FFCP PHASE1:Hg19::chr1:13840448..13840477,-
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p4@LRRC38 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_LRRC38_5end |
| Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
| Association with transcript: | 65bp_to_ENST00000376085_5end |
| EntrezGene: | LRRC38 |
| HGNC: | 27005 |
| UniProt: | Q5VT99 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p4@LRRC38 |
|---|
0
5
10
15
20
25
30
35
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| pineal body | 2.81e-17 | 2 |
| regional part of epithalamus | 2.81e-17 | 2 |
| secretory circumventricular organ | 2.81e-17 | 2 |
| circumventricular organ | 2.81e-17 | 2 |
| epithalamus | 2.81e-17 | 2 |
| muscle structure | 4.54e-17 | 2 |
| muscle organ | 4.54e-17 | 2 |
| chordate pharynx | 1.50e-12 | 10 |
| pharyngeal region of foregut | 1.50e-12 | 10 |
| pharynx | 2.00e-11 | 11 |
Showing 1 to 10 of 64 entries
| Ontology term | p-value | n |
|---|---|---|
| papillary adenocarcinoma | 5.75e-09 | 1 |
Showing 1 to 1 of 1 entries
