MacroAPE 1083:5-GCTTSYTGTTTW
From FANTOM5_SSTAR
Full Name: 5-GCTTSYTGTTTW,CNhs13238,BestGuess:SPIB_f1_HM09(0.586435832002115),T:131.0(5.05%),B:636.6(1.45%),P:1e-32
Motif matrix | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
Target_ID | Optimal_offset | p-value | E-value | q-value | Overlap | Query consensus | Target consensus | Orientation |
---|---|---|---|---|---|---|---|---|
IXR1#MA0323.1 | 4 | 0.000562709 | 0.267849 | 0.535699 | 11 | GCTTGCTGTTTT | CCCCGCTTCCGGCTT | - |
mirr#MA0233.1 | -6 | 0.00466728 | 2.22163 | 1 | 5 | GCTTGCTGTTTT | TGTTT | - |
Foxd3#MA0041.1 | 0 | 0.00606569 | 2.88727 | 1 | 12 | GCTTGCTGTTTT | GAATGTTTGTTT | + |
HCM1#MA0317.1 | -5 | 0.00901813 | 4.29263 | 1 | 7 | GCTTGCTGTTTT | TTGTTTAT | - |
ara#MA0210.1 | -6 | 0.00909973 | 4.33147 | 1 | 5 | GCTTGCTGTTTT | TGTTA | - |
br_Z3#MA0012.1 | -1 | 0.0103018 | 4.90367 | 1 | 11 | GCTTGCTGTTTT | CTTTTAGTTTA | - |
RUNX1#MA0002.2 | 0 | 0.0126487 | 6.02078 | 1 | 11 | GCTTGCTGTTTT | GTCTGTGGTTT | + |
BRCA1#MA0133.1 | -5 | 0.0209799 | 9.98645 | 1 | 7 | GCTTGCTGTTTT | GTGTTGT | - |
onecut#MA0235.1 | -5 | 0.0209799 | 9.98645 | 1 | 7 | GCTTGCTGTTTT | TTGATTT | + |