidney, embryo E15.CNhs10997.434-16F8	17.37	4.57	3.54	1.37
spleen, embryo E16.CNhs11035.461-43C1	17.34	0.62	1.65	0.41
eyeball, embryo E12.CNhs11016.345-16C6	17.31	4.29	4.81	3.25
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7	17.29	4.53	1.34	0.34
Ileum epithelium, pool1.CNhs13199.10252-104B9	17.29	5.51	1.71	0.19
stomach, embryo E17.CNhs11006.1035-18D5	17.15	1.46	1.05	0.21
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9	17.04	0.42	1.26	1.47
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1	16.98	0.51	0.77	0.26
GP2+ M cell, pool3.CNhs13240.11847-124I2	16.81	6.68	1.51	0.65
stomach, embryo E12.CNhs10588.356-43E3	16.61	1.58	1.90	2.21
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5	16.59	0.52	0.83	1.66
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1	16.57	1.43	3.43	2.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5	16.40	4.89	0.70	0.00
forelimb, embryo E11.CNhs10596.335-25E2	16.38	1.94	4.31	4.74
corpus striatum, neonate N00.CNhs11226.630-43F1	16.34	0.25	0.63	0.75
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6	16.29	2.16	0.33	0.50
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8	16.25	0.71	2.83	0.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7	16.19	1.70	2.90	1.02
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8	16.15	1.56	1.04	1.04
kidney, embryo E14.CNhs10606.411-4I9	16.12	4.17	3.22	2.85
skin, neonate N06.CNhs11097.693-20I5	16.12	0.48	0.72	0.48
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1	16.05	0.57	2.01	0.57
Mouse Granule cells, donor1.CNhs12131.11713-123C3	15.98	1.01	1.01	1.01
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4	15.96	1.71	2.24	1.71
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8	15.91	0.09	0.09	0.17
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9	15.85	0.00	0.00	0.00
Mouse Granule cells, donor3.CNhs12108.11636-122C7	15.85	1.90	1.90	1.90
pituitary gland, embryo E15.CNhs10592.427-16B9	15.78	4.61	4.97	0.89
Mouse Microglia, donor2.CNhs12634.11736-123E8	15.75	0.77	2.31	0.38
stomach, embryo E16.CNhs11022.459-17D4	15.66	1.19	1.08	0.97
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7	15.65	3.13	1.56	3.13
liver, neonate N10.CNhs11115.751-24B9	15.60	0.31	1.87	0.62
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1	15.47	1.86	1.86	0.93
heart, embryo E16.CNhs11021.457-17C6	15.43	0.77	1.08	0.93
heart, embryo E11.CNhs10586.331-24E9	15.33	2.69	4.14	0.83
forelimb, embryo E12.CNhs10600.359-14H2	15.32	2.65	2.65	2.08
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6	15.03	2.95	3.83	1.47
heart, embryo E12.CNhs11015.353-12F5	15.01	2.11	1.88	1.64
whole body, embryo E17.CNhs10517.475-3I5	14.99	2.25	1.25	0.50
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2	14.94	0.37	0.98	2.08
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8	14.86	6.65	1.55	0.89
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6	14.71	0.00	0.00	0.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6	14.65	2.96	2.25	1.55
adrenal gland, embryo E16.CNhs11004.1254-43D6	14.61	0.91	1.22	1.52
kidney, embryo E18.CNhs11001.1288-20C7	14.55	3.69	2.72	0.58
liver, neonate N30.CNhs11106.1382-42D1	14.47	0.48	0.48	0.48
stomach, embryo E15.CNhs10603.1252-16G8	14.44	0.81	1.02	0.81
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4	14.39	0.00	0.00	0.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6	14.22	0.00	0.00	0.00
pancreas, embryo E15.CNhs11042.1556-45F2	14.21	1.51	1.21	1.21
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4	14.17	0.40	0.81	1.21
whole body, embryo E13.CNhs10512.372-23H2	14.17	1.20	1.54	1.71
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7	14.09	1.84	0.20	0.20
pancreas, embryo E14.CNhs11012.405-44F4	14.08	3.40	3.40	0.73
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1	14.05	0.71	0.92	1.02
liver, adult pregnant day01.CNhs10466.508-5B2	13.93	1.48	0.89	0.30
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5	13.83	1.43	1.19	0.95
liver, neonate N07.CNhs11103.716-20H2	13.77	0.74	0.00	0.00
liver, neonate N03.CNhs11123.1345-25G2	13.73	0.82	1.10	0.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8	13.72	1.89	2.77	1.26
forelimb, embryo E17.CNhs10598.1517-43C4	13.58	1.04	1.39	1.04
adrenal gland, embryo E18.CNhs11026.1262-18F5	13.57	0.30	0.45	0.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6	13.53	0.62	0.00	0.62
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6	13.53	2.56	1.99	1.42
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5	13.41	1.03	2.06	1.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5	13.37	1.03	1.03	0.34
lung, embryo E14.CNhs10604.404-26F8	13.36	3.42	1.30	0.65
stomach, embryo E18.CNhs10999.1286-20C6	13.32	0.66	0.44	0.66
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3	13.32	1.11	0.89	0.44
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3	13.21	0.00	0.00	0.00
lung, embryo E16.CNhs10998.458-17B6	13.14	1.88	1.64	0.70
whole body, embryo E14.5.CNhs10578.420-27D2	13.13	0.97	0.97	0.73
whole body, embryo E18.CNhs10516.493-3B3	13.10	0.70	1.17	0.94
kidney, neonate N10.CNhs11206.758-6D5	13.09	1.14	0.95	1.01
cecum, adult.CNhs10467.37-13H4	13.05	27.96	1.86	3.73
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3	13.01	1.45	0.43	0.34
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5	13.01	1.70	1.08	0.62
liver, embryo E17.CNhs10510.481-18A3	12.99	0.51	0.51	0.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5	12.95	0.85	1.27	0.51
whole body, embryo E17.5.CNhs10513.490-9F9	12.92	1.93	0.96	0.39
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7	12.91	0.86	0.00	0.00
lung, neonate N00.CNhs11224.640-42C6	12.88	3.12	1.17	0.98
stomach, neonate N25.CNhs11104.1355-25E4	12.83	1.31	0.79	0.26
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9	12.78	0.00	0.52	0.00
intestine, neonate N01.CNhs11192.1322-23E9	12.68	0.99	0.82	0.49
heart, embryo E17.CNhs11025.479-18E5	12.56	0.23	0.23	0.93
lung, neonate N20.CNhs11109.822-18A4	12.45	1.31	0.16	0.33
kidney, embryo E17.CNhs11028.483-18I2	12.42	3.46	4.28	2.04
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5	12.41	1.08	0.99	0.79
pancreas, embryo E17.CNhs10599.1558-45G3	12.40	1.18	1.77	0.59
whole body, embryo E14.CNhs10519.395-14B1	12.37	0.63	1.47	1.26
Mouse hepatocyte, donor6.CNhs13090.11822-124F4	12.35	0.65	0.00	0.00
heart, embryo E18.CNhs11030.1283-20G3	12.34	0.00	0.00	0.54
pancreas, embryo E16.CNhs11003.460-26E5	12.26	0.75	0.75	0.38
heart, embryo E15.CNhs11017.431-16C8	12.20	0.39	2.16	0.59
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3	12.17	2.61	0.58	0.58
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7	12.15	0.45	0.00	0.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5	12.13	2.02	0.00	0.00
kidney, neonate N30.CNhs11203.1385-42H1	12.09	0.25	0.99	0.25
lung, embryo E15.CNhs11020.432-17C5	12.05	2.38	2.38	1.87
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3	12.03	0.00	1.72	0.57
lung, neonate N07.CNhs11111.715-19A3	11.96	0.44	0.44	0.44
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6	11.88	0.00	0.00	0.42
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4	11.81	0.00	0.17	0.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5	11.72	1.09	0.96	0.64
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2	11.71	0.78	1.56	1.17
lung, embryo E18.CNhs10583.1287-20I6	11.66	2.38	1.67	0.24
intestine, embryo E15.CNhs10602.976-16D8	11.60	0.90	0.64	0.90
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5	11.54	1.42	0.35	0.53
CD326+ enterocyte, pool2.CNhs13197.11849-124I4	11.52	2.00	1.00	0.00
whole body, neonate N06.CNhs10515.692-21D1	11.47	1.10	1.10	0.22
uterus, adult pregnant day19.CNhs10497.590-15F5	11.45	0.38	0.75	0.00
eyeball, neonate N16.CNhs11188.777-19A2	11.38	2.07	2.33	0.26
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5	11.38	1.16	0.77	0.77
heart, embryo E14.CNhs10597.403-26D4	11.36	1.66	1.89	1.89
stomach, neonate N07.CNhs11210.718-18A9	11.32	0.99	0.58	0.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9	11.25	2.23	2.03	0.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5	11.24	0.66	1.31	0.37
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5	11.22	1.12	0.56	1.68
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3	11.20	1.08	0.43	0.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5	11.11	0.58	1.46	0.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1	11.04	1.26	0.63	0.63
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5	11.03	1.66	0.83	0.71
intestine, neonate N25.CNhs11121.1352-25E3	11.02	4.76	1.30	0.00
cortex, neonate N30.CNhs11107.1392-42F2	11.00	0.26	0.51	0.77
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5	11.00	1.63	0.95	0.54
intestine, embryo E16.CNhs10585.463-22H4	10.89	1.01	0.61	0.61
lung, embryo E17.CNhs10605.480-44A6	10.89	3.18	1.34	0.50
Mouse hepatocyte, donor1.CNhs13078.11714-123C4	10.88	0.68	0.68	0.68
liver, embryo E16.CNhs10523.462-17F5	10.85	0.24	0.48	0.00
intestine, neonate N06.CNhs11102.688-20B8	10.81	1.76	1.76	0.25
hippocampus, neonate N00.CNhs11228.627-43G1	10.80	0.62	0.41	1.03
stomach, neonate N03.CNhs11193.1340-24B8	10.79	0.40	0.94	0.27
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5	10.78	0.81	1.04	1.16
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7	10.77	1.61	1.08	0.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5	10.76	1.02	0.73	0.87
intestine, neonate N07.CNhs11095.720-20F2	10.74	1.59	0.40	0.40
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5	10.74	1.15	0.86	0.46
skin, adult.CNhs10492.30-1C3	10.72	0.16	0.16	0.00
skin, neonate N00.CNhs11124.650-25G4	10.66	0.81	1.29	1.13
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3	10.62	2.02	1.01	1.01
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5	10.59	1.93	1.60	0.32
Mouse Granule cells, donor2.CNhs12357.11731-123E3	10.58	0.53	0.53	1.59
pancreas, neonate N25.CNhs11094.1555-45E2	10.54	1.05	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5	10.54	1.51	1.22	0.47
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7	10.48	1.20	0.69	0.17
diencephalon, neonate N30.CNhs11201.1388-42B2	10.38	0.16	1.30	0.49
whole body, embryo E12.CNhs10587.857-27C9	10.37	3.59	3.99	1.60
pancreas, neonate N02.CNhs11139.1539-43D8	10.34	0.36	1.43	0.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2	10.32	1.15	0.23	0.23
kidney, neonate N00.CNhs11214.646-21G7	10.24	2.67	2.60	2.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1	10.18	4.33	0.65	0.87
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1	10.17	0.00	0.56	0.56
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3	10.16	0.00	0.00	0.00
pancreas, embryo E18.CNhs10580.1535-43I7	10.15	0.92	0.92	0.31
whole body, neonate N01.CNhs10576.659-23C6	10.14	0.19	0.38	0.57
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3	10.10	1.28	2.39	0.92
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5	10.10	1.44	1.03	1.03
pancreas, neonate N00.CNhs11105.645-26G9	10.08	0.52	0.00	0.52
lung, neonate N10.CNhs11219.750-23E6	10.05	0.96	0.16	0.48
heart, neonate N03.CNhs11221.1349-25I2	10.04	0.49	0.49	0.66
bone (os femoris), neonate N02.CNhs11227.1985-43F5	10.03	0.49	1.94	0.16
intestine, embryo E17.CNhs10582.482-18D3	10.01	0.89	0.22	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5	10.00	0.48	0.00	0.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9	9.91	0.57	0.57	0.28
amnion, adult pregnant day17.5.CNhs10488.583-22A8	9.89	0.99	0.49	0.25
whole body, neonate N00.CNhs10525.657-19C2	9.88	1.29	1.07	1.07
Mouse hepatocyte, donor8.CNhs13091.11824-124F6	9.86	0.00	0.00	0.00
medulla oblongata, neonate N30.CNhs11200.1396-42A3	9.85	0.23	0.35	0.59
pancreas, neonate N01.CNhs11138.1531-43D7	9.82	2.18	2.18	0.36
pancreas, neonate N16.CNhs11136.787-43B6	9.80	0.95	0.00	0.00
lung, neonate N06.CNhs11212.683-20E5	9.77	1.42	0.79	0.32
placenta, adult pregnant day17.CNhs10464.577-18G3	9.74	0.21	0.64	0.21
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8	9.58	3.74	0.47	0.00
cortex, adult.CNhs10473.12-14D5	9.56	0.35	0.00	0.17
intestine, neonate N30.CNhs11131.1384-42G1	9.56	4.98	1.39	0.20
stomach, adult.CNhs10503.33-1H6	9.55	0.95	0.00	0.00
skin, neonate N03.CNhs11215.662-22H3	9.47	0.78	0.48	0.42
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1	9.41	0.34	0.34	0.00
adrenal gland, neonate N00.CNhs11191.1311-23C1	9.41	0.59	0.82	0.71
ovary, adult.CNhs10507.91-2I7	9.37	0.85	0.43	0.43
hippocampus, adult.CNhs10478.13-16E8	9.25	0.21	0.63	0.00
oviduct, adult pregnant day01.CNhs10500.988-6G6	9.24	0.99	0.33	0.49
vagina, adult.CNhs10502.89-27D5	9.22	0.21	0.43	0.21
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8	9.13	0.45	0.89	0.22
heart, neonate N00.CNhs11213.639-21E3	9.11	0.12	0.58	0.35
intestine, neonate N20.CNhs11187.827-18D1	8.99	0.90	1.80	0.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1	8.98	0.00	2.57	2.57
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7	8.85	0.42	0.14	0.00
liver, neonate N20.CNhs11220.823-25A3	8.84	2.53	1.26	0.00
intestine, embryo E18.CNhs10526.1289-20F7	8.75	0.38	1.14	0.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9	8.70	1.45	0.00	0.73
olfactory brain, adult.CNhs10489.18-22I9	8.68	0.00	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5	8.59	1.01	1.26	0.51
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2	8.53	0.00	0.71	0.71
adrenal gland, embryo E17.CNhs11043.1263-45I1	8.53	0.69	0.69	0.23
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8	8.43	0.00	0.00	0.00
cerebellum, neonate N30.CNhs11135.1395-42I2	8.38	0.00	0.00	0.21
intestine, neonate N10.CNhs11098.755-23A5	8.38	1.36	0.58	0.39
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6	8.30	1.98	0.40	0.40
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2	8.29	0.46	1.38	0.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9	8.28	0.00	0.52	0.00
liver, neonate N25.CNhs11198.1368-26H1	8.25	0.18	0.36	0.18
skin, neonate N10.CNhs11108.762-6C4	8.21	0.66	0.82	0.49
cerebellum, adult.CNhs10494.15-8B2	8.20	0.00	0.29	0.29
liver, embryo E12.CNhs10601.355-15F8	8.18	0.17	0.33	0.50
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7	8.12	1.19	1.19	0.48
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5	8.11	1.01	1.27	0.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C8	8.10	0.54	0.54	0.00
liver, embryo E18.CNhs10579.499-43G4	8.06	0.29	0.00	0.00
liver, neonate N00.CNhs11117.641-24F4	7.94	0.32	0.16	0.16
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5	7.92	0.94	0.75	0.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7	7.91	0.00	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5	7.87	0.73	1.46	0.91
pituitary gland, adult.CNhs10493.21-1G8	7.83	1.02	0.00	0.34
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5	7.80	0.74	0.29	0.44
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5	7.72	0.50	0.84	0.84
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6	7.64	0.15	0.76	0.46
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1	7.61	0.00	0.00	0.00
lung, neonate N25.CNhs11119.1359-25C7	7.60	0.69	0.52	0.00
spleen, embryo E18.CNhs11011.1271-21F2	7.59	0.00	1.30	0.93
spleen, neonate N25.CNhs11099.1354-25G3	7.55	0.00	0.00	0.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5	7.55	0.00	0.00	1.51
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1	7.54	0.00	0.00	0.00
liver, embryo E14.CNhs10594.409-16E1	7.42	0.00	0.00	0.00
lung, adult.CNhs10474.28-22B1	7.39	0.55	0.37	0.37
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2	7.35	2.53	0.25	0.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5	7.32	0.00	0.56	0.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3	7.28	0.77	0.51	0.13
liver, embryo E13.CNhs10524.378-3H6	7.27	0.20	0.20	0.79
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6	7.19	0.80	0.11	0.00
adrenal gland, neonate N25.CNhs11223.1377-27I3	7.16	0.38	0.13	0.13
colon, adult.CNhs10468.36-18H7	7.15	1.28	0.51	0.00
intestine, neonate N00.CNhs11126.644-26D1	7.12	1.42	0.95	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5	7.11	1.11	0.44	0.67
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4	6.98	0.00	0.56	0.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I3	6.96	0.60	0.30	0.00
uterus, adult.CNhs10509.92-27E5	6.96	3.30	0.00	0.37
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5	6.96	2.05	0.41	0.82
corpus striatum, adult.CNhs10487.19-21D8	6.86	0.46	0.00	0.00
lung, neonate N30.CNhs11133.1394-42H2	6.80	1.16	0.43	0.14
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8	6.80	0.00	0.00	0.00
bone (os femoris), neonate N20.CNhs11195.1350-25C3	6.79	0.97	0.00	0.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2	6.78	0.00	0.00	0.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2	6.75	2.09	0.30	0.50
kidney, neonate N25.CNhs11122.1353-25F3	6.75	1.41	0.16	0.16
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6	6.75	0.00	0.68	0.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7	6.75	0.00	0.00	0.90
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7	6.71	0.12	0.24	0.24
kidney, neonate N20.CNhs11113.832-19I1	6.64	1.18	0.15	0.30
mammary gland, adult pregnant day19.CNhs10476.588-5H2	6.62	0.28	0.00	0.00
spleen, neonate N10.CNhs11116.752-24D1	6.59	0.19	0.94	0.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2	6.54	0.17	0.17	0.34
vesicular gland, adult.CNhs10491.51-27F8	6.52	0.50	0.00	0.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7	6.45	0.46	0.00	0.00
heart, neonate N10.CNhs11118.749-24G1	6.40	0.33	0.49	0.49
corpora quadrigemina, adult.CNhs10501.16-22A4	6.29	0.15	0.45	0.00
medulla oblongata, adult.CNhs10477.17-12C2	6.26	0.16	0.48	0.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2	6.22	0.75	0.25	0.50
heart, neonate N30.CNhs11202.1390-42D2	6.17	0.00	0.00	0.13
prostate, adult.CNhs10470.859-1F8	6.17	0.88	0.00	0.00
heart, neonate N20.CNhs11127.821-26I6	6.14	0.00	0.29	0.15
small intestine, neonate N16.CNhs11114.790-21I1	6.12	1.46	0.29	0.00
spinal cord, adult.CNhs10505.24-13C9	6.12	0.37	0.19	0.37
diencephalon, adult.CNhs10482.20-12F2	6.03	0.21	0.42	0.21
liver, embryo E15.CNhs10520.433-16D7	5.88	0.00	0.00	0.00
adrenal gland, adult.CNhs10508.49-24D7	5.79	0.45	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5	5.77	0.82	1.65	0.41
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4	5.76	0.14	0.14	0.27
urinary bladder, adult.CNhs10481.879-12E4	5.60	0.00	0.39	0.19
intestine, adult.CNhs10496.178-9A3	5.55	0.79	0.00	0.26
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5	5.52	0.79	1.32	0.26
Mouse Schwann, donor1.CNhs12507.11728-123D9	5.45	0.08	0.23	0.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1	5.40	0.00	0.00	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3	5.39	0.41	0.28	0.28
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1	5.33	0.00	0.00	0.00
eyeball, adult.CNhs10484.31-12G4	5.26	0.21	0.42	0.21
spleen, neonate N20.CNhs11112.824-19H1	5.06	0.14	0.00	0.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2	5.05	0.50	0.25	0.25
placenta, adult pregnant day10.CNhs10472.539-13I7	4.93	0.00	0.00	0.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5	4.90	0.00	0.00	0.00
whole body, neonate N10.CNhs10518.761-6B4	4.87	1.16	0.93	0.70
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3	4.86	0.00	0.00	0.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5	4.83	0.00	0.00	0.00
aorta, adult.CNhs10498.46-23H1	4.77	0.14	0.00	0.00
Mouse Schwann, donor2.CNhs12573.11746-123F9	4.61	0.23	0.30	0.23
tongue, adult.CNhs10499.32-1B4	4.53	0.23	0.00	0.00
kidney, embryo E16.CNhs10584.464-22A5	4.51	2.25	2.25	2.25
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9	4.48	0.70	0.28	0.00
heart, neonate N16.CNhs11209.782-15G1	4.46	0.16	0.41	0.16
mammary gland, adult lactating day02.CNhs10480.595-22B6	4.43	0.98	0.00	0.00
bone (os femoris), neonate N16.CNhs11225.1525-43A6	4.42	0.00	0.00	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6	4.42	0.34	0.17	0.34
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4	4.32	0.13	0.13	0.13
intestinal mucosa, adult.CNhs10506.860-29I3	4.30	0.33	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3	4.19	0.00	0.00	0.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2	4.12	0.51	0.00	0.00
spleen, adult.CNhs10465.25-2G2	4.10	0.00	0.00	0.00
heart, neonate N25.CNhs11196.1351-25D3	3.95	0.22	0.44	0.00
accessory axillary lymph node, adult.CNhs10475.1063-29H9	3.88	0.26	0.26	0.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1	3.84	0.96	0.64	0.16
epididymis, adult.CNhs10490.58-23B2	3.79	0.25	0.25	0.51
bone (os femoris), adult.CNhs10483.56-12G2	3.54	0.00	0.00	0.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9	3.13	0.78	0.52	0.00
pancreas, neonate N30.CNhs11182.1548-44H5	3.09	0.00	0.00	0.00
pancreas, adult.CNhs10486.34-16E4	2.65	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1	2.34	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8	2.09	0.00	0.00	0.00
submandibular gland, adult.CNhs10469.59-29C1	1.86	0.00	1.24	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9	1.76	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2	0.68	0.00	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4	0.49	0.00	0.00	0.00
Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7	0.00	0.00	0.00	0.00

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p1@Lrrc42
p2@Lrrc42
p3@Lrrc42
p4@Lrrc42

• Click each plot point to find sample in table

ENCODE TF ChIP-seq peak enrichment analysis Analyst: Erik Arner <br>Summary: For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><br><br>link to source dataset.<br>data

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No analysis results for this cluster

Details<b>Summary:</b>It includes sequences from the international sequence collaboration, Swiss-Prot, and RefSeq. The RefSeq subset of this file is also available as gene2refseq.<br><br>links to source dataset.<br>human <br>mouse

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GeneID:	77809
LocusTag:	-
chromosome:	4
map location:	4 C7, 4, 4 C7;;4
type of gene:	protein-coding
Symbol from nomenclature authority:	Lrrc42
Full name from nomenclature authority:	leucine rich repeat containing 42
Nomenclature status:	O
Other designations:	leucine-rich repeat-containing protein 42
Modification date:	18.11.2011