FFCP PHASE2:Hg19::chr17:48272988..48273034,-
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p28@COL1A1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_28_at_COL1A1_5end |
| Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
| Association with transcript: | 0bp_to_ENST00000471344_5end |
| EntrezGene: | COL1A1 |
| HGNC: | 2197 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p28@COL1A1 |
|---|
0
10
20
30
40
50
60
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| fibroblast | 8.91e-24 | 76 |
| multi fate stem cell | 4.74e-18 | 427 |
| muscle precursor cell | 2.96e-17 | 58 |
| myoblast | 2.96e-17 | 58 |
| multi-potent skeletal muscle stem cell | 2.96e-17 | 58 |
| muscle cell | 4.20e-17 | 55 |
| somatic stem cell | 4.55e-17 | 433 |
| stem cell | 8.18e-16 | 441 |
| smooth muscle cell | 4.40e-14 | 43 |
| smooth muscle myoblast | 4.40e-14 | 43 |
Showing 1 to 10 of 22 entries
| Ontology term | p-value | n |
|---|---|---|
| skeletal muscle tissue | 1.21e-17 | 62 |
| striated muscle tissue | 1.21e-17 | 62 |
| myotome | 1.21e-17 | 62 |
| muscle tissue | 1.41e-16 | 64 |
| musculature | 1.41e-16 | 64 |
| musculature of body | 1.41e-16 | 64 |
| dense mesenchyme tissue | 1.90e-16 | 73 |
| somite | 3.27e-16 | 71 |
| presomitic mesoderm | 3.27e-16 | 71 |
| presumptive segmental plate | 3.27e-16 | 71 |
Showing 1 to 10 of 40 entries
