FFCP PHASE2:Hg19::chr11:27722021..27722038,-
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| Short description: | p2@BDNF |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_BDNF_5end |
| Coexpression cluster: | C1629_hepatic_spindle_Fibroblast_Smooth_liposarcoma_papillary_Ciliary |
| Association with transcript: | 0bp_to_ENST00000356660, ENST00000418212, ENST00000533246, NM_001143813, NM_001143814, NM_001709, uc001mru.2, uc009yjd.2, uc010rdw.1_5end |
| EntrezGene: | BDNF |
| HGNC: | 1033 |
| UniProt: | P23560 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p2@BDNF |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| smooth muscle cell | 1.69e-23 | 43 |
| smooth muscle myoblast | 1.69e-23 | 43 |
| vascular associated smooth muscle cell | 1.96e-20 | 32 |
| muscle cell | 5.91e-20 | 55 |
| fibroblast | 1.96e-19 | 76 |
| muscle precursor cell | 8.54e-19 | 58 |
| myoblast | 8.54e-19 | 58 |
| multi-potent skeletal muscle stem cell | 8.54e-19 | 58 |
| electrically responsive cell | 4.31e-18 | 61 |
| electrically active cell | 4.31e-18 | 61 |
Showing 1 to 10 of 14 entries
| Ontology term | p-value | n |
|---|---|---|
| skeletal muscle tissue | 1.99e-16 | 62 |
| striated muscle tissue | 1.99e-16 | 62 |
| myotome | 1.99e-16 | 62 |
| muscle tissue | 3.83e-16 | 64 |
| musculature | 3.83e-16 | 64 |
| musculature of body | 3.83e-16 | 64 |
| dense mesenchyme tissue | 6.38e-16 | 73 |
| somite | 9.76e-16 | 71 |
| presomitic mesoderm | 9.76e-16 | 71 |
| presumptive segmental plate | 9.76e-16 | 71 |
Showing 1 to 10 of 42 entries
