Personal tools

MacroAPE 1083:16-RBYKBTWACG

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: 16-RBYKBTWACG,CNhs11998,BestGuess:E4F1_f1_HM09(0.704946787356956),T:366.0(9.77%),B:2267.0(5.23%),P:1e-28

Motif matrix
POACGT
1139.81256.364114.19255.632
20.366141.27698.454126.27
391.134122.9760.366151.524
423.42441.724154.086146.766
50.366131.76115.656117.852
60.3660.3660.366364.902
7179.70630.37823.424132.492
8207.52289.3040.36668.808
90.366364.9020.3660.366
100.3660.366364.9020.366

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

YAP6#MA0418.104.39302e-050.02091080.041722710ACTGCTAACGGTCGCTTACGTAATCAGACC-
ABF1#MA0265.150.0001936180.0921620.09194410ACTGCTAACGATATCACTTTATACGA-
YAP1#MA0415.110.00063280.3012130.20033410ACTGCTAACGATTTGCTTACGTAAGCTCGT+
id1#MA0120.120.001494690.7114710.23659610ACTGCTAACGTTTTCCTTTTCG+
LEU3#MA0324.1-10.002857171.360010.3876569ACTGCTAACGCCGGTAACGG-
GABPA#MA0062.200.01109725.282270.99763510ACTGCTAACGGCCACTTCCGG-
FOXF2#MA0030.100.01347336.413270.99763510ACTGCTAACGATTGTTTACGTTTG-
CST6#MA0286.1-50.01453516.918730.9976355ACTGCTAACGTTACGTCAT-
RGT1#MA0367.100.01552747.391030.99763510ACTGCTAACGAATTTTTCCGG+
HLF#MA0043.1-30.017318.239560.9976357ACTGCTAACGGGTTACGCAATT+
MIZF#MA0131.1-50.01861448.860430.9976355ACTGCTAACGTAACGTCCGC+
CEP3#MA0282.1-40.01899289.040590.9976356ACTGCTAACGTTTCCGAG-
CREB1#MA0018.100.0196519.353890.99763510ACTGCTAACGCCTGGTGACGTC+
UPC2#MA0411.1-40.01972999.391410.9976356ACTGCTAACGTATACGA+