FFCP PHASE1:Hg19::chr5:83016808..83016832,-
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p2@HAPLN1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_HAPLN1_5end |
| Coexpression cluster: | C4525_Fibroblast_Saos2_Chondrocyte_Preadipocyte_Osteoblast_trachea_pleomorphic |
| Association with transcript: | 63bp_to_NM_001884, uc003kin.2_5end |
| EntrezGene: | HAPLN1 |
| HGNC: | 2380 |
| UniProt: | P10915 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@HAPLN1 |
|---|
0
20
40
60
80
100
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| fibroblast | 2.58e-19 | 76 |
| vascular associated smooth muscle cell | 5.53e-11 | 32 |
| skin fibroblast | 1.53e-10 | 23 |
| osteoblast | 3.22e-09 | 11 |
| osteoprogenitor cell | 3.22e-09 | 11 |
| mesenchyme condensation cell | 3.22e-09 | 11 |
| stem cell | 2.00e-07 | 441 |
| chondroblast | 4.75e-07 | 6 |
| chondrocyte | 4.75e-07 | 6 |
| smooth muscle cell | 6.56e-07 | 43 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| artery | 4.77e-09 | 42 |
| arterial blood vessel | 4.77e-09 | 42 |
| arterial system | 4.77e-09 | 42 |
| epithelial tube open at both ends | 4.98e-09 | 59 |
| blood vessel | 4.98e-09 | 59 |
| blood vasculature | 4.98e-09 | 59 |
| vascular cord | 4.98e-09 | 59 |
| vasculature | 5.50e-09 | 78 |
| vascular system | 5.50e-09 | 78 |
| skin of body | 7.24e-09 | 41 |
Showing 1 to 10 of 18 entries
| Ontology term | p-value | n |
|---|---|---|
| musculoskeletal system disease | 5.97e-09 | 5 |
| myotonic disease | 5.97e-09 | 5 |
| muscle tissue disease | 5.97e-09 | 5 |
| myopathy | 5.97e-09 | 5 |
| muscular disease | 5.97e-09 | 5 |
| myotonic dystrophy | 5.97e-09 | 5 |
Showing 1 to 6 of 6 entries
