FFCP PHASE1:Hg19::chr1:26737274..26737286,+
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| Short description: | p3@LIN28A |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_LIN28A_5end |
| Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
| Association with transcript: | 5bp_to_ENST00000326279, NM_024674, uc001bmi.1, uc001bmj.2_5end |
| EntrezGene: | LIN28A |
| HGNC: | 15986 |
| UniProt: | Q9H9Z2 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p3@LIN28A |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| embryonic stem cell | 2.99e-46 | 5 |
| germ line cell | 2.24e-45 | 7 |
| germ cell | 2.24e-45 | 7 |
| neuron | 1.05e-14 | 6 |
| neuroblast | 1.05e-14 | 6 |
| electrically signaling cell | 1.05e-14 | 6 |
| neuronal stem cell | 3.65e-11 | 8 |
| melanocyte | 6.32e-09 | 10 |
| melanoblast | 6.32e-09 | 10 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| testis | 3.15e-18 | 8 |
| male reproductive organ | 2.51e-13 | 11 |
| gonad | 1.23e-10 | 21 |
| indifferent external genitalia | 1.23e-10 | 21 |
| indifferent gonad | 1.23e-10 | 21 |
| gonad primordium | 1.23e-10 | 21 |
| external genitalia | 3.80e-10 | 22 |
| male organism | 9.54e-07 | 22 |
| male reproductive system | 9.54e-07 | 22 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| germ cell and embryonal cancer | 1.21e-31 | 22 |
| germ cell cancer | 1.21e-31 | 22 |
| islet cell tumor | 3.96e-10 | 1 |
| endocrine pancreas cancer | 3.96e-10 | 1 |
| pancreatic endocrine carcinoma | 3.96e-10 | 1 |
Showing 1 to 5 of 5 entries
