FFCP PHASE2:Hg19::chr7:22396829..22396835,-
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p14@RAPGEF5 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_14_at_RAPGEF5_5end |
| Coexpression cluster: | C4674_lymphoma_diffuse_small_smallcell_caudate_acute_signet |
| Association with transcript: | -66bp_to_ENST00000405243_5end |
| EntrezGene: | RAPGEF5 |
| HGNC: | 16862 |
| UniProt: | E9PGY3 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p14@RAPGEF5 |
|---|
0.0
1.0
2.0
3.0
4.0
5.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| B-1 B cell | 9.92e-13 | 1 |
| lymphocyte of B lineage | 1.13e-11 | 24 |
| pro-B cell | 1.13e-11 | 24 |
| mature B cell | 5.41e-07 | 2 |
| pre-B-II cell | 5.41e-07 | 2 |
| transitional stage B cell | 5.41e-07 | 2 |
| small pre-B-II cell | 5.41e-07 | 2 |
| immature B cell | 5.41e-07 | 2 |
Showing 1 to 8 of 8 entries
| Ontology term | p-value | n |
|---|---|---|
| caudate-putamen | 2.56e-15 | 3 |
| dorsal striatum | 2.56e-15 | 3 |
| vermiform appendix | 1.11e-12 | 1 |
| caecum | 1.11e-12 | 1 |
| midgut | 1.11e-12 | 1 |
| putamen | 3.85e-12 | 1 |
| corpus striatum | 9.90e-12 | 4 |
| striatum | 9.90e-12 | 4 |
| ventral part of telencephalon | 9.90e-12 | 4 |
| future corpus striatum | 9.90e-12 | 4 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| lymphoma | 7.46e-28 | 10 |
| lymphatic system cancer | 9.92e-13 | 1 |
| lymphosarcoma | 9.92e-13 | 1 |
| skin squamous cell carcinoma | 4.81e-12 | 1 |
| keratoacanthoma | 4.81e-12 | 1 |
| lung small cell carcinoma | 5.70e-12 | 4 |
| organ system cancer | 3.36e-08 | 137 |
| bronchus cancer | 3.24e-07 | 7 |
| bronchogenic carcinoma | 3.24e-07 | 7 |
Showing 1 to 9 of 9 entries
