FFCP PHASE1:Hg19::chr1:89829610..89829627,+
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p1@GBP6 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_GBP6_5end |
| Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
| Association with transcript: | 0bp_to_ENST00000370456, ENST00000535065_5end |
| EntrezGene: | GBP6 |
| HGNC: | 25395 |
| UniProt: | Q6ZN66F5H7G9 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@GBP6 |
|---|
0
50
100
150
200
250
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell of alimentary canal | 4.10e-10 | 20 |
| buccal mucosa cell | 9.70e-10 | 1 |
| endothelial cell of viscerocranial mucosa | 9.70e-10 | 1 |
| keratinized cell of the oral mucosa | 9.70e-10 | 1 |
| epithelial cell of esophagus | 1.48e-09 | 1 |
| acinar cell | 2.23e-07 | 5 |
Showing 1 to 6 of 6 entries
| Ontology term | p-value | n |
|---|---|---|
| throat | 6.82e-18 | 2 |
| open tracheal system trachea | 7.43e-18 | 2 |
| anterior region of body | 1.92e-14 | 62 |
| craniocervical region | 1.92e-14 | 62 |
| mouth | 1.96e-13 | 29 |
| stomodeum | 1.96e-13 | 29 |
| oral opening | 2.63e-13 | 22 |
| tongue | 1.44e-12 | 3 |
| gustatory system | 1.44e-12 | 3 |
| future tongue | 1.44e-12 | 3 |
Showing 1 to 10 of 27 entries
| Ontology term | p-value | n |
|---|---|---|
| skin squamous cell carcinoma | 6.31e-10 | 1 |
| keratoacanthoma | 6.31e-10 | 1 |
Showing 1 to 2 of 2 entries
