FFCP PHASE2:Hg19::chr21:34100296..34100338,-
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p2@SYNJ1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_SYNJ1_5end |
| Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
| Association with transcript: | -46bp_to_ENST00000357345, ENST00000382491, ENST00000429236, NM_001160302, NM_001160306, uc002yqf.2, uc002yqg.2_5end |
| EntrezGene: | SYNJ1 |
| HGNC: | 11503 |
| UniProt: | O43426C9JW66B9EGN3 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@SYNJ1 |
|---|
0
5
10
15
20
25
30
35
40
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| leukocyte | 1.21e-17 | 136 |
| hematopoietic stem cell | 1.23e-13 | 168 |
| hematopoietic lineage restricted progenitor cell | 1.45e-13 | 120 |
| nongranular leukocyte | 1.26e-12 | 115 |
| hematopoietic cell | 3.59e-12 | 177 |
| hematopoietic oligopotent progenitor cell | 4.40e-12 | 161 |
| hematopoietic multipotent progenitor cell | 4.40e-12 | 161 |
| myeloid leukocyte | 2.78e-11 | 72 |
| myeloid lineage restricted progenitor cell | 6.63e-09 | 66 |
| granulocyte monocyte progenitor cell | 6.68e-09 | 67 |
Showing 1 to 10 of 17 entries
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 1.36e-35 | 114 |
| neural tube | 2.26e-32 | 56 |
| neural rod | 2.26e-32 | 56 |
| future spinal cord | 2.26e-32 | 56 |
| neural keel | 2.26e-32 | 56 |
| regional part of nervous system | 1.66e-30 | 53 |
| regional part of brain | 1.66e-30 | 53 |
| central nervous system | 1.09e-28 | 81 |
| nervous system | 7.23e-28 | 89 |
| regional part of forebrain | 1.67e-27 | 41 |
Showing 1 to 10 of 45 entries
