FFCP PHASE2:Hg19::chr4:55096011..55096052,+
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| Short description: | p5@PDGFRA |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_PDGFRA_5end |
| Coexpression cluster: | C720_Smooth_Fibroblast_Preadipocyte_Sertoli_Ewing_hepatic_Synoviocyte |
| Association with transcript: | 1bp_to_ENST00000503856_5end |
| EntrezGene: | PDGFRA |
| HGNC: | 8803 |
| UniProt: | D6RIG5 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p5@PDGFRA |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| fibroblast | 6.94e-21 | 76 |
| multi fate stem cell | 1.16e-14 | 427 |
| somatic stem cell | 4.88e-14 | 433 |
| skin fibroblast | 3.04e-13 | 23 |
| stem cell | 3.07e-13 | 441 |
| muscle cell | 3.77e-10 | 55 |
| muscle precursor cell | 3.77e-10 | 58 |
| myoblast | 3.77e-10 | 58 |
| multi-potent skeletal muscle stem cell | 3.77e-10 | 58 |
| smooth muscle cell | 6.14e-10 | 43 |
Showing 1 to 10 of 22 entries
| Ontology term | p-value | n |
|---|---|---|
| omentum | 5.05e-10 | 6 |
| peritoneum | 5.05e-10 | 6 |
| abdominal cavity | 5.05e-10 | 6 |
| visceral peritoneum | 5.05e-10 | 6 |
| connective tissue | 2.76e-09 | 371 |
| skeletal muscle tissue | 5.13e-09 | 62 |
| striated muscle tissue | 5.13e-09 | 62 |
| myotome | 5.13e-09 | 62 |
| muscle tissue | 1.65e-08 | 64 |
| musculature | 1.65e-08 | 64 |
Showing 1 to 10 of 47 entries
| Ontology term | p-value | n |
|---|---|---|
| musculoskeletal system disease | 4.45e-08 | 5 |
| myotonic disease | 4.45e-08 | 5 |
| muscle tissue disease | 4.45e-08 | 5 |
| myopathy | 4.45e-08 | 5 |
| muscular disease | 4.45e-08 | 5 |
| myotonic dystrophy | 4.45e-08 | 5 |
Showing 1 to 6 of 6 entries
