Personal tools

MacroAPE 1083:7-GTGTGTGTGT

From FANTOM5_SSTAR

Jump to: navigation, search

Full Name: 7-GTGTGTGTGT,CNhs11797,BestGuess:EGR3_f1_HM09(0.732943158952493),T:348.0(8.45%),B:1816.2(4.10%),P:1e-34

Motif matrix
POACGT
10.3486.612325.3815.66
233.0674.4720.348240.12
30.34812.18335.1240.348
413.9295.70.348238.032
50.3485.22342.0840.348
633.0658.8120.348255.78
70.34816.008331.2960.348
811.83265.4240.348270.396
91.7415.66330.2520.348
1036.5479.6920.348231.42

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

RAP1#MA0359.110.004278092.0363719GTGTGTGTGTTGTATGGGTG-
Arnt::Ahr#MA0006.1-10.005094762.425116GTGTGTGTGTTGCGTG+
Egr1#MA0162.110.00574322.73376110GTGTGTGTGTTGCGTGGGCGT+
AFT2#MA0270.1-10.01328656.3243818GTGTGTGTGTGGGGTGTG-
z#MA0255.100.01691418.05112110GTGTGTGTGTTTGAGTGATT+
FOXI1#MA0042.100.01853448.82237110GTGTGTGTGTGGATGTTTGTTT+