FFCP PHASE2:Hg19::chr4:77357010..77357040,+
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| Short description: | p6@SHROOM3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_6_at_SHROOM3_5end |
| Coexpression cluster: | C1944_Astrocyte_Ciliary_Lens_colon_teratocarcinoma_gastric_Neural |
| Association with transcript: | -224bp_to_ENST00000497440_5end |
| EntrezGene: | SHROOM3 |
| HGNC: | 30422 |
| UniProt: | NA |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p6@SHROOM3 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural cell | 5.77e-28 | 25 |
| oligodendrocyte | 2.20e-25 | 7 |
| macroglial cell | 2.20e-25 | 7 |
| astrocyte | 2.20e-25 | 7 |
| oligodendrocyte precursor cell | 2.20e-25 | 7 |
| neurectodermal cell | 5.39e-22 | 59 |
| neuronal stem cell | 2.04e-21 | 8 |
| ectodermal cell | 2.12e-17 | 72 |
| astrocyte of the cerebral cortex | 2.83e-16 | 3 |
| ciliated cell | 4.23e-16 | 3 |
Showing 1 to 10 of 28 entries
| Ontology term | p-value | n |
|---|---|---|
| pigment epithelium of eye | 1.16e-27 | 11 |
| atypical epithelium | 2.72e-20 | 4 |
| neural plate | 7.53e-17 | 82 |
| presumptive neural plate | 7.53e-17 | 82 |
| anterior segment of eyeball | 1.63e-16 | 14 |
| ciliary epithelium | 4.23e-16 | 3 |
| ciliary body | 4.23e-16 | 3 |
| neurectoderm | 7.10e-16 | 86 |
| central nervous system | 9.65e-15 | 81 |
| camera-type eye | 1.22e-14 | 20 |
Showing 1 to 10 of 54 entries
